バージョン 26 から バージョン 27 における更新: チケット #47

差分発生行の前後
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更新日時:
2008/02/26 16:22:09 (17 年 前)
更新者:
h-morita
コメント:
  • 検索結果に ID を追加
  • オンラインリソース更新日を追加
  • pages / papers を動的に増やせるように schema を変更

凡例:

変更なし
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  • チケット #47 – 説明

    v26 v27  
    6767  * results: 検索結果リスト 
    6868   * item: 検索結果単体 ( REST の場合は result ) 
     69    * id: オンラインリソース ID 
    6970    * rank: 検索一致ランク 
    7071    * title: オンラインリソースタイトル 
     72    * updated_at: データ更新日 ( XML Schema 形式の日付で記載 ) 
    7173    * average_stars: レーティング平均値 
    7274    * snippet: スニペット 
    … …  
    7577    * url: オンラインリソース URL 
    7678    * pages: 参照リンク検索 URL リスト 
    77      * google: google による参照リンク検索 URL 
    78      * altavista: altavista による参照リンク検索 URL 
     79     * item: 参照リンク検索 ( REST の場合は page ) 
     80      * name: 検索エンジン名 
     81      * url: 参照リンク検索 URL 
    7982    * papers: 参照文献検索 URI リスト 
    80      * biomed_central: !BioMed Central による参照文献検索 URL 
    81      * scirus: scirus による参照文献検索 URL 
    82      * highwire_press: high wire press による参照文献検索 URL 
    83      * google_scholar: google scholar による参照文献検索 URL 
     83     * item: 参照文献検索 ( REST の場合は paper ) 
     84      * name: 検索エンジン名 
     85      * url: 参照文献検索 URL 
    8486    * pmid_list: 参照 !PubMed の PMID リスト 
    8587     * item: 参照 !PubMed の pmid ( REST の場合は pmid ) 
    … …  
    129131 
    130132    </SOAP-ENV:Envelope> 
    131  
    132133  }}} 
    133134 * レスポンス 
    … …  
    154155            xsi:type="n2:Array"> 
    155156          <item> 
    156             <snippet xsi:type="xsd:string">Comparative &lt;strong&gt;Genomic&lt;/strong&gt; Analysis Using the UCSC &lt;strong&gt;Genome&lt;/strong&gt; Browser. Comparative analysis of DNA sequence from multiple species can provide insights into the function...sequence from multiple species can provide insights into the function and evolutionary processes that shape &lt;strong&gt;genomes&lt;/strong&gt;. The University of California Santa Cruz (UCSC) &lt;strong&gt;Genome&lt;/strong&gt; Bioinformatics group has developed several tools and methodologies in its study of comparative genomics, many...</snippet> 
    157             <papers xsi:type="n1:Retrieve..Papers"> 
    158               <highwire_press xsi:type="xsd:string">http://highwire.org/cgi/searchresults?fulltext=genome.ucsc.edu%2F&amp;amp;andorexactfulltext=and&amp;amp;author1=&amp;amp;pubdate_year=&amp;amp;volume=&amp;amp;firstpage=&amp;amp;src=hw&amp;amp;searchsubmit=redo&amp;amp;resourcetype=1&amp;amp;search=Search&amp;amp;fmonth=Jan&amp;amp;fyear=1844&amp;amp;tmonth=Dec&amp;amp;tyear=2007&amp;amp;fdatedef=1+January+1844&amp;amp;tdatedef=31+Dec+2007</highwire_press> 
    159               <scirus xsi:type="xsd:string">http://www.scirus.com/srsapp/search?q=genome.ucsc.edu%2F&amp;amp;ds=jnl&amp;amp;g=s&amp;amp;t=all</scirus> 
    160               <biomed_central xsi:type="xsd:string">http://www.biomedcentral.com/search/results.asp?txtSearch1=genome.ucsc.edu%2F&amp;amp;chkBMCJournals=true&amp;amp;chkCurrentOpinion=true&amp;amp;drpFromDate=&amp;amp;drpToDate=&amp;amp;chkNSP=true&amp;amp;drpAddedInLast=&amp;amp;drpOrderBy=by+date&amp;amp;drpPerPage=20&amp;amp;drpAbstract=no+abstract&amp;amp;strTempString=&amp;amp;strSearchBoxType=bmc_boolean_results&amp;amp;Search.x=10&amp;amp;jou_id=&amp;amp;Search.x=0&amp;amp;Search.y=0&amp;amp;Search=Search</biomed_central> 
    161               <google_scholar xsi:type="xsd:string">http://scholar.google.com/scholar?hl=en&amp;amp;lr=&amp;amp;q=genome.ucsc.edu%2F&amp;amp;btnG=Search</google_scholar> 
    162             </papers> 
    163             <average_stars xsi:type="xsd:double">+4</average_stars> 
    164             <pages xsi:type="n1:Retrieve..Pages"> 
    165               <google xsi:type="xsd:string">http://www.google.com/search?hl=en&amp;amp;q=link%3ahttp%3A%2F%2Fgenome.ucsc.edu%2F&amp;amp;btnG=Google+Search</google> 
