[2] | 1 | <%inherit file="/base.mako"/> |
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| 2 | <%namespace file="/message.mako" import="render_msg" /> |
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| 3 | |
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| 4 | %if message: |
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| 5 | ${render_msg( message, status )} |
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| 6 | %endif |
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| 7 | |
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| 8 | <% states_list = request_type.states %> |
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| 9 | |
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| 10 | <h2>Sequencer Configuration "${request_type.name}"</h2> |
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| 11 | |
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| 12 | <div class="toolForm"> |
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| 13 | <div class="toolFormTitle">Sequencer configuration information</div> |
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| 14 | <form name="view_request_type" action="${h.url_for( controller='requests_admin', action='create_request_type', rt_id=trans.security.encode_id( request_type.id ))}" method="post" > |
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| 15 | <div class="form-row"> |
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| 16 | <label>Name</label> |
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| 17 | ${request_type.name} |
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| 18 | <div style="clear: both"></div> |
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| 19 | </div> |
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| 20 | <div class="form-row"> |
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| 21 | <label>Description</label> |
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| 22 | ${request_type.desc} |
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| 23 | <div style="clear: both"></div> |
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| 24 | </div> |
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| 25 | <div class="form-row"> |
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| 26 | <label> |
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| 27 | Request Form definition |
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| 28 | </label> |
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| 29 | ${request_type.request_form.name} |
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| 30 | </div> |
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| 31 | <div class="form-row"> |
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| 32 | <label> |
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| 33 | Sample Form definition |
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| 34 | </label> |
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| 35 | ${request_type.sample_form.name} |
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| 36 | </div> |
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| 37 | <div class="toolFormTitle">Possible sample states</div> |
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| 38 | %for element_count, state in enumerate(states_list): |
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| 39 | <div class="form-row"> |
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| 40 | <label>${1+element_count}. ${state.name}</label> |
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| 41 | ${state.desc} |
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| 42 | </div> |
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| 43 | <div style="clear: both"></div> |
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| 44 | %endfor |
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| 45 | <div class="toolFormTitle">Sequencer information</div> |
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| 46 | <div class="form-row"> |
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| 47 | This information is only needed for transferring data from sequencer to Galaxy |
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| 48 | </div> |
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| 49 | <div class="form-row"> |
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| 50 | <label>Hostname or IP Address:</label> |
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| 51 | <input type="text" name="host" value="${request_type.datatx_info['host']}" size="40"/> |
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| 52 | </div> |
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| 53 | <div class="form-row"> |
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| 54 | <label>Username:</label> |
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| 55 | <input type="text" name="username" value="${request_type.datatx_info['username']}" size="40"/> |
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| 56 | </div> |
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| 57 | <div class="form-row"> |
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| 58 | <label>Password:</label> |
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| 59 | <input type="password" name="password" value="${request_type.datatx_info['password']}" size="40"/> |
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| 60 | </div> |
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| 61 | <div class="form-row"> |
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| 62 | <label>Data directory:</label> |
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| 63 | <input type="text" name="data_dir" value="${request_type.datatx_info.get('data_dir', '')}" size="40"/> |
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| 64 | </div> |
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| 65 | <div class="form-row"> |
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| 66 | <label>Add experiment name and the sample name to the dataset name?</label> |
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| 67 | ${rename_dataset_select_field.get_html()} |
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| 68 | <div class="toolParamHelp" style="clear: both;"> |
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| 69 | The datasets are renamed by prepending the experiment name and the sample name to the dataset name. <br/>This |
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| 70 | makes sure that dataset names remain unique in Galaxy even when they have the |
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| 71 | same name in the sequencer. |
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| 72 | </div> |
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| 73 | </div> |
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| 74 | <div class="form-row"> |
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| 75 | <input type="submit" name="save_changes" value="Save changes"/> |
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| 76 | </div> |
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| 77 | </form> |
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| 78 | </div> |
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