Draws linear maps of DNA constructs emboss lindna -infile $input1 -graphout png -goutfile $out_file1 -ruler $ruler -blocktype $blocktype -maxgroups $maxgroups -maxlabels $maxlabels -intersymbol $intersymbol -intercolour $intercolour -interticks $interticks -gapsize $gapsize -ticklines $ticklines -textheight $textheight -textlength $textlength -margin $margin -tickheight $tickheight -blockheight $blockheight -rangeheight $rangeheight -gapgroup $gapgroup -postext $postext -auto Sequences Draw a ruler Yes No Type of blocks Filled blocks Open blocks Black border Maximum number of groups Maximum number of labels Type of blocks Straight Colour of junctions between blocks Red Black Yellow Green Aquamarine Pink Wheat Grey Brown Blue Blue-violet Cyan Turquoise Magenta Salmon White Horizontal junctions between ticks No Yes Interval between ticks in the ruler Vertical lines at the ruler's ticks No Yes Height of text. Enter a number <1.0 or >1.0 to decrease or increase the size, respectively Length of text. Enter a number <1.0 or >1.0 to decrease or increase the size, respectively Width of left margin. This is the region left to the groups where the names of the groups are displayed. Enter a number <1.0 or >1.0 to decrease or increase the size, respectively Height of ticks. Enter a number <1.0 or >1.0 to decrease or increase the size, respectively Height of blocks. Enter a number <1.0 or >1.0 to decrease or increase the size, respectively Height of range ends. Enter a number <1.0 or >1.0 to decrease or increase the size, respectively Space between groups. Enter a number <1.0 or >1.0 to decrease or increase the size, respectively Space between text and ticks, blocks, and ranges. Enter a number <1.0 or >1.0 to decrease or increase the size, respectively You can view the original documentation here_. .. _here: http://emboss.sourceforge.net/apps/release/5.0/emboss/apps/lindna.html