    166               <altavista xsi:type="xsd:string">http://www.altavista.com/web/results?itag=ody&amp;amp;q=link:http%3A%2F%2Fgenome.ucsc.edu%2F&amp;amp;kgs=0&amp;amp;kls=1</altavista> 
    167             </pages> 
    168             <title xsi:type="xsd:string">UCSC Genome Browser Home</title> 
    169             <rank xsi:type="xsd:int">1</rank> 
    170             <url xsi:type="xsd:string">http://genome.ucsc.edu/</url> 
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    171158            <mesh_term_list n2:arrayType="xsd:string[28]" 
    172159                xsi:type="n2:Array"> 
    … …  
    218205              <item>16888346</item> 
    219206            </pmid_list> 
     207            <snippet xsi:type="xsd:string">Comparative &lt;strong&gt;Genomic&lt;/strong&gt; Analysis Using the UCSC &lt;strong&gt;Genome&lt;/strong&gt; Browser. Comparative analysis of DNA sequence from multiple species can provide insights into the function...sequence from multiple species can provide insights into the function and evolutionary processes that shape &lt;strong&gt;genomes&lt;/strong&gt;. The University of California Santa Cruz (UCSC) &lt;strong&gt;Genome&lt;/strong&gt; Bioinformatics group has developed several tools and methodologies in its study of comparative genomics, many...</snippet> 
     208            <rank xsi:type="xsd:int">1</rank> 
     209            <papers n2:arrayType="n1:Retrieve..Paper[4]" 
     210                xsi:type="n2:Array"> 
     211              <item> 
     212                <name xsi:type="xsd:string">BioMed Central</name> 
     213                <url xsi:type="xsd:string">http://www.biomedcentral.com/search/results.asp?txtSearch1=genome.ucsc.edu%2F&amp;amp;chkBMCJournals=true&amp;amp;chkCurrentOpinion=true&amp;amp;drpFromDate=&amp;amp;drpToDate=&amp;amp;chkNSP=true&amp;amp;drpAddedInLast=&amp;amp;drpOrderBy=by+date&amp;amp;drpPerPage=20&amp;amp;drpAbstract=no+abstract&amp;amp;strTempString=&amp;amp;strSearchBoxType=bmc_boolean_results&amp;amp;Search.x=10&amp;amp;jou_id=&amp;amp;Search.x=0&amp;amp;Search.y=0&amp;amp;Search=Search</url> 
     214              </item> 
     215              <item> 
     216                <name xsi:type="xsd:string">Scirus</name> 
     217                <url xsi:type="xsd:string">http://www.scirus.com/srsapp/search?q=genome.ucsc.edu%2F&amp;amp;ds=jnl&amp;amp;g=s&amp;amp;t=all</url> 
     218              </item> 
     219              <item> 
     220                <name xsi:type="xsd:string">HighWire Press</name> 
     221                <url xsi:type="xsd:string">http://highwire.org/cgi/searchresults?fulltext=genome.ucsc.edu%2F&amp;amp;andorexactfulltext=and&amp;amp;author1=&amp;amp;pubdate_year=&amp;amp;volume=&amp;amp;firstpage=&amp;amp;src=hw&amp;amp;searchsubmit=redo&amp;amp;resourcetype=1&amp;amp;search=Search&amp;amp;fmonth=Jan&amp;amp;fyear=1844&amp;amp;tmonth=Dec&amp;amp;tyear=2007&amp;amp;fdatedef=1+January+1844&amp;amp;tdatedef=31+Dec+2007</url> 
     222              </item> 
     223              <item> 
     224                <name xsi:type="xsd:string">Google Scholar</name> 
     225                <url xsi:type="xsd:string">http://scholar.google.com/scholar?hl=en&amp;amp;lr=&amp;amp;q=genome.ucsc.edu%2F&amp;amp;btnG=Search</url> 
     226              </item> 
     227            </papers> 
     228            <average_stars xsi:type="xsd:double">+3.5</average_stars> 
     229            <url xsi:type="xsd:string">http://genome.ucsc.edu/</url> 
     230            <updated_at xsi:type="xsd:dateTime">2008-02-20T00:00:00+09:00</updated_at> 
     231            <pages n2:arrayType="n1:Retrieve..Page[2]" 
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     233              <item> 
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     235                <url xsi:type="xsd:string">http://www.google.com/search?hl=en&amp;amp;q=link%3ahttp%3A%2F%2Fgenome.ucsc.edu%2F&amp;amp;btnG=Google+Search</url> 
     236              </item> 
     237              <item> 
     238                <name xsi:type="xsd:string">Altavista</name> 
