root/galaxy-central/tools/emboss_5/emboss_banana.pl
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リビジョン 2, 444 bytes (コミッタ: hatakeyama, 14 年 前) |
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Rev | 行番号 | |
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[2] | 1 | #! /usr/bin/perl -w |
2 | use strict; | |
3 | ||
4 | my $cmd_string = join (" ",@ARGV); | |
5 | #my $cmd_string = "/home/djb396/temp/emboss/bin/banana -sequence /home/djb396/universe-prototype/test.fasta -outfile result.txt -graph png -goutfile results -auto"; | |
6 | my $results = `$cmd_string`; | |
7 | my @files = split("\n",$results); | |
8 | foreach my $thisLine (@files) | |
9 | { | |
10 | if ($thisLine =~ /Created /i) | |
11 | { | |
12 | $thisLine =~ /[\w|\.]+$/; | |
13 | $thisLine =$&; | |
14 | print "outfile: $thisLine\n"; | |
15 | } | |
16 | } |
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