""" This script fixes a problem introduced in 0015_tagging.py. MySQL has a name length limit and thus the index "ix_hda_ta_history_dataset_association_id" has to be manually created. """ from sqlalchemy import * from migrate import * import datetime now = datetime.datetime.utcnow # Need our custom types, but don't import anything else from model from galaxy.model.custom_types import * import logging log = logging.getLogger( __name__ ) metadata = MetaData( migrate_engine ) def display_migration_details(): print "" print "This script fixes a problem introduced in 0015_tagging.py. MySQL has a" print "name length limit and thus the index 'ix_hda_ta_history_dataset_association_id'" print "has to be manually created." HistoryDatasetAssociationTagAssociation_table = Table( "history_dataset_association_tag_association", metadata, Column( "history_dataset_association_id", Integer, ForeignKey( "history_dataset_association.id" ), index=True ), Column( "tag_id", Integer, ForeignKey( "tag.id" ), index=True ), Column( "user_tname", TrimmedString(255), index=True), Column( "value", TrimmedString(255), index=True), Column( "user_value", TrimmedString(255), index=True) ) def upgrade(): display_migration_details() metadata.reflect() i = Index( "ix_hda_ta_history_dataset_association_id", HistoryDatasetAssociationTagAssociation_table.c.history_dataset_association_id ) try: i.create() except Exception, e: print str(e) log.debug( "Adding index 'ix_hdata_history_dataset_association_id' to table 'history_dataset_association_tag_association' table failed: %s" % str( e ) ) def downgrade(): metadata.reflect() i = Index( "ix_hda_ta_history_dataset_association_id", HistoryDatasetAssociationTagAssociation_table.c.history_dataset_association_id ) try: i.drop() except Exception, e: print str(e) log.debug( "Removing index 'ix_hdata_history_dataset_association_id' to table 'history_dataset_association_tag_association' table failed: %s" % str( e ) )