Index: BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/AcquiredStructureAnalyzer.java
===================================================================
--- BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/AcquiredStructureAnalyzer.java (revision 94)
+++ BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/AcquiredStructureAnalyzer.java (revision 95)
@@ -216,5 +216,4 @@
 		queryStr.append(" ?pp <http://sparqlbuilder.org/numberOfInstancesOfRangeClass> ?numInsRan \n");
 	
-
 		queryStr.append("}\n");
 		
Index: BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/EndpointAnalyzer.java
===================================================================
--- BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/EndpointAnalyzer.java (revision 80)
+++ BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/EndpointAnalyzer.java (revision 95)
@@ -584,5 +584,5 @@
 				}
 				ClassLink cl = new ClassLink(proURI, clsURI, direction,
-						numOfLinks, 0, 0, 0, 0);
+						numOfLinks, 0, 0, 0, 0, true, true);
 				solCLs.add(cl);
 			}
@@ -698,5 +698,5 @@
 			ClassLink cl = new ClassLink(propURI, clsURI, direction,
 					numOfLinks, numOfOriginInstances, numOfLinkedInstances, 0,
-					0);
+					0, true, true);
 			solCLs.add(cl);
 		}