     239                <url xsi:type="xsd:string">http://www.altavista.com/web/results?itag=ody&amp;amp;q=link:http%3A%2F%2Fgenome.ucsc.edu%2F&amp;amp;kgs=0&amp;amp;kls=1</url> 
     240              </item> 
     241            </pages> 
     242            <title xsi:type="xsd:string">UCSC Genome Browser Home</title> 
    220243          </item> 
    221244          <item> 
    222             <snippet xsi:type="xsd:string">Finding anchors for &lt;strong&gt;genomic&lt;/strong&gt; sequence comparison . Recent sequencing of the human and other mammalian &lt;strong&gt;genomes&lt;/strong&gt; has brought about the necessity to align them , to identify and characterize their commonalities and...Algorithms Amino Acid Motifs Chromosome Mapping Sequence Analysis, DNA User-Computer Interface Databases, Genetic Mice &lt;strong&gt;Genome&lt;/strong&gt; Information Storage and Retrieval Internet Rats Computational Biology Software Models, Genetic Animals Oligonucleotide Array Sequence Analysis Databases, Genetic &lt;strong&gt;Genome&lt;/strong&gt; Gene Expression Profiling Sequence Alignment Software Chromosome Mapping Oligonucleotide Array Sequence Analysis User-Computer Interface Sequence Analysis, ... Nucleic Acid Hybridization Microarray Analysis Genetic Techniques Information Storage and Retrieval Sequence Analysis Chemistry, Analytical...</snippet> 
    223             <papers xsi:type="n1:Retrieve..Papers"> 
    224               <highwire_press xsi:type="xsd:string">http://highwire.org/cgi/searchresults?fulltext=www.genome.ucsc.edu%2F&amp;amp;andorexactfulltext=and&amp;amp;author1=&amp;amp;pubdate_year=&amp;amp;volume=&amp;amp;firstpage=&amp;amp;src=hw&amp;amp;searchsubmit=redo&amp;amp;resourcetype=1&amp;amp;search=Search&amp;amp;fmonth=Jan&amp;amp;fyear=1844&amp;amp;tmonth=Dec&amp;amp;tyear=2007&amp;amp;fdatedef=1+January+1844&amp;amp;tdatedef=31+Dec+2007</highwire_press> 
    225               <scirus xsi:type="xsd:string">http://www.scirus.com/srsapp/search?q=www.genome.ucsc.edu%2F&amp;amp;ds=jnl&amp;amp;g=s&amp;amp;t=all</scirus> 
    226               <biomed_central xsi:type="xsd:string">http://www.biomedcentral.com/search/results.asp?txtSearch1=www.genome.ucsc.edu%2F&amp;amp;chkBMCJournals=true&amp;amp;chkCurrentOpinion=true&amp;amp;drpFromDate=&amp;amp;drpToDate=&amp;amp;chkNSP=true&amp;amp;drpAddedInLast=&amp;amp;drpOrderBy=by+date&amp;amp;drpPerPage=20&amp;amp;drpAbstract=no+abstract&amp;amp;strTempString=&amp;amp;strSearchBoxType=bmc_boolean_results&amp;amp;Search.x=10&amp;amp;jou_id=&amp;amp;Search.x=0&amp;amp;Search.y=0&amp;amp;Search=Search</biomed_central> 
    227               <google_scholar xsi:type="xsd:string">http://scholar.google.com/scholar?hl=en&amp;amp;lr=&amp;amp;q=www.genome.ucsc.edu%2F&amp;amp;btnG=Search</google_scholar> 
    228             </papers> 
    229             <average_stars xsi:type="xsd:double">+0</average_stars> 
    230             <pages xsi:type="n1:Retrieve..Pages"> 
    231               <google xsi:type="xsd:string">http://www.google.com/search?hl=en&amp;amp;q=link%3ahttp%3A%2F%2Fwww.genome.ucsc.edu%2F&amp;amp;btnG=Google+Search</google> 
    232               <altavista xsi:type="xsd:string">http://www.altavista.com/web/results?itag=ody&amp;amp;q=link:http%3A%2F%2Fwww.genome.ucsc.edu%2F&amp;amp;kgs=0&amp;amp;kls=1</altavista> 
    233             </pages> 
    234             <title xsi:type="xsd:string">UCSC Genome Browser Home</title> 
    235             <rank xsi:type="xsd:int">2</rank> 
    236             <url xsi:type="xsd:string">http://www.genome.ucsc.edu/</url> 
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    … …  
    252261              <item>16108715</item> 
