[2] | 1 | deletionHoptspot1 [A/C][G/T][A/G][A/G]GT |
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| 2 | deletionHoptspot1rev TG[A/G][A/G][G/T][A/C] |
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| 3 | deletionHoptspot1comp [G/T][A/C][C/T][C/T]CA |
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| 4 | deletionHoptspot1revcomp AC[C/T][C/T][A/C][G/T] |
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| 5 | deletionHoptspot2 [C/T][C/T][C/T]TG |
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| 6 | deletionHoptspot2rev GT[C/T][C/T][C/T] |
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| 7 | deletionHoptspot2comp [A/G][A/G][A/G]AC |
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| 8 | deletionHoptspot2revcomp CA[A/G][A/G][A/G] |
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| 9 | deletionHoptspot3 CAG[A/G] |
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| 10 | deletionHoptspot3rev [A/G]GAC |
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| 11 | deletionHoptspot3comp GTC[C/T] |
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| 12 | deletionHoptspot3revcomp [C/T]CTG |
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| 13 | dnaPolPauseFrameshift1 GAG |
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| 14 | dnaPolPauseFrameshift1comp CTC |
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| 15 | dnaPolPauseFrameshift2 ACG |
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| 16 | dnaPolPauseFrameshift2rev GCA |
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| 17 | dnaPolPauseFrameshift2comp TGC |
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| 18 | dnaPolPauseFrameshift2revcomp CGT |
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| 19 | dnaPolPauseFrameshift3 GC[G/C] |
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| 20 | dnaPolPauseFrameshift3rev [G/C]CG |
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| 21 | dnaPolPauseFrameshift3comp CG[G/C] |
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| 22 | dnaPolPauseFrameshift3revcomp [G/C]GC |
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| 23 | dnaPolPauseFrameshift4 [A/T]GGAG |
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| 24 | dnaPolPauseFrameshift4rev GAGG[A/T] |
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| 25 | dnaPolPauseFrameshift4comp [A/T]CCTC |
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| 26 | dnaPolPauseFrameshift4revcomp CTCC[A/T] |
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| 27 | dnaPolPauseFrameshift5 TCCCCC |
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| 28 | dnaPolPauseFrameshift5rev CCCCCT |
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| 29 | dnaPolPauseFrameshift5comp AGGGGG |
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| 30 | dnaPolPauseFrameshift5revcomp GGGGGA |
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| 31 | dnaPolPauseFrameshift6 CTGGCG |
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| 32 | dnaPolPauseFrameshift6rev GCGGTC |
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| 33 | dnaPolPauseFrameshift6comp GACCGC |
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| 34 | dnaPolPauseFrameshift6revcomp CGCCAG |
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| 35 | dnaPolPauseFrameshift7 ACCC[A/T][A/G] |
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| 36 | dnaPolPauseFrameshift7rev [A/G][A/T]CCCA |
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| 37 | dnaPolPauseFrameshift7comp TGGG[A/T][T/C] |
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| 38 | dnaPolPauseFrameshift7revcomp [T/C][A/T]GGGT |
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| 39 | dnaPolPauseFrameshift8 TTTT |
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| 40 | dnaPolPauseFrameshift8comp AAAA |
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| 41 | dnaPolPauseFrameshift9 TGG[A/C/G/T]GT |
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| 42 | dnaPolPauseFrameshift9rev TG[A/C/G/T]GGT |
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| 43 | dnaPolPauseFrameshift9comp ACC[A/C/G/T]CA |
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| 44 | dnaPolPauseFrameshift9revcomp AC[A/C/G/T]CCA |
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| 45 | dnaPolPauseFrameshift10 ACCCCA |
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| 46 | dnaPolPauseFrameshift10comp TGGGGT |
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| 47 | indelHotspot1 GTAAGT |
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| 48 | indelHotspot1rev TGAATG |
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| 49 | indelHotspot1comp CATTCA |
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| 50 | indelHotspot1revcomp ACTTAC |
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| 51 | insertionHotspot1 AT[A/C][A/C]GCC |
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| 52 | insertionHotspot1rev CCG[A/C][A/C]TA |
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| 53 | insertionHotspot1comp TA[T/G][T/G]CGG |
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| 54 | insertionHotspot1revcomp GGC[T/G][T/G]AT |
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| 55 | insertionHotspot2 TACC[A/G]C |
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| 56 | insertionHotspot2rev C[A/G]CCAT |
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| 57 | insertionHotspot2comp ATGG[T/C]G |
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| 58 | insertionHotspot2revcomp G[T/C]GGTA |
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| 59 | topoisomeraseCleavageSite1 CAT |
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| 60 | topoisomeraseCleavageSite1rev TAC |
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| 61 | topoisomeraseCleavageSite1comp GTA |
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| 62 | topoisomeraseCleavageSite1revcomp ATG |
