| [2] | 1 | ##maf version=1 |
|---|
| 2 | a score=121487.000000 |
|---|
| 3 | s hg17.chr7 127471195 331 + 158628139 gtttgccatcttttgctgctctagggaatccagcagctgtcaccatgtaaacaagcccaggctagaccaGTTACCCTCATC---ATCTTAGCTGATAGCCAGCCAGCCACCACAGGCAtgagtcaggccatattgctggacccacagaattatgagctaaataaatagtcttgggttaagccactaagttttaggcatagtgtgttatgtaTCTCACAAACATATAAGACTGTGTGTTTGTTGACTGGAGGAAGAGATGCTATAAAGACCACCTTTTAAAACTTCCCAAATACTGCCACTGATGTCCTGATGGAGG-------------------------------------------------------TATGAA---------AACATCCACTAA |
|---|
| 4 | s panTro1.chr6 129885076 331 + 161576975 gtttgccatcttttgctgctcttgggaatccagcagctgtcaccatgtaaacaagcccaggctagaccaGTTACCCTCATC---ATCTTAGCTGATAGCCAGCCAGCCACCACAGGCAtgagtcaggccatattgctggacccacagaattatgagctaaataaatagtcttgggttaagccactaagttttaggcatagtgtgttatgtaTCTCACAAACATATAAGACTGTGTGTTTGTTGACTGGAGGAAGAGATGCTATAAAGACCACCTTTTGAAACTTCCCAAATACTGCCACTGATGTCCTGATGGAGG-------------------------------------------------------TATGAA---------AACATCCACTAA |
|---|
| 5 | i panTro1.chr6 C 0 C 0 |
|---|
| 6 | s rheMac2.chr3 165787989 330 + 196418989 gcttgccatcttttgatgctcttgggaatccagcagctgtcaccat-taaacaagcccaggctagaccaGTTACCCTCATC---ATCTTAGCTGATAGCCAGCCAGCCACCATAGGCAtgagtcaggccatagtgctggacccacagaattatgagctaaataagtagtgttgggttaagtcactaagttttaggcatagtgtgttatgtagcTCACAAACATATAAGACTGTGTGTTTTTTGACTGGAGGAAGAGATGCCATAAAGACCACCTTTTGAAACTTCTCAAATACTGCCATTGATGTGCTGATGGAGG-------------------------------------------------------TATGAA---------AACATCCACTAA |
|---|
| 7 | i rheMac2.chr3 C 0 C 0 |
|---|
| 8 | s rn3.chr4 56178191 282 + 187371129 CTTCACTCTCATTTGCTGTT----------------CTGTCACTATGGAGACAAACACAGGCTAGCCCAGTTACTATCTTGATCACAGCAGCTGT----CAGCTAGCTGCCACTCACAGGAATAAGGCCATACCATT-GATCCACTGAACCTTGATCTAGGAATTTGGC----------------------TGGGGCCAGTTTGCGGTGTCACTCATGA--CTCTAAGATTGTGTGTTTG----CTCCAGGAAGAGACGGCAAGAGGATTACCTTTAAAAGGTTCGG-AGTCTAGCTGTAGACAGCCCAATGGG---------------------------------------------------------TATAAC---------AATACTCACTAA |
|---|
| 9 | i rn3.chr4 C 0 I 3727 |
|---|
| 10 | s mm7.chr6 28984529 357 + 149646834 CTCCACTCTCGTTTGCTGTT----------------CTGTCACCATGGAAACAAACG-AGGGTGGTCCAGTTACTATCTTG---ACTGCAGCTGG----CAGTCAGTTGCCACT--CAGGAATAAGGCTATGCCATT-GATCCACTGAACCGTGATCTGGAAACCTGGCTGTTGTTT-------CAAGCCTTGGGGCCAGTTTGCGGTGTTACTCATGA--CTCTAAGATCGTGTGCTTG----CTGCAGGAAGAGACAGCAAGGGGGTTACATTTAAAAAGCCCCC-AGTTTAGCTATAGGCAGGCCAACAGGTGTAAAAATACTCACTAGTAATGGGCTGAACTCATGGAGGTAGCATTAGTGAGACACTGTAACTGTTTTTTTAAAAATCACTAA |
|---|
| 11 | i mm7.chr6 C 0 C 0 |
|---|
| 12 | e monDom2.scaffold_22 30245538 51850 - 46578359 I |
|---|
| 13 | e echTel1.scaffold_309554 3896 34801 + 42008 I |
|---|
| 14 | e dasNov1.scaffold_60130 12867 0 - 12883 I |
