[2] | 1 | <%inherit file="/base.mako"/> |
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| 2 | <%namespace file="/message.mako" import="render_msg" /> |
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| 3 | <%namespace file="/library/common/common.mako" import="render_template_fields" /> |
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| 4 | <% from galaxy import util %> |
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| 5 | |
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| 6 | <%def name="javascripts()"> |
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| 7 | ${parent.javascripts()} |
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| 8 | ${h.js("jquery.autocomplete", "autocomplete_tagging" )} |
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| 9 | </%def> |
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| 10 | |
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| 11 | <%def name="stylesheets()"> |
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| 12 | ${parent.stylesheets()} |
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| 13 | ${h.css( "autocomplete_tagging" )} |
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| 14 | </%def> |
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| 15 | |
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| 16 | %if ldda == ldda.library_dataset.library_dataset_dataset_association: |
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| 17 | <b><i>This is the latest version of this library dataset</i></b> |
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| 18 | %else: |
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| 19 | <font color="red"><b><i>This is an expired version of this library dataset</i></b></font> |
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| 20 | %endif |
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| 21 | <p/> |
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| 22 | |
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| 23 | <ul class="manage-table-actions"> |
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| 24 | <li> |
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| 25 | <a class="action-button" href="${h.url_for( controller='library_common', action='browse_library', cntrller=cntrller, id=library_id, use_panels=use_panels, show_deleted=show_deleted )}"><span>Browse this data library</span></a> |
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| 26 | </li> |
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| 27 | </ul> |
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| 28 | |
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| 29 | %if message: |
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| 30 | ${render_msg( message, status )} |
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| 31 | %endif |
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| 32 | |
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| 33 | <%def name="datatype( ldda, file_formats )"> |
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| 34 | <select name="datatype"> |
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| 35 | %for ext in file_formats: |
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| 36 | %if ldda.ext == ext: |
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| 37 | <option value="${ext}" selected="yes">${ext}</option> |
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| 38 | %else: |
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| 39 | <option value="${ext}">${ext}</option> |
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| 40 | %endif |
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| 41 | %endfor |
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| 42 | </select> |
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| 43 | </%def> |
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| 44 | |
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| 45 | %if ( trans.user_is_admin() and cntrller=='library_admin' ) or trans.app.security_agent.can_modify_library_item( current_user_roles, ldda.library_dataset ): |
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| 46 | <div class="toolForm"> |
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| 47 | <div class="toolFormTitle">Edit attributes of ${ldda.name}</div> |
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| 48 | <div class="toolFormBody"> |
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| 49 | <form name="edit_attributes" action="${h.url_for( controller='library_common', action='ldda_edit_info', cntrller=cntrller, library_id=library_id, folder_id=trans.security.encode_id( ldda.library_dataset.folder.id ), use_panels=use_panels, show_deleted=show_deleted, )}" method="post"> |
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| 50 | <input type="hidden" name="id" value="${trans.security.encode_id( ldda.id )}"/> |
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| 51 | <div class="form-row"> |
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| 52 | <label>Name:</label> |
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| 53 | <input type="text" name="name" value="${ldda.name}" size="40"/> |
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| 54 | <div style="clear: both"></div> |
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| 55 | </div> |
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| 56 | <div class="form-row"> |
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| 57 | <label>Info:</label> |
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| 58 | <input type="text" name="info" value="${ldda.info}" size="40"/> |
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| 59 | <div style="clear: both"></div> |
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| 60 | </div> |
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| 61 | <div class="form-row"> |
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| 62 | <label>Message:</label> |
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| 63 | %if ldda.message: |
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| 64 | <textarea name="message" rows="3" cols="35">${ldda.message}</textarea> |
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| 65 | %else: |
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| 66 | <textarea name="message" rows="3" cols="35"></textarea> |
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| 67 | %endif |
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| 68 | <div class="toolParamHelp" style="clear: both;"> |
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| 69 | This information will be displayed in the library browser |
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| 70 | </div> |
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| 71 | <div style="clear: both"></div> |
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| 72 | </div> |
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| 73 | %for name, spec in ldda.metadata.spec.items(): |
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| 74 | %if spec.visible: |
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| 75 | <div class="form-row"> |
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| 76 | <label>${spec.desc}:</label> |
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| 77 | ${ldda.metadata.get_html_by_name( name, trans=trans )} |
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| 78 | <div style="clear: both"></div> |
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| 79 | </div> |
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| 80 | %endif |
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| 81 | %endfor |
