id	summary	reporter	owner	description	type	status	priority	milestone	component	version	resolution	keywords	cc	include_gantt	dependencies	due_assign	due_close
370	[エラー] ワークフローまわりでエラーが発生している	mn	t-hatakeyama	"http://galaxy.dbcls.jp でのエラー発生を報告します。

== （１）公開されたワークフローの一部を表示するとエラーになる。 ==

公開ワークフロー http://galaxy.dbcls.jp/workflow/list_published の thata さんの http://galaxy.dbcls.jp/u/thata/w/thatas-galaxy-workflow は表示されるけど、atsuko さんの http://galaxy.dbcls.jp/u/atsuko/w/snpsexonchr22 ではエラーになる。
{{{
Error Traceback:
View as:   Interactive  |  Text  |  XML (full)
⇝ KeyError: u'Grouping1'
URL: http://galaxy.dbcls.jp/u/atsuko/w/snpsexonchr22
Module weberror.evalexception.middleware:364 in respond          view
>>  app_iter = self.application(environ, detect_start_response)
Module paste.debug.prints:98 in __call__          view
>>  environ, self.app)
Module paste.wsgilib:539 in intercept_output          view
>>  app_iter = application(environ, replacement_start_response)
Module paste.recursive:80 in __call__          view
>>  return self.application(environ, start_response)
Module galaxy.web.framework.middleware.remoteuser:107 in __call__          view
>>  return self.app( environ, start_response )
Module paste.httpexceptions:632 in __call__          view
>>  return self.application(environ, start_response)
Module galaxy.web.framework.base:145 in __call__          view
>>  body = method( trans, **kwargs )
Module galaxy.web.controllers.workflow:205 in display_by_username_and_slug          view
>>  self.get_stored_workflow_steps( trans, stored_workflow )
Module galaxy.web.base.controller:213 in get_stored_workflow_steps          view
>>  module = module_factory.from_workflow_step( trans, step )
Module galaxy.workflow.modules:333 in from_workflow_step          view
>>  return self.module_types[type].from_workflow_step( trans, step )
Module galaxy.workflow.modules:192 in from_workflow_step          view
>>  module = Class( trans, tool_id )
Module galaxy.workflow.modules:166 in __init__          view
>>  self.tool = trans.app.toolbox.tools_by_id[ tool_id ]
KeyError: u'Grouping1'
}}}




== （２）ユーザ自身のワークフローを編集するとエラーが表示される。 ==

http://galaxy.dbcls.jp/workflow/editor?id=75cfda0e4b8063b8
{{{
Server error
URL: http://galaxy.dbcls.jp/workflow/load_workflow?_=1297826075869&id=75cfda0e4b8063b8&_=true
Module weberror.evalexception.middleware:364 in respond
>>  app_iter = self.application(environ, detect_start_response)
Module paste.debug.prints:98 in __call__
>>  environ, self.app)
Module paste.wsgilib:539 in intercept_output
>>  app_iter = application(environ, replacement_start_response)
Module paste.recursive:80 in __call__
>>  return self.application(environ, start_response)
Module galaxy.web.framework.middleware.remoteuser:107 in __call__
>>  return self.app( environ, start_response )
Module paste.httpexceptions:632 in __call__
>>  return self.application(environ, start_response)
Module galaxy.web.framework.base:145 in __call__
>>  body = method( trans, **kwargs )
Module galaxy.web.framework:65 in decorator
>>  return simplejson.dumps( func( self, trans, *args, **kwargs ) )
Module galaxy.web.controllers.workflow:756 in load_workflow
>>  module = module_factory.from_workflow_step( trans, step )
Module galaxy.workflow.modules:333 in from_workflow_step
>>  return self.module_types[type].from_workflow_step( trans, step )
Module galaxy.workflow.modules:192 in from_workflow_step
>>  module = Class( trans, tool_id )
Module galaxy.workflow.modules:166 in __init__
>>  self.tool = trans.app.toolbox.tools_by_id[ tool_id ]
KeyError: u'Cut1'
[]
}}}

"	不具合	closed	現マイルストーンで作業の停滞を招く	Problems	Galaxy		fixed		t-hatakeyama fujiwara mn atsuko	0		YYYY/MM/DD	YYYY/MM/DD