|---|
| 15 | e loxAfr1.scaffold_2979 11430 3597 - 113413 I |
|---|
| 16 | e canFam2.chr14 52842678 4750 - 63938239 I |
|---|
| 17 | e bosTau2.scaffold741 358386 0 + 359342 I |
|---|
| 18 | e oryCun1.scaffold_213837 7852 41067 + 53501 I |
|---|
| 19 | |
|---|
| 20 | a score=20323.000000 |
|---|
| 21 | s hg17.chr7 127471526 58 + 158628139 AATTTGTGGTTTATTCATTTTTCATTATTTTGTTTAAGGAGGTCTATAGTGGAAGAGG |
|---|
| 22 | s mm7.chr6 28984886 54 + 149646834 ----AACGTTTCATTGATTGCTCATCATTTAAAAAAAGAAATTCCTCAGTGGAAGAGG |
|---|
| 23 | i mm7.chr6 C 0 I 5774 |
|---|
| 24 | s rheMac2.chr3 165788319 58 + 196418989 AATTTGTGGTTTATTTATTTTTCATTATTTTGTTTAAGGAGGTCTATAGTGGAAGAGG |
|---|
| 25 | i rheMac2.chr3 C 0 C 0 |
|---|
| 26 | s panTro1.chr6 129885407 58 + 161576975 AATTTGTGGTTTATTCGTTTTTCATTATTTTGTTTAAGGAGGTCTATAGTGGAAGAGG |
|---|
| 27 | i panTro1.chr6 C 0 C 0 |
|---|
| 28 | e monDom2.scaffold_22 30245538 51850 - 46578359 I |
|---|
| 29 | e echTel1.scaffold_309554 3896 34801 + 42008 I |
|---|
| 30 | e dasNov1.scaffold_60130 12867 0 - 12883 I |
|---|
| 31 | e loxAfr1.scaffold_2979 11430 3597 - 113413 I |
|---|
| 32 | e canFam2.chr14 52842678 4750 - 63938239 I |
|---|
| 33 | e rn3.chr4 56178473 3727 + 187371129 I |
|---|
| 34 | e bosTau2.scaffold741 358386 0 + 359342 I |
|---|
| 35 | e oryCun1.scaffold_213837 7852 41067 + 53501 I |
|---|
| 36 | |
|---|
| 37 | a score=85620.000000 |
|---|
| 38 | s hg17.chr7 127471584 104 + 158628139 GAGATATTT-GGggaaatttt-gtatagactagctt--tcacgatgttagggaattattattgtgtgataatggtcttgcagttac-acagaaattcttcctta-ttttt |
|---|
| 39 | s panTro1.chr6 129885465 104 + 161576975 GAGACATTT-GGggaaatttt-gtatagactagctt--tcacgatgttagggagttattattgtgtgataatggtcttgcagttac-acagaaattcttcctta-ttttt |
|---|
| 40 | i panTro1.chr6 C 0 C 0 |
|---|
| 41 | s rheMac2.chr3 165788377 105 + 196418989 GAGATATTT-GGggaaatttg-gtatagactagctt--tcatgatgtaagggagttatttttgtgtgataatggccctacagttac-acagaaattcttccttatttttt |
|---|
| 42 | i rheMac2.chr3 C 0 C 0 |
|---|
| 43 | s canFam2.chr14 52847428 108 - 63938239 gagatattt-gggggaatttgaatgtagtgttgctcttttgtgatgctaagaaattataattgtctgatgatagtctcgtggttatgggggaaatgcttcctta-ttttt |
|---|
| 44 | i canFam2.chr14 I 4750 I 198 |
|---|
| 45 | s bosTau2.chr4 19312415 103 - 69556449 -agacattg-ggtaaaattcaaatgcagactagctc----atgatgttaaagaattactcttgtgtggtaatggtcttgtgatagagatagaaatgcttcctta-ttttt |
|---|
| 46 | i bosTau2.chr4 M 120077 I 1 |
|---|
| 47 | s rn3.chr4 56182200 95 + 187371129 ----TATTTGGGGGAAATATG-ATGTGCA----CTT--CCATGATCTTAAAGAATTGCTACTGTTTGATAGTGATCTTATGGTTAA-ATAAAAAAAAT--CTTA-GTTGT |
|---|
| 48 | i rn3.chr4 I 3727 C 0 |
|---|
