[2] | 1 | <tool id="pbed2ldindepconvert" name="Convert plink pbed to ld reduced format" version="0.01"> |
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| 2 | <!-- <description>__NOT_USED_CURRENTLY_FOR_CONVERTERS__</description> --> |
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| 3 | <!-- Used on the metadata edit page. --> |
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| 4 | <command interpreter="python"> |
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| 5 | pbed_ldreduced_converter.py '$input1.extra_files_path/$input1.metadata.base_name' '60' '55' '0.1' '$output1' '$output1.files_path' 'plink' |
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| 6 | </command> |
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| 7 | <inputs> |
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| 8 | <page> |
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| 9 | <param format="pbed" name="input1" type="data" label="Choose a compressed Plink binary format genotype file"/> |
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| 10 | </page> |
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| 11 | </inputs> |
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| 12 | <outputs> |
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| 13 | <data format="ldindep" name="output1" metadata_source="input1"/> |
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| 14 | </outputs> |
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| 15 | <help> |
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| 16 | </help> |
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| 17 | </tool> |
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| 18 | |
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