Finds all exact matches of a given size between 2 sequencesembosswordmatch -asequence $input1 -bsequence $input2 -outfile $out_file1 -aoutfeat $out_file2 -boutfeat $out_file3 -wordsize "$wordsize" -aformat3 $out_format1 -offormat4 $out_format2
-offormat5 $out_format3 -auto
.. class:: warningmark
The input datasets need to be sequences.
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You can view the original documentation here_.
.. _here: http://emboss.sourceforge.net/apps/release/5.0/emboss/apps/wordmatch.html