| 49 | s dasNov1.scaffold_256527 298 94 + 1837 GAGACATTT-GGAGAAATTTG-----------Aatt--tcatgatgttaaggaattacttttgtatgatgatggtcttgtggctat-gtagaatttcttccgtg-tttta |
|---|
| 50 | i dasNov1.scaffold_256527 n 0 C 0 |
|---|
| 51 | e monDom2.scaffold_22 30245538 51850 - 46578359 I |
|---|
| 52 | e echTel1.scaffold_309554 3896 34801 + 42008 I |
|---|
| 53 | e loxAfr1.scaffold_2979 11430 3597 - 113413 I |
|---|
| 54 | e mm7.chr6 28984940 5774 + 149646834 I |
|---|
| 55 | e oryCun1.scaffold_213837 7852 41067 + 53501 I |
|---|
| 56 | |
|---|
| 57 | a score=113319.000000 |
|---|
| 58 | s hg17.chr7 127471688 183 + 158628139 tgggaagcaccaaagta-------gggataaaatgtcatgatgtgtgcaatacactttaaaatgtttttgccaaaa----------taattaa-------------------------tgaagc--aaatatg---gaaaataataattattaaatctaggt-----gatgggtatattgtagttcactatagtattgcacacttttctgtatgtttaaatttttcattta--------------------------aaaa- |
|---|
| 59 | s panTro1.chr6 129885569 183 + 161576975 tgggaaacaccaaagta-------gggataaaatgtcatgatgtgtgcaatacgctttaaaatatttttgccaaaa----------taattaa-------------------------tgaagc--aaatatg---gaaaataataattattaaatctaggt-----gatgggtatattgtagttcactatagtattgcacacttttctgtatgtttaaaattttcattta--------------------------aaaa- |
|---|
| 60 | i panTro1.chr6 C 0 C 0 |
|---|
| 61 | s rheMac2.chr3 165788482 202 + 196418989 tgggaagcacaaaagta-------gggataaaatgtcatgatgtgtacaatatgctttaaaatatttttgccaaaa----------taattaa-------------------------tgaagc--aaatatg---gaaaataataactgttaaatctaggt-----gttgggtatattgcagttcattatgttattgcacacttttctgtgtgtttaaaattttcatttaaaaatatgttttaaaaatg-------aaaa- |
|---|
| 62 | i rheMac2.chr3 C 0 C 0 |
|---|
| 63 | s rn3.chr4 56182295 194 + 187371129 TAGAAAATACTCAAATATTTAGGGGCGTGACAATGTCACAGTGTCTGCAATTTGCTTTAAAGATTTTT-----AAA----------TATTTAAAAAAGTTTTAATAATTTTGAAAAACTGAAGCTACACTATG---GGAAGTGGTAATTGTTACATATGGGT-----AATAAGTAT-----AATTCGTTATATTAT-------TTTTC------TTAGAATTTTTCATTTG--------------------------AAAA- |
|---|
| 64 | i rn3.chr4 C 0 I 959 |
|---|
| 65 | s bosTau2.chr4 19312519 138 - 69556449 agataaacacttaagtattta---aggatgaaacgccctgatgtttgtaatttgctttagaatattttagccaaaa----------gaattaa-------------------------tgatgc--aaatatg--caaaaagagta--cgttaaacctaa-----------------------------------------------------atttgCGATTttcattta--------------------------aaaa- |
|---|
| 66 | i bosTau2.chr4 I 1 I 19 |
|---|
| 67 | s canFam2.chr14 52847734 160 - 63938239 agacacaaactgaagtattta---aggatgaaatgtcatgatgtttgcaattggctttaaaatattttagccaaaa-----------agtaaa-------------------------tgaagc--AAATATG--GGAAGACAATAATCATTAAATCTAGGT-----GATGCATAC---------------------------TTTTCCATATGTTTGAAATTTTCATTTA--------------------------AAAA- |
|---|
| 68 | i canFam2.chr14 I 198 I 225 |
|---|
