Index: BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/AcquiredStructureAnalyzer.java
===================================================================
--- BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/AcquiredStructureAnalyzer.java (revision 128)
+++ BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/AcquiredStructureAnalyzer.java (revision 150)
@@ -35,20 +35,23 @@
 	
 	public static void main(String[] args) throws Exception{
-		JenaModelGenerator jmGene = new JenaModelGenerator("c:\\temp\\reactomeF18s.ttl");
+
+		JenaModelGenerator jmGene = new JenaModelGenerator("c:\\temp\\biosamplesF11.ttl");
+//		JenaModelGenerator jmGene = new JenaModelGenerator("c:\\temp\\reactomeF18s.ttl");
 		AcquiredStructureAnalyzer impl 
 			= new AcquiredStructureAnalyzer(jmGene.getEndpointURI(), jmGene.getGraphURIs(), jmGene.getModel());
-//		System.out.println("--------------------------");
-//		SClass[] scs = impl.getOWLClasses(null, null, null, true);
-//		System.out.println("list classes:---------------");
-//		for(SClass sc: scs){
-//			System.out.println(sc.toString());
+
+		System.out.println("--------------------------");
+		SClass[] scs = impl.getOWLClasses(null, null, null, true);
+		System.out.println("list classes:---------------");
+		for(SClass sc: scs){
+			System.out.println(sc.toString());
+		}
+		System.out.println("--------------------------");
+		
+//		ClassLink[] cls = impl.getNextClass(null,"http://www.biopax.org/release/biopax-level3.owl#Protein",100,true );
+//		for(ClassLink cl: cls){
+//			System.out.println(cl.toString());
 //		}
 //		System.out.println("--------------------------");
-		
-		ClassLink[] cls = impl.getNextClass(null,"http://www.biopax.org/release/biopax-level3.owl#Protein",100,true );
-		for(ClassLink cl: cls){
-			System.out.println(cl.toString());
-		}
-		System.out.println("--------------------------");
 		
 	}