Index: BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/AcquiredStructureAnalyzer.java
===================================================================
--- BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/AcquiredStructureAnalyzer.java (revision 95)
+++ BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/AcquiredStructureAnalyzer.java (revision 99)
@@ -34,5 +34,5 @@
 	
 	public static void main(String[] args) throws Exception{
-		JenaModelGenerator jmGene = new JenaModelGenerator("c:\\temp\\dberdf.ttl");
+		JenaModelGenerator jmGene = new JenaModelGenerator("c:\\temp\\dberdf.xml");
 		AcquiredStructureAnalyzer impl 
 			= new AcquiredStructureAnalyzer(jmGene.getEndpointURI(), jmGene.getGraphURIs(), jmGene.getModel());
@@ -45,5 +45,5 @@
 		System.out.println("--------------------------");
 		
-		ClassLink[] cls = impl.getNextClass(null,"http://purl.org/allie/ontology/201108#EachPair",100,true );
+		ClassLink[] cls = impl.getNextClass(null,"http://purl.org/allie/ontology/201108#ShortForm",100,true );
 		for(ClassLink cl: cls){
 			System.out.println(cl.toString());
Index: BH13SPARQLBuilder/.settings/org.eclipse.core.resources.prefs
===================================================================
--- BH13SPARQLBuilder/.settings/org.eclipse.core.resources.prefs (revision 85)
+++ BH13SPARQLBuilder/.settings/org.eclipse.core.resources.prefs (revision 99)
@@ -2,2 +2,3 @@
 encoding//src/org/biohackathon/SPARQLBuilder/OWL/EndpointAnalyzer.java=UTF-8
 encoding/<project>=UTF-8
+encoding/src=UTF-8