| 69 | s dasNov1.scaffold_256527 393 232 + 1837 agacgcatgctgaagcatgta---aggataaaatgtcgtggtgtttgtaatttattctaaaacattttagccaaaaacaaataaataaataaa-------------------------tgaagc--aaatatgggggaaatgtttaattgttaaatctagatttaacacggtatataccgtgcttcattatactagtctctacttttccatgtgtttgaaattttCATTAAAATGTTTGTTTGTTGTCTGTTTTAATGAAAT |
|---|
| 70 | i dasNov1.scaffold_256527 C 0 C 0 |
|---|
| 71 | e monDom2.scaffold_22 30245538 51850 - 46578359 I |
|---|
| 72 | e echTel1.scaffold_309554 3896 34801 + 42008 I |
|---|
| 73 | e loxAfr1.scaffold_2979 11430 3597 - 113413 I |
|---|
| 74 | e mm7.chr6 28984940 5774 + 149646834 I |
|---|
| 75 | e oryCun1.scaffold_213837 7852 41067 + 53501 I |
|---|
| 76 | |
|---|
| 77 | a score=24225.000000 |
|---|
| 78 | s hg17.chr7 127471871 39 + 158628139 actttgagctagacaccaggctatgagcta-ggagcatag |
|---|
| 79 | s rheMac2.chr3 165788684 39 + 196418989 actttgagctagataccaggttatgagcta-ggagcatag |
|---|
| 80 | i rheMac2.chr3 C 0 C 0 |
|---|
| 81 | s panTro1.chr6 129885752 39 + 161576975 actttgagctagacaccaggctatgagcta-ggagcatag |
|---|
| 82 | i panTro1.chr6 C 0 C 0 |
|---|
| 83 | s bosTau2.chr4 19312676 39 - 69556449 tcttcgtgcaacgcacggggctatcaatgt-gggatacag |
|---|
| 84 | i bosTau2.chr4 I 19 C 0 |
|---|
| 85 | s canFam2.chr14 52848119 39 - 63938239 ACATCAtgctagatcctggactatgagctg-ggtatatag |
|---|
| 86 | i canFam2.chr14 I 225 C 0 |
|---|
| 87 | s dasNov1.scaffold_256527 625 40 + 1837 CCTTTGTGCTAGCCACTGGGATGAAAGCTAGGGAACACAG |
|---|
| 88 | i dasNov1.scaffold_256527 C 0 C 0 |
|---|
| 89 | e monDom2.scaffold_22 30245538 51850 - 46578359 I |
|---|
| 90 | e echTel1.scaffold_309554 3896 34801 + 42008 I |
|---|
| 91 | e loxAfr1.scaffold_2979 11430 3597 - 113413 I |
|---|
| 92 | e rn3.chr4 56182489 959 + 187371129 I |
|---|
| 93 | e mm7.chr6 28984940 5774 + 149646834 I |
|---|
| 94 | e oryCun1.scaffold_213837 7852 41067 + 53501 I |
|---|
| 95 | |
|---|
| 96 | a score=94204.000000 |
|---|
| 97 | s hg17.chr7 127471910 164 + 158628139 caatgaccaa----------------------------------------------------------------------------------------------atagactcctaccaa-ctc-aaagaatgcacattctCTG-GGAAACATGTTTCCATTAGGAAGCCTCGAATGCAATGTGACTGTGGTCTCCAGGACCTG-TGTGATCCTGGCTTTTCCTGTTCCCTCCG---CATCATCACTGCAGGTGTGTTTTCCCAAG |
|---|
| 98 | s panTro1.chr6 129885791 164 + 161576975 caatgaccaa----------------------------------------------------------------------------------------------atagactcctaccaa-ctc-aaagaatgcacattctCTG-GGAAACATGTTTCCATTAGGAAGCCTCGAATGCAATGTGACTGTGGTCTCCAGGACATG-TGTGATCCTGGCTTTTCCTGTTCCCTCTG---CATCATCACTGCAGGTGTATTTTCCCAAG |
|---|
| 99 | i panTro1.chr6 C 0 C 0 |
|---|
