tools for functional profiling of gene lists linkToGProfile.pl $input $numerical_column $type $out_file1 Entrez Gene Acc OMIM Morbid Map OMIM Gene ID AFFY_HUGENE_1_0_ST_V1 HGNC_AUTOMATIC_GENE_ACC HGNC_MB001_ACC HGNC_ACC WIKIGENE_ACC DBASS5_ACC ILLUMINA_HUMANWG_6_V1 AFFY_HUEX_1_0_ST_V2 DBASS3_ACC

**Dataset formats** The input dataset is tabular_ with a column of identifiers. The output dataset is html_ with a link to g:Profiler. (`Dataset missing?`_) .. _tabular: ./static/formatHelp.html#tab .. _html: ./static/formatHelp.html#html .. _Dataset missing?: ./static/formatHelp.html ----- **What it does** This tool creates a link to the g:GOSt tool (Gene Group Functional Profiling), which is part of the g:Profiler site at the University of Tartu in Estonia. g:GOSt retrieves the most significant Gene Ontology (GO) terms, KEGG and REACTOME pathways, and TRANSFAC motifs for a user-specified group of genes, proteins, or microarray probes. g:GOSt also allows analysis of ranked or ordered lists of genes, visual browsing of GO graph structure, interactive visualization of retrieved results, and many other features. Multiple testing corrections are applied to extract only statistically important results. The g:GOSt form is pre-filled with gene, protein, or microarray probe IDs from the selected column of a tabular Galaxy dataset. To follow the created link, click on the eye icon when the Galaxy tool has finished running. Once at the g:Profiler site, scroll down to see the g:GOSt results. You can also adjust the options in the g:GOSt form to your liking, or use the row of links between the form and the results to run other g:Profiler tools using the same list of IDs. ----- **Reference** Reimand J, Kull M, Peterson H, Hansen J, Vilo J. (2007) g:Profiler -- a web-based toolset for functional profiling of gene lists from large-scale experiments. Nucleic Acids Res. 35(Web Server issue):W193-200. Epub 2007 May 3.