バージョン 17 から バージョン 21 における更新: チケット #47

差分発生行の前後
無視リスト:
更新日時:
2008/01/29 10:27:53 (17 年 前)
更新者:
h-morita
コメント:
  • bio_med_central とあるのを、biomed_central としてください。
  • high_wire_press とあるのを、highwire_press としてください。

上記変更に対応いたしました。ご確認ください。

凡例:

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  • チケット #47

    • ステータス 属性が new から reopened に 変更されました。
  • チケット #47 – 説明

    v17 v21  
    7777     * altavista: altavista による参照リンク検索 URL 
    7878    * papers: 参照文献検索 URI リスト 
    79      * bio_med_central: BioMed Central による参照文献検索 URL 
     79     * biomed_central: BioMed Central による参照文献検索 URL 
    8080     * scirus: scirus による参照文献検索 URL 
    81      * high_wire_press: high wire press による参照文献検索 URL 
     81     * highwire_press: high wire press による参照文献検索 URL 
    8282     * google_scholar: google scholar による参照文献検索 URL 
    8383    * pmid_list: 参照 PubMed の PMID リスト 
     
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    155155            <snippet xsi:type="xsd:string">...reaction (PCR)-based methods, candidate genes are usually screened in their entirety, exon by exon. &lt;strong&gt;Genomic&lt;/strong&gt; resources (i.e. www.ncbi.nih.gov, www.ensembl.org, and &lt;strong&gt;genome&lt;/strong&gt;.ucsc.edu) largely support this paradigm for mutation screening by making it easy to view...by making it easy to view and access sequence data associated with genes in their &lt;strong&gt;genomic&lt;/strong&gt; context. However, the administrative burden of conducting mutation screening in potentially hundreds of genes and...</snippet> 
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    207207            <snippet xsi:type="xsd:string">Finding anchors for &lt;strong&gt;genomic&lt;/strong&gt; sequence comparison. Recent sequencing of the human and other mammalian &lt;strong&gt;genomes&lt;/strong&gt; has brought about the necessity to align them, to identify and characterize their commonalities and...Algorithms Amino Acid Motifs Chromosome Mapping Sequence Analysis, DNA User-Computer Interface Databases, Genetic Mice &lt;strong&gt;Genome&lt;/strong&gt; Information Storage and Retrieval Internet Rats Computational Biology Software Models, Genetic Animals Oligonucleotide Array Sequence Analysis Databases, Genetic &lt;strong&gt;Genome&lt;/strong&gt; Gene Expression Profiling Sequence Alignment Software Chromosome Mapping Oligonucleotide Array Sequence Analysis User-Computer Interface Sequence Analysis, ... Nucleic Acid Hybridization Microarray Analysis Genetic Techniques Information Storage and Retrieval Sequence Analysis Chemistry, Analytical...</snippet> 
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    259259            <snippet xsi:type="xsd:string">...reaction (PCR)-based methods, candidate genes are usually screened in their entirety, exon by exon. &lt;strong&gt;Genomic&lt;/strong&gt; resources (i.e. www.ncbi.nih.gov, www.ensembl.org, and &lt;strong&gt;genome&lt;/strong&gt;.ucsc.edu) largely support this paradigm for mutation screening by making it easy to view...by making it easy to view and access sequence data associated with genes in their &lt;strong&gt;genomic&lt;/strong&gt; context. However, the administrative burden of conducting mutation screening in potentially hundreds of genes and...</snippet> 
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    361     <last_index_date>Thu Jan 17 19:37:26 +0900 2008</last_index_date> 