| 100 | s rheMac2.chr3 165788723 162 + 196418989 caatgaccaa----------------------------------------------------------------------------------------------atagacccctaccga-ctc-aaagaatgtacattctTTG-GGAAACATGTTTCCATCAGAAAATCTCAAATGCAATGTGACTGGGGTCTCCAGGACCTG-TGTGAGCCTGGCTTTTCCTGTTCCCTCCA---CATCATCACTGCAGGTGTATTTTCCC--G |
|---|
| 101 | i rheMac2.chr3 C 0 C 0 |
|---|
| 102 | s mm7.chr6 28990714 161 + 149646834 caaaaaccaa------------------------------------------------------------------------------------------------aaaaACCTATAGC-CTC-ACAGGGTGGGTTGTCTTTG-AGGAACATGCATCCGCTAGAAAGTCCCAAGTACACTATGACAGTTG--CCCAGGCCCCGCCTTAAACCTGGTTTTCCTGGTTTCTTTCA---CATCATTACCACGAATATATTTCCTCAAG |
|---|
| 103 | i mm7.chr6 I 5774 C 0 |
|---|
| 104 | s rn3.chr4 56183448 257 + 187371129 --ATGACCAATATACACTGTTTACATGTATAGCATTGTGAATGGAGACATAAAAAGATAATCTAGCTTTGTGCTAGGTAGGTGCTGAGCTCTTAACAGTGCTGGGCAGAAACCTATAAC-CTC-ACAGGGTGGGTTGTCTTTG-AGGAGCGTGCTAACCCTAGGAAGTCTCAAATACAATGTGATGGTTGCCCCCAGGCACCACCTTGAACCTGGTCTTCCTGGTTTCTTTCA---CACCATTACCACAAATACATTTTCTCAGG |
|---|
| 105 | i rn3.chr4 I 959 C 0 |
|---|
| 106 | s bosTau2.chr4 19312715 168 - 69556449 atgtgaacaa---------------------------------------------------------------------------------------------aacggacccgtgtgggactcggcggagcacacagattttgcgggagCACGTTCCCGTTAGGAAGTCTCTGATGCAATACGACCGGTGCCTTCAGGACCTG-TG--AGGCTGACTTTCCTTA-CCCCTCCACACCATCATCAAGGCAGGTGTGATTTTCCAGG |
|---|
| 107 | i bosTau2.chr4 C 0 I 12 |
|---|
| 108 | s canFam2.chr14 52848158 168 - 63938239 cagtgaacaa---------------------------------------------------------------------------------------------aacagagccctgcagt-cttgatggagcacacaacctttg-gggaaCATGTTTCCATAAGAAAGTCTCCAATGTGATCTGA-TGGTGCCGCCAGGACCTA-TGTCAGCCTACCGTTCCATGTCCCCTCCACACCATCATCACTGCAGGTGTGTTTTCCCACA |
|---|
| 109 | i canFam2.chr14 C 0 C 0 |
|---|
| 110 | s dasNov1.scaffold_256527 665 121 + 1837 CAGTGAGCAA-----------------------------------------------------------------------------------------------CAGCCTGGCTCCGT-CC--GGGGGCCGCTCAGCAGCTC-GGGAGCGTGGAGACG---GGAAGTCTGTCACGCGATGCG-----------CTGGGCCCG------------CTGTTCCCGCCCCCCTCC---CCCC----------------TTTCCCAAG |
|---|
| 111 | i dasNov1.scaffold_256527 C 0 C 0 |
|---|
| 112 | e monDom2.scaffold_22 30245538 51850 - 46578359 I |
|---|
| 113 | e echTel1.scaffold_309554 3896 34801 + 42008 I |
|---|
| 114 | e loxAfr1.scaffold_2979 11430 3597 - 113413 I |
|---|
| 115 | e oryCun1.scaffold_213837 7852 41067 + 53501 I |
|---|
| 116 | |
|---|
| 117 | a score=97835.000000 |
|---|
| 118 | s hg17.chr7 127472074 184 + 158628139 TTTTAAA------CATTTACCTTCCCAGTGGCCTTGCGTCTAGAGGAATCCCTGTATAGTGGT-ACATGAATATAACACATAACAAA-AATCATCTCTATGGTGTGTGTTGTTCCTGGGGTTCAattcagcaaatttt-ccc-tgggcacccatgtgttcttggcactggaaaagtaccgggactgaaacagtt |
|---|