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     263            <snippet xsi:type="xsd:string">Finding anchors for &lt;strong&gt;genomic&lt;/strong&gt; sequence comparison . Recent sequencing of the human and other mammalian &lt;strong&gt;genomes&lt;/strong&gt; has brought about the necessity to align them , to identify and characterize their commonalities and...Algorithms Amino Acid Motifs Chromosome Mapping Sequence Analysis, DNA User-Computer Interface Databases, Genetic Mice &lt;strong&gt;Genome&lt;/strong&gt; Information Storage and Retrieval Internet Rats Computational Biology Software Models, Genetic Animals Oligonucleotide Array Sequence Analysis Databases, Genetic &lt;strong&gt;Genome&lt;/strong&gt; Gene Expression Profiling Sequence Alignment Software Chromosome Mapping Oligonucleotide Array Sequence Analysis User-Computer Interface Sequence Analysis, ... Nucleic Acid Hybridization Microarray Analysis Genetic Techniques Information Storage and Retrieval Sequence Analysis Chemistry, Analytical...</snippet> 
     264            <rank xsi:type="xsd:int">2</rank> 
     265            <papers n2:arrayType="n1:Retrieve..Paper[4]" 
     266                xsi:type="n2:Array"> 
     267              <item> 
     268                <name xsi:type="xsd:string">BioMed Central</name> 
     269                <url xsi:type="xsd:string">http://www.biomedcentral.com/search/results.asp?txtSearch1=www.genome.ucsc.edu%2F&amp;amp;chkBMCJournals=true&amp;amp;chkCurrentOpinion=true&amp;amp;drpFromDate=&amp;amp;drpToDate=&amp;amp;chkNSP=true&amp;amp;drpAddedInLast=&amp;amp;drpOrderBy=by+date&amp;amp;drpPerPage=20&amp;amp;drpAbstract=no+abstract&amp;amp;strTempString=&amp;amp;strSearchBoxType=bmc_boolean_results&amp;amp;Search.x=10&amp;amp;jou_id=&amp;amp;Search.x=0&amp;amp;Search.y=0&amp;amp;Search=Search</url> 
     270              </item> 
     271              <item> 
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     274              </item> 
     275              <item> 
     276                <name xsi:type="xsd:string">HighWire Press</name> 
     277                <url xsi:type="xsd:string">http://highwire.org/cgi/searchresults?fulltext=www.genome.ucsc.edu%2F&amp;amp;andorexactfulltext=and&amp;amp;author1=&amp;amp;pubdate_year=&amp;amp;volume=&amp;amp;firstpage=&amp;amp;src=hw&amp;amp;searchsubmit=redo&amp;amp;resourcetype=1&amp;amp;search=Search&amp;amp;fmonth=Jan&amp;amp;fyear=1844&amp;amp;tmonth=Dec&amp;amp;tyear=2007&amp;amp;fdatedef=1+January+1844&amp;amp;tdatedef=31+Dec+2007</url> 
     278              </item> 
     279              <item> 
     280                <name xsi:type="xsd:string">Google Scholar</name> 
     281                <url xsi:type="xsd:string">http://scholar.google.com/scholar?hl=en&amp;amp;lr=&amp;amp;q=www.genome.ucsc.edu%2F&amp;amp;btnG=Search</url> 
     282              </item> 
     283            </papers> 
     284            <average_stars xsi:type="xsd:double">+0</average_stars> 
     285            <url xsi:type="xsd:string">http://www.genome.ucsc.edu/</url> 
     286            <updated_at xsi:type="xsd:dateTime">2008-02-18T00:00:00+09:00</updated_at> 
     287            <pages n2:arrayType="n1:Retrieve..Page[2]" 
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     292              </item> 
     293              <item> 
     294                <name xsi:type="xsd:string">Altavista</name> 
     295                <url xsi:type="xsd:string">http://www.altavista.com/web/results?itag=ody&amp;amp;q=link:http%3A%2F%2Fwww.genome.ucsc.edu%2F&amp;amp;kgs=0&amp;amp;kls=1</url> 
     296              </item> 
     297            </pages> 
     298            <title xsi:type="xsd:string">UCSC Genome Browser Home</title> 
    254299          </item> 
    255300          <item> 
    256             <snippet xsi:type="xsd:string">IsoFinder : computational prediction of isochores in &lt;strong&gt;genome&lt;/strong&gt; sequences . Isochores are long &lt;strong&gt;genome&lt;/strong&gt; segments homogeneous in G+C . Here , we describe an algorithm ( IsoFinder ) running on the web...by each cut . This leads to the decomposition of a chromosome sequence into long homogeneous &lt;strong&gt;genome&lt;/strong&gt; regions ( LHGRs ) with well-defined mean G+C contents , each significantly different from the G...</snippet> 