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    366366      <title>UCSC Genome Browser Home</title> 
    367367      <snippet> 
    368         Comparative <strong>Genomic</strong> Analysis Using the UCSC <strong>Genome</strong> Browser. Comparative analysis of DNA sequence from multiple species can provide insights into the function...sequence from multiple species can provide insights into the function and evolutionary processes that shape <strong>genomes</strong>. The University of California Santa Cruz (UCSC) <strong>Genome</strong> Bioinformatics group has developed several tools and methodologies in its study of comparative genomics, many... 
     368        ...reaction (PCR)-based methods, candidate genes are usually screened in their entirety, exon by exon. <strong>Genomic</strong> resources (i.e. www.ncbi.nih.gov, www.ensembl.org, and <strong>genome</strong>.ucsc.edu) largely support this paradigm for mutation screening by making it easy to view...by making it easy to view and access sequence data associated with genes in their <strong>genomic</strong> context. However, the administrative burden of conducting mutation screening in potentially hundreds of genes and... 
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    443446      <title>UCSC Genome Browser Home</title> 
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    445         Finding anchors for <strong>genomic</strong> sequence comparison . Recent sequencing of the human and other mammalian <strong>genomes</strong> has brought about the necessity to align them , to identify and characterize their commonalities and...Algorithms Amino Acid Motifs Chromosome Mapping Sequence Analysis, DNA User-Computer Interface Databases, Genetic Mice <strong>Genome</strong> Information Storage and Retrieval Internet Rats Computational Biology Software Models, Genetic Animals Oligonucleotide Array Sequence Analysis Databases, Genetic <strong>Genome</strong> Gene Expression Profiling Sequence Alignment Software Chromosome Mapping Oligonucleotide Array Sequence Analysis User-Computer Interface Sequence Analysis, ... Nucleic Acid Hybridization Microarray Analysis Genetic Techniques Information Storage and Retrieval Sequence Analysis Chemistry, Analytical... 
     448        Finding anchors for <strong>genomic</strong> sequence comparison. Recent sequencing of the human and other mammalian <strong>genomes</strong> has brought about the necessity to align them, to identify and characterize their commonalities and...Algorithms Amino Acid Motifs Chromosome Mapping Sequence Analysis, DNA User-Computer Interface Databases, Genetic Mice <strong>Genome</strong> Information Storage and Retrieval Internet Rats Computational Biology Software Models, Genetic Animals Oligonucleotide Array Sequence Analysis Databases, Genetic <strong>Genome</strong> Gene Expression Profiling Sequence Alignment Software Chromosome Mapping Oligonucleotide Array Sequence Analysis User-Computer Interface Sequence Analysis, ... Nucleic Acid Hybridization Microarray Analysis Genetic Techniques Information Storage and Retrieval Sequence Analysis Chemistry, Analytical... 
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    477480        <google_scholar> 
    478481          http://scholar.google.com/scholar?hl=en&amp;lr=&amp;q=www.genome.ucsc.edu%2F&amp;btnG=Search 
     