| 119 | s panTro1.chr6 129885955 184 + 161576975 TTTTAAA------CATTTACCTTCCCAGTGGCCTTGCGTCTAGAGGAATCCCTGTATAGTGGT-ACATGAATATAACACATAACAAA-AATCATCTCTATGGTGTGTGTTGTTCCTGGGGTTCAattcagcaaatttt-tcc-tgggcacccatgtgttcttggcactggaaaagtaccgggactgaaacagtt |
|---|
| 120 | i panTro1.chr6 C 0 C 0 |
|---|
| 121 | s rheMac2.chr3 165788885 184 + 196418989 TTTTAAA------CATTTACTCTCCCAGTAGCCTTGCATCTCGAGGAATCCCTGTATAGTGGT-ACATGAATATAACACATAACAAA-AATCATCTGTACGGTGTGTGTTGTTCCTGGGGTTCAattcagcaaatttt-tcc-tgggcacccctgtgttcttggcactggaaaagtaccaggacttaaatagta |
|---|
| 122 | i rheMac2.chr3 C 0 C 0 |
|---|
| 123 | s mm7.chr6 28990875 150 + 149646834 TTTAAAGAAAGTACCCCCTCCTTTCCAGT-GCCTCAAATCTAGAAGAATATTCATAGTGAAGT-GC------------------------ACAGCCGGGTGGTGCATGGTA-ATCTGGAAGTCACCTCTGCAAATCTT-TCC----------------TGTTGGTGCTGTGAAGGCACCAGGACTTCAAGAGTA |
|---|
| 124 | i mm7.chr6 C 0 C 0 |
|---|
| 125 | s rn3.chr4 56183705 174 + 187371129 TTTAAAAGAAGT-CCCACTCCTTTCCAGT-GCCCTAGATCTAGAAGCACATTCATAATGATGT-ACAC-----TAACCC----------GACAGCTGTGTGGTATATGGTA-TCCCGGAAGTCACCTCAGCAAACCTT-TCCCGGGGAACCTACATGGTGTTGGTGCTGTGAAGGTACCAGGTTGTCAAGGGTA |
|---|
| 126 | i rn3.chr4 C 0 C 0 |
|---|
| 127 | s canFam2.chr14 52848326 170 - 63938239 TTTTAAA------TATCTGC-TTCCCGGTGGCCTTGAGTCTAGAGGAGTCCCCCCACTATGGTGGCACTAATACTGAAGGTCAGAAATAATCAGTTCTGTGGTGCATGTTGCCCCTGAGGTTCTGTTCGGGAAACTTC-TTC-TGAGCAC----ATGCACCTGGCACTGCAAACGTACCAGGA----------- |
|---|
| 128 | i canFam2.chr14 C 0 I 195 |
|---|
| 129 | s dasNov1.scaffold_256527 786 178 + 1837 TTTTAAA------AATTTACCTTCCCAGTGGCGGTGAATCCGGAGGAATACGGAAACTGGGGC-GCACTACCATGACACGTGTCAAA-AATCAGTTCCGTGGTCCGTGGAGGGCCTGGGGTTC------GAAAATCTTGTCC-CGAGCACCCCCGTGCGCCTGGCACCGCGACAGTGACAGGACTGAAGCGTG- |
|---|
| 130 | i dasNov1.scaffold_256527 C 0 C 0 |
|---|
| 131 | e monDom2.scaffold_22 30245538 51850 - 46578359 I |
|---|
| 132 | e echTel1.scaffold_309554 3896 34801 + 42008 I |
|---|
| 133 | e loxAfr1.scaffold_2979 11430 3597 - 113413 I |
|---|
| 134 | e bosTau2.chr4 19312883 12 - 69556449 I |
|---|
| 135 | e oryCun1.scaffold_213837 7852 41067 + 53501 I |
|---|
| 136 | |
|---|
| 137 | a score=14531.000000 |
|---|
| 138 | s hg17.chr7 127472258 22 + 158628139 gatggccca-atccctgtcctct- |
|---|
| 139 | s panTro1.chr6 129886139 22 + 161576975 gatggccca-atccctgtcctct- |
|---|
| 140 | i panTro1.chr6 C 0 C 0 |
|---|
| 141 | s rheMac2.chr3 165789069 22 + 196418989 gatggccca-atccctgtcctct- |
|---|
| 142 | i rheMac2.chr3 C 0 C 0 |
|---|
| 143 | s mm7.chr6 28991025 23 + 149646834 AATGGCAGAGGGCTCTGTTCTCT- |
|---|
| 144 | i mm7.chr6 C 0 I 471 |
|---|
| 145 | s rn3.chr4 56183879 23 + 187371129 AATGGCAGAGGCCCCTGTTCTCT- |
|---|
| 146 | i rn3.chr4 C 0 C 0 |
|---|
