Index: /BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/OWLQueryBuilderImpl.java
===================================================================
--- /BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/OWLQueryBuilderImpl.java (revision 61)
+++ /BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/OWLQueryBuilderImpl.java (revision 65)
@@ -708,5 +708,6 @@
 			boolean countLinks) throws Exception {
 		OWLClassGraph graph = new OWLClassGraph(startClass, endClass);
-		return graph.getPaths(this, mode, countLinks);
+                // mode = 2 & countLinks = true are recommended
+                return graph.getPaths(this, mode, countLinks);
 	}