    480483      </papers> 
    481484      <pmid_list> 
     485        <pmid>16108715</pmid> 
    482486        <pmid>14681485</pmid> 
    483         <pmid>16108715</pmid> 
    484487      </pmid_list> 
    485488    </result> 
    486489    <result> 
    487490      <rank>3</rank> 
    488       <title>UCSC Genome Browser Home</title> 
     491      <title>Ensembl Genome Browser</title> 
    489492      <snippet> 
    490         IsoFinder : computational prediction of isochores in <strong>genome</strong> sequences . Isochores are long <strong>genome</strong> segments homogeneous in G+C . Here , we describe an algorithm ( IsoFinder ) running on the web...by each cut . This leads to the decomposition of a chromosome sequence into long homogeneous <strong>genome</strong> regions ( LHGRs ) with well-defined mean G+C contents , each significantly different from the G... 
     493        ...reaction (PCR)-based methods, candidate genes are usually screened in their entirety, exon by exon. <strong>Genomic</strong> resources (i.e. www.ncbi.nih.gov, www.ensembl.org, and <strong>genome</strong>.ucsc.edu) largely support this paradigm for mutation screening by making it easy to view...by making it easy to view and access sequence data associated with genes in their <strong>genomic</strong> context. However, the administrative burden of conducting mutation screening in potentially hundreds of genes and... 
    491494      </snippet> 
    492495      <mesh_term_list> 
     496        <mesh_term>ADP-Ribosylation Factors</mesh_term> 
     497        <mesh_term>Abnormalities, Multiple</mesh_term> 
     498        <mesh_term>Alternative Splicing</mesh_term> 
     499        <mesh_term>Automation</mesh_term> 
     500        <mesh_term>Carbamoyl-Phosphate Synthase I Deficiency Disease</mesh_term> 
     501        <mesh_term>Cardiomyopathy, Dilated</mesh_term> 
     502        <mesh_term>Chickens</mesh_term> 
     503        <mesh_term>Chromosome Deletion</mesh_term> 
     504        <mesh_term>Chromosome Mapping</mesh_term> 
     505        <mesh_term>Chromosomes, Human, Pair 2</mesh_term> 
    493506        <mesh_term>Computational Biology</mesh_term> 
     507        <mesh_term>DNA Primers</mesh_term> 
     508        <mesh_term>Database Management Systems</mesh_term> 
     509        <mesh_term>Databases, Factual</mesh_term> 
     510        <mesh_term>Databases, Genetic</mesh_term> 
     511        <mesh_term>Databases, Nucleic Acid</mesh_term> 
     512        <mesh_term>Dog Diseases</mesh_term> 
     513        <mesh_term>Exons</mesh_term> 
     514        <mesh_term>Expressed Sequence Tags</mesh_term> 
     515        <mesh_term>GTP Phosphohydrolases</mesh_term> 
     516        <mesh_term>Genes</mesh_term> 
     517        <mesh_term>Genetic Techniques</mesh_term> 
     518        <mesh_term>Genome</mesh_term> 
     519        <mesh_term>Genome, Human</mesh_term> 
    494520        <mesh_term>Genomics</mesh_term> 
    495         <mesh_term>Isochores</mesh_term> 
     521        <mesh_term>Glycosyltransferases</mesh_term> 
     522        <mesh_term>Information Dissemination</mesh_term> 
     523        <mesh_term>Information Storage and Retrieval</mesh_term> 
     524        <mesh_term>Internet</mesh_term> 
     525        <mesh_term>Membrane Proteins</mesh_term> 
     526        <mesh_term>Microsatellite Repeats</mesh_term> 
     527        <mesh_term>Models, Biological</mesh_term> 
     528        <mesh_term>Nucleic Acid Hybridization</mesh_term> 
     529        <mesh_term>Oligonucleotide Array Sequence Analysis</mesh_term> 
     530        <mesh_term>Polymorphism, Single Nucleotide</mesh_term> 
     531        <mesh_term>Promoter Regions (Genetics)</mesh_term> 
     532        <mesh_term>Quantitative Trait Loci</mesh_term> 
     533        <mesh_term>Regulatory Sequences, Nucleic Acid</mesh_term> 
     534        <mesh_term>Sarcoglycans</mesh_term> 
    496535        <mesh_term>Software</mesh_term> 
     536        <mesh_term>Systems Biology</mesh_term> 
     537        <mesh_term>Zebrafish</mesh_term> 
     538        <mesh_term>Zebrafish Proteins</mesh_term> 
    497539      </mesh_term_list> 
    498       <url>http://genome.cse.ucsc.edu/</url> 
