# for GTOOL linkage ped to marchini snptest format from galaxy import datatypes def exec_before_job(app, inp_data, out_data, param_dict, tool=None): """Sets the name of the data""" job_name = param_dict.get( 'o', 'Marchini' ) log = ['txt','%s_rgGTOOL_report.log' % job_name,'txt'] lookup={} lookup['logf'] = log for name in lookup.keys(): data = out_data[name] data_type,newname,ext = lookup[name] data = app.datatypes_registry.change_datatype(data, data_type) data.name = newname out_data[name] = data