Index: /BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/QueryPathGenerator.java
===================================================================
--- /BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/QueryPathGenerator.java (revision 111)
+++ /BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/QueryPathGenerator.java (revision 118)
@@ -26,8 +26,35 @@
         String sc = "http://purl.org/allie/ontology/201108#ShortForm";
         String ec = "http://purl.org/allie/ontology/201108#LongForm";
-        QueryPathGenerator qpg = new QueryPathGenerator(sp, "c:\\cdata");
-        SClass[] cl = qpg.getClasses(null);
-        Path[] path = qpg.getPaths(sc, ec, false);
-        System.out.println(path.length);
+        //String sp = "http://www.ebi.ac.uk/rdf/services/chembl/sparql";
+        //String sc = "http://rdf.ebi.ac.uk/terms/chembl#Enzyme";
+        //String ec = "http://rdf.ebi.ac.uk/terms/chembl#Activity";
+        //String sp = "http://www.ebi.ac.uk/rdf/services/biosamples/sparql";
+        //String sc = "http://rdf.ebi.ac.uk/terms/biosd/Sample";
+        //String ec = "http://purl.obolibrary.org/obo/NCBITaxon_7955";
+        //String sp = "http://www.ebi.ac.uk/rdf/services/biosamples/sparql";
+        //String sc = "http://rdf.ebi.ac.uk/terms/biosd/Sample";
+        //String ec = "http://purl.obolibrary.org/obo/NCBITaxon_7955";
+        //String sp = "http://lsd.dbcls.jp/sparql";
+        //String sc = "http://purl.jp/bio/10/lsd/ontology/201209#EnglishCode";
+        //String ec = "http://purl.jp/bio/10/lsd/ontology/201209#JapaneseCode";
+        //QueryPathGenerator qpg = new QueryPathGenerator(sp, "c:\\cdata");
+        QueryPathGenerator qpg1 = new QueryPathGenerator(sp, "cdata/");
+        //SClass[] cl = qpg.getClasses(null);
+        
+        long start1 = System.currentTimeMillis();
+        Path[] path1 = qpg1.getPaths(sc, ec, false);
+        long end1 = System.currentTimeMillis();
+        
+        QueryPathGenerator qpg2 = new QueryPathGenerator(sp, "ddata/");
+        long start2 = System.currentTimeMillis();
+        Path[] path2 = qpg2.getPaths(sc, ec, false);
+        long end2 = System.currentTimeMillis();
+        System.out.println("TOTAL1:");
+        System.out.println(end1 - start1);
+        System.out.println("TOTAL2:");
+        System.out.println(end2 - start2);
+        
+        System.out.println(path1.length);
+        System.out.println(path2.length);
     }