[2] | 1 | <tool id="addValue" name="Add column"> |
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| 2 | <description>to an existing query</description> |
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| 3 | <command interpreter="perl">fixedValueColumn.pl $input $out_file1 "$exp" $iterate</command> |
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| 4 | <inputs> |
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| 5 | <param name="exp" size="20" type="text" value="1" label="Add this value"/> |
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| 6 | <param format="tabular" name="input" type="data" label="to Query" help="Query missing? See TIP below" /> |
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| 7 | <param name="iterate" type="select" label="Iterate?"> |
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| 8 | <option value="no">NO</option> |
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| 9 | <option value="yes">YES</option> |
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| 10 | </param> |
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| 11 | </inputs> |
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| 12 | <outputs> |
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| 13 | <data format="input" name="out_file1" metadata_source="input"/> |
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| 14 | </outputs> |
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| 15 | <tests> |
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| 16 | <test> |
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| 17 | <param name="exp" value="1"/> |
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| 18 | <param name="input" value="1.bed"/> |
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| 19 | <param name="iterate" value="no"/> |
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| 20 | <output name="out_file1" file="eq-addvalue.dat"/> |
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| 21 | </test> |
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| 22 | </tests> |
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| 23 | <help> |
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| 24 | |
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| 25 | .. class:: infomark |
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| 26 | |
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| 27 | **TIP:** If your data is not TAB delimited, use *Text Manipulation->Convert* |
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| 28 | |
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| 29 | ----- |
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| 30 | |
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| 31 | **What it does** |
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| 32 | |
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| 33 | You can enter any value and it will be added as a new column to your Query |
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| 34 | |
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| 35 | ----- |
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| 36 | |
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| 37 | **Example** |
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| 38 | |
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| 39 | If you original data looks like this:: |
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| 40 | |
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| 41 | chr1 10 100 geneA |
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| 42 | chr2 200 300 geneB |
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| 43 | chr2 400 500 geneC |
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| 44 | |
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| 45 | Typing **+** in the text box will generate:: |
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| 46 | |
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| 47 | chr1 10 100 geneA + |
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| 48 | chr2 200 300 geneB + |
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| 49 | chr2 400 500 geneC + |
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| 50 | |
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| 51 | |
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| 52 | You can also add line numbers by selecting **Iterate: YES**. In this case if you enter **1** in the text box you will get:: |
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| 53 | |
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| 54 | chr1 10 100 geneA 1 |
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| 55 | chr2 200 300 geneB 2 |
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| 56 | chr2 400 500 geneC 3 |
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| 57 | |
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| 58 | |
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| 59 | |
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| 60 | </help> |
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| 61 | </tool> |
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