[2] | 1 | <tool id="EMBOSS: cusp17" name="cusp" version="5.0.0">
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| 2 | <description>Create a codon usage table</description>
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| 3 | <requirements><requirement type="package" version="5.0.0">emboss</requirement></requirements>
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| 4 | <command>cusp -sequence $input1 -outfile $out_file1 -auto</command>
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| 5 | <inputs>
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| 6 | <param format="fasta" name="input1" type="data">
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| 7 | <label>On query</label>
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| 8 | </param>
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| 9 | </inputs>
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| 10 | <outputs>
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| 11 | <data format="cusp" name="out_file1" />
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| 12 | </outputs> |
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| 13 | <tests> |
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| 14 | <test> |
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| 15 | <param name="input1" value="2.fasta"/> |
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| 16 | <output name="out_file1" file="emboss_cusp_out.cusp"/> |
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| 17 | </test> |
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| 18 | </tests>
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| 19 | <help> |
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| 20 | .. class:: warningmark |
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| 21 | |
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| 22 | The input dataset needs to be sequences. |
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| 23 | |
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| 24 | ----- |
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| 25 | |
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| 26 | You can view the original documentation here_. |
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| 27 | |
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| 28 | .. _here: http://emboss.sourceforge.net/apps/release/5.0/emboss/apps/cusp.html |
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| 29 | </help> |
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| 30 | </tool> |
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