| 147 | s canFam2.chr14 52848691 22 - 63938239 GGAGACTTG-ATGCCTGCCTTCC- |
|---|
| 148 | i canFam2.chr14 I 195 I 3 |
|---|
| 149 | s dasNov1.scaffold_256527 964 23 + 1837 GACGGCCAG-ACCTCTGCCCTCGG |
|---|
| 150 | i dasNov1.scaffold_256527 C 0 C 0 |
|---|
| 151 | e monDom2.scaffold_22 30245538 51850 - 46578359 I |
|---|
| 152 | e echTel1.scaffold_309554 3896 34801 + 42008 I |
|---|
| 153 | e loxAfr1.scaffold_2979 11430 3597 - 113413 I |
|---|
| 154 | e bosTau2.chr4 19312883 12 - 69556449 I |
|---|
| 155 | e oryCun1.scaffold_213837 7852 41067 + 53501 I |
|---|
| 156 | |
|---|
| 157 | a score=182774.000000 |
|---|
| 158 | s hg17.chr7 127472280 401 + 158628139 taaaacctaagggaggagaTGGAAAG-GGGCACCCAACCCAGACTGAGAGACAGGAATTAGCTGCAAGGGGAACTAGGAAAAGCTTCTTTA---AGGATG--GAGAGGCCCTA-GTGGAATGGGGAGATTCTTCCGGGAGAAGCGATGGATGCACAGTTGGGCATCCCCACAGACGGACTGGAAAGAAAAAAGGCCTGGAGGAATCA------ATGTGC-AATGTATGTGTGTTCCCTGGTTcaagggctgg-gaactttctcta--aagggccaggtagaaaacattttaggctttctaagccaagg---caaaattgaggat-attacatgggtacttatacaacaagaataaacaatt---tacacaa-ttttttgttgacagaattcaaaa---ctttat----agacac---agaaatgcaaatttcctgt |
|---|
| 159 | s panTro1.chr6 129886161 401 + 161576975 taaaacctaagggaggagaTGGAAAG-GGGCACCCAACCCAGACTGAGAGACAGGAATTAGCTGCAAGGGGAACTAGGAAAAGCTTCTTTA---AGGATG--GAGAGACCCTA-GTGGAATGGGGAGATTCTTCCGGGAGAAGCGATGGATGCGCAGTTGGGCATCCCCACAGACGGACTGGAAAGAAAAAAGGCCTGGAGGAATCA------ATGTGC-AATGTATGTGTGTTCCCTGGTTcaagggctgg-gaactttctcta--aagggccaggtagaaaacattttaggctttctaagccaagg---caaaattgaggat-attacatgggtacttatacaacaagaataaacaatt---tacacaa-ttttttgttgacagaattcaaaa---ctttat----agacac---agaaatgtaaatttcctgt |
|---|
| 160 | i panTro1.chr6 C 0 C 0 |
|---|
| 161 | s rheMac2.chr3 165789091 401 + 196418989 taaaacctaatggaggagatggaATG-GGTCACCCAACCCGGACTGAGAGACAGGAATTAGCTGCAAGGGTAACCAGGACAAGCTTCTCTA---ATGATG--GAGAGACCCTA-GTGGAATGGGGAGATTCTTCTGGGAGAAGCGATGGATTCGTAGTTGGGCATCCCCACAGAGGGACTGGAAAGAAAAAAGACCTGGAGGAACCA------ATGTGC-AATGTATGTGTGTTTCCTGGTTcaagggctggcaaactttctcta--aagggccagatagaaaacattttaggctttgtaagccaagg---caaaatcgaggag-attacatgggtacttatacaacaagaataaacaatt---tccacaa--tttttattcacagaattcaaaa---ctttat----agacac---agaaatgtaaatttcctgt |
|---|
| 162 | i rheMac2.chr3 C 0 C 0 |
|---|
| 163 | s rn3.chr4 56183902 317 + 187371129 ------------------------------------GTCCATAGTCAAAG------------------------------AAGCCTCTCAG---ATGGAG--AGCAGGGCCTATGCAAAAGAGGGGGCTTCTGTAGGCAGAAGGGATGGACTAGCCTCCGGACATAGCCATAGAGAGGCTGGCAGGACTGAGACCCAGGAGAAGCCAGCGCAGGTGTGCGGGCGTGTGTATATTTCATAGTTTGCAGGTTGG----------------------------CAAACAATTCCTGCTTTGCAGGCCAAGA---GGAAACTGAAGGTGACCCCGTGAGTGCTTAC---ACAAGAGAAAACAAG-------ACAA-TTTTTGGTTGACCAAATTCAGAA---CTTTATTTGAGGATGC---TAAAGTTTAAATTTCTTTT |
|---|
