for SOLiD data qualsolid_boxplot_graph.sh -t '$input.name' -i $input -o $output **What it does** Creates a boxplot graph for the quality scores in the library. .. class:: infomark **TIP:** Use the **Quality Statistics for SOLiD data** tool to generate the report file needed for this tool. ----- **Output Example** * Black horizontal lines are medians * Rectangular red boxes show the Inter-quartile Range (IQR) (top value is Q3, bottom value is Q1) * Whiskers show outliers at max. 1.5*IQR .. image:: ../static/images/solid_qual.png ------ This tool is based on `FASTX-toolkit`__ by Assaf Gordon. .. __: http://hannonlab.cshl.edu/fastx_toolkit/