    257             <papers xsi:type="n1:Retrieve..Papers"> 
    258               <highwire_press xsi:type="xsd:string">http://highwire.org/cgi/searchresults?fulltext=genome.cse.ucsc.edu%2F&amp;amp;andorexactfulltext=and&amp;amp;author1=&amp;amp;pubdate_year=&amp;amp;volume=&amp;amp;firstpage=&amp;amp;src=hw&amp;amp;searchsubmit=redo&amp;amp;resourcetype=1&amp;amp;search=Search&amp;amp;fmonth=Jan&amp;amp;fyear=1844&amp;amp;tmonth=Dec&amp;amp;tyear=2007&amp;amp;fdatedef=1+January+1844&amp;amp;tdatedef=31+Dec+2007</highwire_press> 
    259               <scirus xsi:type="xsd:string">http://www.scirus.com/srsapp/search?q=genome.cse.ucsc.edu%2F&amp;amp;ds=jnl&amp;amp;g=s&amp;amp;t=all</scirus> 
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    261               <google_scholar xsi:type="xsd:string">http://scholar.google.com/scholar?hl=en&amp;amp;lr=&amp;amp;q=genome.cse.ucsc.edu%2F&amp;amp;btnG=Search</google_scholar> 
    262             </papers> 
    263             <average_stars xsi:type="xsd:double">+0</average_stars> 
    264             <pages xsi:type="n1:Retrieve..Pages"> 
    265               <google xsi:type="xsd:string">http://www.google.com/search?hl=en&amp;amp;q=link%3ahttp%3A%2F%2Fgenome.cse.ucsc.edu%2F&amp;amp;btnG=Google+Search</google> 
    266               <altavista xsi:type="xsd:string">http://www.altavista.com/web/results?itag=ody&amp;amp;q=link:http%3A%2F%2Fgenome.cse.ucsc.edu%2F&amp;amp;kgs=0&amp;amp;kls=1</altavista> 
    267             </pages> 
    268             <title xsi:type="xsd:string">UCSC Genome Browser Home</title> 
    269             <rank xsi:type="xsd:int">3</rank> 
    270             <url xsi:type="xsd:string">http://genome.cse.ucsc.edu/</url> 
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    271302            <mesh_term_list n2:arrayType="xsd:string[4]" 
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    … …  
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    319388        Comparative <strong>Genomic</strong> Analysis Using the UCSC <strong>Genome</strong> Browser. Comparative analysis of DNA sequence from multiple species can provide insights into the function...sequence from multiple species can provide insights into the function and evolutionary processes that shape <strong>genomes</strong>. The University of California Santa Cruz (UCSC) <strong>Genome</strong> Bioinformatics group has developed several tools and methodologies in its study of comparative genomics, many... 
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    397486        Finding anchors for <strong>genomic</strong> sequence comparison . Recent sequencing of the human and other mammalian <strong>genomes</strong> has brought about the necessity to align them , to identify and characterize their commonalities and...Algorithms Amino Acid Motifs Chromosome Mapping Sequence Analysis, DNA User-Computer Interface Databases, Genetic Mice <strong>Genome</strong> Information Storage and Retrieval Internet Rats Computational Biology Software Models, Genetic Animals Oligonucleotide Array Sequence Analysis Databases, Genetic <strong>Genome</strong> Gene Expression Profiling Sequence Alignment Software Chromosome Mapping Oligonucleotide Array Sequence Analysis User-Computer Interface Sequence Analysis, ... Nucleic Acid Hybridization Microarray Analysis Genetic Techniques Information Storage and Retrieval Sequence Analysis Chemistry, Analytical... 
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    443552        IsoFinder : computational prediction of isochores in <strong>genome</strong> sequences . Isochores are long <strong>genome</strong> segments homogeneous in G+C . Here , we describe an algorithm ( IsoFinder ) running on the web...by each cut . This leads to the decomposition of a chromosome sequence into long homogeneous <strong>genome</strong> regions ( LHGRs ) with well-defined mean G+C contents , each significantly different from the G... 
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