| 1 | GALAXY |
|---|
| 2 | ====== |
|---|
| 3 | http://galaxyproject.org/ |
|---|
| 4 | |
|---|
| 5 | The latest information about Galaxy is always available via the Galaxy |
|---|
| 6 | website above. |
|---|
| 7 | |
|---|
| 8 | HOW TO START |
|---|
| 9 | ============ |
|---|
| 10 | Galaxy requires Python 2.4, 2.5 or 2.6. To check your python version, run: |
|---|
| 11 | |
|---|
| 12 | % python -V |
|---|
| 13 | Python 2.4.4 |
|---|
| 14 | |
|---|
| 15 | Before starting Galaxy for the first time, please run the setup script: |
|---|
| 16 | |
|---|
| 17 | % sh setup.sh |
|---|
| 18 | |
|---|
| 19 | If setup.sh finishes successfully, you can then proceed to starting Galaxy: |
|---|
| 20 | |
|---|
| 21 | % sh run.sh |
|---|
| 22 | |
|---|
| 23 | Once Galaxy completes startup, you should be able to view Galaxy in your |
|---|
| 24 | browser at: |
|---|
| 25 | |
|---|
| 26 | http://localhost:8080 |
|---|
| 27 | |
|---|
| 28 | You may wish to make changes from the default configuration. This can be done |
|---|
| 29 | in the universe_wsgi.ini file. Tools are configured in tool_conf.xml. Details |
|---|
| 30 | on adding tools can be found on the Galaxy website (linked above). |
|---|
| 31 | |
|---|
| 32 | Not all dependencies are included for the tools provided in the sample |
|---|
| 33 | tool_conf.xml. A full list of external dependencies is available at: |
|---|
| 34 | |
|---|
| 35 | http://bitbucket.org/galaxy/galaxy-central/wiki/ToolDependencies |
|---|