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| 63 | topoisomeraseCleavageSite2 CT[T/C] |
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| 64 | topoisomeraseCleavageSite2rev [T/C]TC |
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| 65 | topoisomeraseCleavageSite2comp GA[A/G] |
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| 66 | topoisomeraseCleavageSite2revcomp [A/G]AG |
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| 67 | topoisomeraseCleavageSite3 GT[T/C] |
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| 68 | topoisomeraseCleavageSite3rev [T/C]TG |
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| 69 | topoisomeraseCleavageSite3comp CA[A/G] |
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| 70 | topoisomeraseCleavageSite3revcomp [A/G]AC |
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| 71 | topoisomeraseCleavageSite4 [A/G]A[T/G] |
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| 72 | topoisomeraseCleavageSite4rev [T/G]A[A/G] |
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| 73 | topoisomeraseCleavageSite4comp [T/C]T[A/C] |
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| 74 | topoisomeraseCleavageSite4revcomp [A/C]T[T/C] |
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| 75 | topoisomeraseCleavageSite5 [T/C]CCTT |
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| 76 | topoisomeraseCleavageSite5rev TTCC[T/C] |
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| 77 | topoisomeraseCleavageSite5comp [A/G]GGAA |
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| 78 | topoisomeraseCleavageSite5revcomp AAGG[A/G] |
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| 79 | topoisomeraseCleavageSite6 [T/C]TA |
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| 80 | topoisomeraseCleavageSite6rev AT[T/C] |
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| 81 | topoisomeraseCleavageSite6comp [A/G]AT |
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| 82 | topoisomeraseCleavageSite6revcomp TA[A/G] |
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| 83 | translinTarget1 ATGCAG |
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| 84 | translinTarget1rev GACGTA |
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| 85 | translinTarget1comp TACGTC |
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| 86 | translinTarget1revcomp CTGCAT |
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| 87 | translinTarget2 GCCC[A/T][G/C][G/C][A/T] |
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| 88 | translinTarget2rev [A/T][G/C][G/C][A/T]CCCG |
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| 89 | translinTarget2comp CGGG[A/T][G/C][G/C][A/T] |
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| 90 | translinTarget2revcomp [A/T][G/C][G/C][A/T]GGGC |
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| 91 | vDjRecombinationSignal1 CACAGTG |
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| 92 | vDjRecombinationSignal1rev GTGACAC |
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| 93 | vDjRecombinationSignal1comp GTGTCAC |
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| 94 | vDjRecombinationSignal1revcomp CACTGTG |
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| 95 | vDjRecombinationSignal2 ACAAAAACC |
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| 96 | vDjRecombinationSignal2rev CCAAAAACA |
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| 97 | vDjRecombinationSignal2comp TGTTTTTGG |
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| 98 | vDjRecombinationSignal2revcomp GGTTTTTGT |
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| 99 | x-likeSite1 CCG |
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| 100 | x-likeSite1rev GCC |
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| 101 | x-likeSite1comp GGC |
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| 102 | x-likeSite1revcomp CGG |
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| 103 | x-likeSite2 GCTGGTGG |
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| 104 | x-likeSite2rev GGTGGTCG |
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| 105 | x-likeSite2comp CGACCACC |
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| 106 | x-likeSite2revcomp CCACCAGC |
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| 107 | x-likeSite3 GGGCAGGA[A/C/G/T]G |
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| 108 | x-likeSite3rev G[A/C/G/T]AGGACGGG |
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| 109 | x-likeSite3comp CCCGTCCT[A/C/G/T]C |
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| 110 | x-likeSite3revcomp C[A/C/G/T]TCCTGCCC |
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| 111 | x-likeSite4 GC[A/T]GG[A/T]GG |
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| 112 | x-likeSite4rev GG[A/T]GG[A/T]CG |
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| 113 | x-likeSite4comp CG[A/T]CC[A/T]CC |
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| 114 | x-likeSite4revcomp CC[A/T]CC[A/T]GC |
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| 115 | x-likeSite5 GGAGGTGGGCAGGA[A/G]G |
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| 116 | x-likeSite5rev G[A/G]AGGACGGGTGGAGG |
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| 117 | x-likeSite5comp CCTCCACCCGTCCT[T/C]C |
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| 118 | x-likeSite5revcomp C[T/C]TCCTGCCCACCTCC |
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| 119 | x-likeSite6 AGAGGTGGGCAGGTGG |
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| 120 | x-likeSite6rev GGTGGACGGGTGGAGA |
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| 121 | x-likeSite6comp TCTCCACCCGTCCACC |
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| 122 | x-likeSite6revcomp CCACCTGCCCACCTCT |
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