| 164 | i rn3.chr4 C 0 I 329 |
|---|
| 165 | s canFam2.chr14 52848716 380 - 63938239 TACAGCCTGTGGGCAGAGGTGGGAAGAGGTCACGCAAGCCAGTTGGAATGAGGGGAGTTGGCTGGAAAGGTGACCAGGACAAGCTACTTCAACCAGGAAG--AAGAGACCCCG-GTG----------------CTTGGAGAAGGCCTGATTGAGCAGTCCTGCATGCCCGCCCAC-GACTGGCAGGAATAAAGACCCAGAAGAGCTA------ACGTGC-AATGTA------TTTTCTAGTTCCAgggttggcaaactttctctct-aagggtgggatgataaacattttaggcttttcagaccaaga---ggcgacatcagag-ggtatgtaggt---------acaagagggaaaagttgcccccggaa-ttttttg--gataaaattcaaaa---ctttacttagggatgc---caaaatgtaaacttcatat |
|---|
| 166 | i canFam2.chr14 I 3 C 0 |
|---|
| 167 | s dasNov1.scaffold_256527 987 414 + 1837 CTAAATCTCGCGGAGAAGGTGGAACA-GGTTACCCAAACCCGACCGAG-GAGGCGAGTTG---GAAACGGCGACTGGGACAAGCTCCCTCA---GAGACGGAGAGAGACCCCA-GTGGAAGGGGGGAGAGGCTCTTAGGGAAACGATGGGGGGACCCGCCCGCACCCGCACAGAGGCGCTGGCAGGCACAGCGGCCCCGAGGAGCCC------AGGAGC-AGGGC-TGTGT-TCCCCTGCATcaggggttggcaaactttttctgcaaagggccagatagtaaatattttaggctttgcaaaccaagaagtagaaagggaggcc-attatgtacgtatttatatagcaagagagaacattt---cccacaatttttttattgacagaatttaaaacttctttattgatgaacaccaaagaaacttgaatttcatat |
|---|
| 168 | i dasNov1.scaffold_256527 C 0 C 0 |
|---|
| 169 | e monDom2.scaffold_22 30245538 51850 - 46578359 I |
|---|
| 170 | e echTel1.scaffold_309554 3896 34801 + 42008 I |
|---|
| 171 | e loxAfr1.scaffold_2979 11430 3597 - 113413 I |
|---|
| 172 | e mm7.chr6 28991048 471 + 149646834 I |
|---|
| 173 | e bosTau2.chr4 19312883 12 - 69556449 I |
|---|
| 174 | e oryCun1.scaffold_213837 7852 41067 + 53501 I |
|---|
| 175 | |
|---|
| 176 | a score=14948.000000 |
|---|
| 177 | s hg17.chr7 127472681 34 + 158628139 aattttcccat---gagaactattcttcttttgtttt |
|---|
| 178 | s rheMac2.chr3 165789492 34 + 196418989 aattttcacat---aagaactattcttcttttgtttt |
|---|
| 179 | i rheMac2.chr3 C 0 C 0 |
|---|
| 180 | s panTro1.chr6 129886562 34 + 161576975 aattttcccgt---gagaactattcttcttttgtttt |
|---|
| 181 | i panTro1.chr6 C 0 C 0 |
|---|
| 182 | s canFam2.chr14 52849096 35 - 63938239 aatggtcatgt--ccataactattcttcttttatttt |
|---|
| 183 | i canFam2.chr14 C 0 C 0 |
|---|
| 184 | s dasNov1.scaffold_256527 1401 32 + 1837 aattttcacatatcacgaagtatttttttttt----- |
|---|
| 185 | i dasNov1.scaffold_256527 C 0 n 0 |
|---|
| 186 | e monDom2.scaffold_22 30245538 51850 - 46578359 I |
|---|
| 187 | e echTel1.scaffold_309554 3896 34801 + 42008 I |
|---|
| 188 | e loxAfr1.scaffold_2979 11430 3597 - 113413 I |
|---|
| 189 | e rn3.chr4 56184219 329 + 187371129 I |
|---|
| 190 | e mm7.chr6 28991048 471 + 149646834 I |
|---|
| 191 | e bosTau2.chr4 19312883 12 - 69556449 I |
|---|
| 192 | e oryCun1.scaffold_213837 7852 41067 + 53501 I |
|---|
| 193 | |
|---|
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