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| 82 | <div class="form-row"> |
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| 83 | <input type="submit" name="save" value="Save"/> |
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| 84 | </div> |
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| 85 | </form> |
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| 86 | <form name="auto_detect" action="${h.url_for( controller='library_common', action='ldda_edit_info', cntrller=cntrller, library_id=library_id, folder_id=trans.security.encode_id( ldda.library_dataset.folder.id ), use_panels=use_panels, show_deleted=show_deleted, )}" method="post"> |
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| 87 | <div class="form-row"> |
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| 88 | <input type="hidden" name="id" value="${trans.security.encode_id( ldda.id )}"/> |
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| 89 | <input type="submit" name="detect" value="Auto-detect"/> |
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| 90 | <div class="toolParamHelp" style="clear: both;"> |
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| 91 | This will inspect the dataset and attempt to correct the above column values if they are not accurate. |
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| 92 | </div> |
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| 93 | </div> |
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| 94 | </form> |
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| 95 | </div> |
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| 96 | </div> |
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| 97 | <p/> |
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| 98 | <div class="toolForm"> |
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| 99 | <div class="toolFormTitle">Change data type</div> |
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| 100 | <div class="toolFormBody"> |
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| 101 | %if ldda.datatype.allow_datatype_change: |
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| 102 | <form name="change_datatype" action="${h.url_for( controller='library_common', action='ldda_edit_info', cntrller=cntrller, library_id=library_id, folder_id=trans.security.encode_id( ldda.library_dataset.folder.id ), use_panels=use_panels, show_deleted=show_deleted, )}" method="post"> |
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| 103 | <div class="form-row"> |
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| 104 | <input type="hidden" name="id" value="${trans.security.encode_id( ldda.id )}"/> |
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| 105 | <label>New Type:</label> |
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| 106 | ${datatype( ldda, file_formats )} |
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| 107 | <div class="toolParamHelp" style="clear: both;"> |
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| 108 | This will change the datatype of the existing dataset |
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| 109 | but <i>not</i> modify its contents. Use this if Galaxy |
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| 110 | has incorrectly guessed the type of your dataset. |
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| 111 | </div> |
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| 112 | <div style="clear: both"></div> |
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| 113 | </div> |
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| 114 | <div class="form-row"> |
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| 115 | <input type="submit" name="change" value="Save"/> |
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| 116 | </div> |
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| 117 | </form> |
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| 118 | %else: |
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| 119 | <div class="form-row"> |
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| 120 | <div class="warningmessagesmall">${_('Changing the datatype of this dataset is not allowed.')}</div> |
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| 121 | </div> |
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| 122 | %endif |
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| 123 | </div> |
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| 124 | </div> |
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| 125 | <p/> |
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| 126 | %else: |
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| 127 | <div class="toolForm"> |
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| 128 | <div class="toolFormTitle">View information about ${ldda.name}</div> |
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| 129 | <div class="toolFormBody"> |
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| 130 | <div class="form-row"> |
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| 131 | <label>Name:</label> |
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| 132 | ${ldda.name} |
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| 133 | <div style="clear: both"></div> |
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| 134 | </div> |
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| 135 | <div class="form-row"> |
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| 136 | <label>Info:</label> |
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| 137 | ${ldda.info} |
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| 138 | <div style="clear: both"></div> |
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| 139 | </div> |
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| 140 | <div class="form-row"> |
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| 141 | <label>Data Format:</label> |
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| 142 | ${ldda.ext} |
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| 143 | <div style="clear: both"></div> |
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| 144 | </div> |
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| 145 | %for name, spec in ldda.metadata.spec.items(): |
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| 146 | %if spec.visible: |
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| 147 | <div class="form-row"> |
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| 148 | <label>${spec.desc}:</label> |
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| 149 | ${ldda.metadata.get( name )} |
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| 150 | <div style="clear: both"></div> |
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| 151 | </div> |
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| 152 | %endif |
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| 153 | %endfor |
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| 154 | </div> |
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| 155 | </div> |
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| 156 | %endif |
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| 157 | %if widgets: |
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| 158 | ${render_template_fields( cntrller=cntrller, item_type='ldda', library_id=library_id, widgets=widgets, widget_fields_have_contents=widget_fields_have_contents, info_association=info_association, inherited=inherited, folder_id=trans.security.encode_id( ldda.library_dataset.folder.id ), ldda_id=trans.security.encode_id( ldda.id ) )} |
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| 159 | %endif |
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