#This is a sample file distributed with Galaxy that enables tools
#to use a directory of FileBinnedArray data files.  You will need
#to create these data files and then create a binned_scores.loc file 
#similar to this one (store it in this directory ) that points to 
#the directories in which those files are stored.  The binned_scores.loc 
#file has this format (white space characters are TAB characters):
#
#<build>	<description>	<dir>
#
#So, for example, if you had hg16 ENCODE binCons on MLAGAN alignments
#stored in /depot/data2/galaxy/binned_scores/hg16/encode_bincons_lagan, 
#then the binned_scores.loc entry would look like this:
#
#hg16    ENCODE binCons on MLAGAN alignments     /depot/data2/galaxy/binned_scores/hg16/encode_bincons_lagan
#
#and your /depot/data2/galaxy/binned_scores/hg16/encode_bincons_lagan
#directory would contain all of your "binned" files (e.g.):
#
#-rw-r--r--  1 james    universe 830134 2005-09-13 10:12 ENm001
#-rw-r--r--  1 james    universe 527388 2005-09-13 10:12 ENm002
#-rw-r--r--  1 james    universe 269808 2005-09-13 10:12 ENm003
#...etc...
#
#Your binned_scores.loc file should include an entry per line for each
#"binned" file you have stored.  For example:
#
#hg16	ENCODE binCons on MLAGAN alignments	/depot/data2/galaxy/binned_scores/hg16/encode_bincons_lagan
#hg16	ENCODE binCons on TBA alignments	/depot/data2/galaxy/binned_scores/hg16/encode_bincons_tba
#hg16	ENCODE GERP on MLAGAN alignment	/depot/data2/galaxy/binned_scores/hg16/encode_gerp_lagan
#hg16	ENCODE GERP on TBA alignment	/depot/data2/galaxy/binned_scores/hg16/encode_gerp_tba
#hg16	ENCODE phastCons on MLAGAN alignment	/depot/data2/galaxy/binned_scores/hg16/encode_phastcons_lagan
#hg16	ENCODE phastCons on TBA alignment	/depot/data2/galaxy/binned_scores/hg16/encode_phatcons_tba
#hg17	ENCODE phastCons on TBA alignment	/depot/data2/galaxy/binned_scores/hg17/phastcons_encode_sep2005_tba
#hg17	phastCons on 8-species multiz, 16-Jun-2005	/depot/data2/galaxy/binned_scores/hg17/phastcons_mzPt1Mm5Rn3Cf1Gg2Fr1Dr1/
#hg17	phastCons on 17-species multiz, 13-Apr-2006	/depot/data2/galaxy/binned_scores/hg17/phastCons17way/ba
#hg17	ESPERR Regulatory Potential, 7-species, 23-Jun-2006	/depot/data2/galaxy/binned_scores/hg17/esperr_rp_7way/ba
#hg18	phastCons on 17-species multiz, 06-Apr-2006	/depot/data2/galaxy/binned_scores/hg18/phastCons17way/ba