     540      <url>http://www.ensembl.org/index.html</url> 
    499541      <pages> 
    500542        <google> 
    501           http://www.google.com/search?hl=en&amp;q=link%3ahttp%3A%2F%2Fgenome.cse.ucsc.edu%2F&amp;btnG=Google+Search 
     543          http://www.google.com/search?hl=en&amp;q=link%3ahttp%3A%2F%2Fwww.ensembl.org%2Findex.html&amp;btnG=Google+Search 
    502544        </google> 
    503545        <altavista> 
    504           http://www.altavista.com/web/results?itag=ody&amp;q=link:http%3A%2F%2Fgenome.cse.ucsc.edu%2F&amp;kgs=0&amp;kls=1 
     546          http://www.altavista.com/web/results?itag=ody&amp;q=link:http%3A%2F%2Fwww.ensembl.org%2Findex.html&amp;kgs=0&amp;kls=1 
    505547        </altavista> 
    506548      </pages> 
    507549      <papers> 
    508         <bio_med_central> 
    509           http://www.biomedcentral.com/search/results.asp?txtSearch1=genome.cse.ucsc.edu%2F&amp;chkBMCJournals=true&amp;chkCurrentOpinion=true&amp;drpFromDate=&amp;drpToDate=&amp;chkNSP=true&amp;drpAddedInLast=&amp;drpOrderBy=by+date&amp;drpPerPage=20&amp;drpAbstract=no+abstract&amp;strTempString=&amp;strSearchBoxType=bmc_boolean_results&amp;Search.x=10&amp;jou_id=&amp;Search.x=0&amp;Search.y=0&amp;Search=Search 
    510         </bio_med_central> 
     550        <biomed_central> 
     551          http://www.biomedcentral.com/search/results.asp?txtSearch1=www.ensembl.org%2Findex.html&amp;chkBMCJournals=true&amp;chkCurrentOpinion=true&amp;drpFromDate=&amp;drpToDate=&amp;chkNSP=true&amp;drpAddedInLast=&amp;drpOrderBy=by+date&amp;drpPerPage=20&amp;drpAbstract=no+abstract&amp;strTempString=&amp;strSearchBoxType=bmc_boolean_results&amp;Search.x=10&amp;jou_id=&amp;Search.x=0&amp;Search.y=0&amp;Search=Search 
     552        </biomed_central> 
    511553        <scirus> 
    512           http://www.scirus.com/srsapp/search?q=genome.cse.ucsc.edu%2F&amp;ds=jnl&amp;g=s&amp;t=all 
     554          http://www.scirus.com/srsapp/search?q=www.ensembl.org%2Findex.html&amp;ds=jnl&amp;g=s&amp;t=all 
    513555        </scirus> 
    514         <high_wire_press> 
    515           http://highwire.org/cgi/searchresults?fulltext=genome.cse.ucsc.edu%2F&amp;andorexactfulltext=and&amp;author1=&amp;pubdate_year=&amp;volume=&amp;firstpage=&amp;src=hw&amp;searchsubmit=redo&amp;resourcetype=1&amp;search=Search&amp;fmonth=Jan&amp;fyear=1844&amp;tmonth=Dec&amp;tyear=2007&amp;fdatedef=1+January+1844&amp;tdatedef=31+Dec+2007 
    516         </high_wire_press> 
     556        <highwire_press> 
     557          http://highwire.org/cgi/searchresults?fulltext=www.ensembl.org%2Findex.html&amp;andorexactfulltext=and&amp;author1=&amp;pubdate_year=&amp;volume=&amp;firstpage=&amp;src=hw&amp;searchsubmit=redo&amp;resourcetype=1&amp;search=Search&amp;fmonth=Jan&amp;fyear=1844&amp;tmonth=Dec&amp;tyear=2007&amp;fdatedef=1+January+1844&amp;tdatedef=31+Dec+2007 
     558        </highwire_press> 
    517559        <google_scholar> 
    518           http://scholar.google.com/scholar?hl=en&amp;lr=&amp;q=genome.cse.ucsc.edu%2F&amp;btnG=Search 
     560          http://scholar.google.com/scholar?hl=en&amp;lr=&amp;q=www.ensembl.org%2Findex.html&amp;btnG=Search 
    519561        </google_scholar> 
    520562      </papers> 
    521563      <pmid_list> 
    522         <pmid>15215396</pmid> 
     564        <pmid>18000006</pmid> 
     565        <pmid>18172923</pmid> 
     566        <pmid>17537812</pmid> 
     567        <pmid>17148474</pmid> 
     568        <pmid>16729214</pmid> 
     569        <pmid>16381931</pmid> 
     570        <pmid>16888346</pmid> 
     571        <pmid>15608235</pmid> 
     572        <pmid>16103655</pmid> 
     573        <pmid>16610137</pmid> 
     574        <pmid>15216554</pmid> 
     575        <pmid>15189572</pmid> 
     576        <pmid>15123591</pmid> 
     577        <pmid>15123595</pmid> 
     578        <pmid>15123590</pmid> 
     579        <pmid>15078858</pmid> 
     580        <pmid>14681459</pmid> 
     581        <pmid>12519943</pmid> 
     582        <pmid>11890680</pmid> 
     583        <pmid>11752248</pmid> 
     584        <pmid>12385995</pmid> 
    523585      </pmid_list> 
    524586    </result>