# # ChangeLog for / # # Generated by Trac 0.11.5.ja1 # 2024/11/11 09:10:51 Fri, 04 Jul 2014 10:37:28 GMT nori [103] * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/AcquiredStructureAnalyzer.java (変更) * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/QueryPathGenerator.java (変更) * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/StructureCrawler.java (変更) Fri, 04 Jul 2014 09:59:01 GMT lenz [102] * BH13SPARQLBuilder/src/hozo/maptool/jsgui.html (変更) メニューの位置等の変更 大量のパスが送られた際に備えツリー型に変更 オンマウスでパス情報の表示等細かなブラッシュアップ Fri, 04 Jul 2014 09:58:55 GMT atsuko [101] * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/QueryPathGenerator.java (変更) テスト用コードをコメントアウト Fri, 04 Jul 2014 09:56:22 GMT atsuko [100] * BH13SPARQLBuilder (変更) * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/QueryPathGenerator.java (変更) * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/RDFSchemaAnalyzerFactory.java (変更) querypathgenerator improved Thu, 03 Jul 2014 12:09:18 GMT nori [99] * BH13SPARQLBuilder/.settings/org.eclipse.core.resources.prefs (変更) * BH13SPARQLBuilder/src/jp (削除) * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/AcquiredStructureAnalyzer.java (変更) delete riken crawler files Thu, 03 Jul 2014 10:19:06 GMT nori [98] * BH13SPARQLBuilder/src/jp/riken/accc/db/rdf/crawler/dataStructure/sparql/RDFsCrawlerImpl.java (変更) UTF-8文字コードがおかしなファイル？？？が修正できたかテスト Thu, 03 Jul 2014 09:42:29 GMT atsuko [97] * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/OWLClassGraph.java (変更) ClassLink コンストラクタ変更に追従 Thu, 03 Jul 2014 09:27:44 GMT nori [96] * BH13SPARQLBuilder/src/jp (追加) * BH13SPARQLBuilder/src/jp/riken (追加) * BH13SPARQLBuilder/src/jp/riken/accc (追加) * BH13SPARQLBuilder/src/jp/riken/accc/db (追加) * BH13SPARQLBuilder/src/jp/riken/accc/db/rdf (追加) * BH13SPARQLBuilder/src/jp/riken/accc/db/rdf/crawler (追加) * BH13SPARQLBuilder/src/jp/riken/accc/db/rdf/crawler/dataStructure (追加) * BH13SPARQLBuilder/src/jp/riken/accc/db/rdf/crawler/dataStructure/SchemaCategory.java (追加) * BH13SPARQLBuilder/src/jp/riken/accc/db/rdf/crawler/dataStructure/sparql (追加) * BH13SPARQLBuilder/src/jp/riken/accc/db/rdf/crawler/dataStructure/sparql/JenaModelGenerator.java (追加) * BH13SPARQLBuilder/src/jp/riken/accc/db/rdf/crawler/dataStructure/sparql/RDFsCrawler.java (追加) * BH13SPARQLBuilder/src/jp/riken/accc/db/rdf/crawler/dataStructure/sparql/RDFsCrawlerImpl.java (追加) 理研で作ったクローラーを追加 Thu, 03 Jul 2014 08:22:41 GMT nori [95] * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/AcquiredStructureAnalyzer.java (変更) * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/EndpointAnalyzer.java (変更) 暫定的な対応：あとでクエリの見直し要 Thu, 03 Jul 2014 05:59:43 GMT nori [94] * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/AcquiredStructureAnalyzer.java (変更) * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/ClassLink.java (変更) * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/Label.java (変更) 新しいクローラデータに対応した構造アナライザー Wed, 02 Jul 2014 14:50:41 GMT nori [93] * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/AcquiredStructureAnalyzer.java (変更) * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/RDFSchemaAnalyzerFactory.java (変更) * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/StructureCrawler.java (変更) クローラ出力ファイルを指定する機能を追加 Wed, 02 Jul 2014 02:09:28 GMT lenz [92] * BH13SPARQLBuilder/src/hozo/maptool/jsgui.html (追加) javascript版GUIのコミット 35～53行目部分のURLをサーブレットに変更することで動く想定、要確認 Tue, 01 Jul 2014 09:38:07 GMT atsuko [91] * BH13SPARQLBuilder/src/hozo/sparql/gui/SparqlBuilderPanel.java (変更) sparqlbuilderpanel is changed for new classes Tue, 01 Jul 2014 05:19:29 GMT atsuko [90] * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/OWLClassGraph.java (変更) * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/QueryPathGenerator.java (変更) * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/RDFSchemaAnalyzerFactory.java (変更) Latest version of OWLClassGraph.java Thu, 19 Jun 2014 08:57:53 GMT nori [89] * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/StructureCrawler.java (変更) 別endpointでrange-domainの関係がnullで返ってくる不具合を解消 Thu, 19 Jun 2014 06:44:36 GMT nori [88] * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/AcquiredStructureAnalyzer.java (変更) * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/StructureCrawler.java (変更) クローラー結果から、StartClass, EndClassにそれぞれ含まれるインスタンス数を取得できるようにした Thu, 19 Jun 2014 02:37:09 GMT atsuko [87] * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/RDFSchemaAnalyzerFactory.java (変更) Constructor for RDFSchemaAnalyzerFactory is added Wed, 18 Jun 2014 09:44:35 GMT nori [86] * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/RDFSchemaAnalyzerFactory.java (変更) * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/StructureCrawler.java (変更) クロール済みのEndpointURIListをとってこれるように追加 Wed, 18 Jun 2014 09:04:20 GMT nori [85] * BH13SPARQLBuilder/.classpath (変更) * BH13SPARQLBuilder/.settings/org.eclipse.core.resources.prefs (変更) * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/RDFSchemaAnalyzerFactory.java (変更) * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/StructureCrawler.java (追加) StructureCrawlerクラス導入 Wed, 18 Jun 2014 08:23:13 GMT atsuko [84] * BH13SPARQLBuilder/src/hozo/sparql/gui/SparqlBuilderPanel.java (変更) Changed for new Java Classes Wed, 18 Jun 2014 08:17:59 GMT atsuko [83] * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/QueryPathGenerator.java (追加) Changed for new Java Classes Wed, 18 Jun 2014 08:15:06 GMT atsuko [82] * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/OWLClassGraph.java (変更) Changed for new Java Classes Wed, 18 Jun 2014 06:19:51 GMT nori [81] * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/RDFSchemaAnalyzerFactory.java (変更) bugfix: data->file Wed, 18 Jun 2014 06:15:37 GMT nori [80] * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/AcquiredStructureAnalyzer.java (追加) * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/EndpointAnalyzer.java (移動) * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/RDFSchemaAnalyzer.java (移動) * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/RDFSchemaAnalyzerFactory.java (追加) リファクタリング Tue, 27 May 2014 06:10:24 GMT atsuko [79] * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/OWLClassSearcherImpl.java (変更) とりあえず手元でエラーを吐かないようにしました Tue, 22 Apr 2014 07:14:16 GMT wu [78] * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/SimpleTree.java (追加) a simple class used to find the minimum superparents Tue, 22 Apr 2014 01:01:57 GMT kozaki [77] * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/Path.java (変更) JSON調整 Tue, 22 Apr 2014 00:58:00 GMT kozaki [76] * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/ClassLink.java (変更) JSON出力の調整 Tue, 22 Apr 2014 00:57:15 GMT kozaki [75] * BH13SPARQLBuilder/src/hozo/maptool/MapFactory.java (変更) JSON出力の調整 Tue, 22 Apr 2014 00:56:44 GMT kozaki [74] * BH13SPARQLBuilder/src/hozo/sparql/gui/SparqlBuilderPanel.java (変更) 微調整 Mon, 21 Apr 2014 09:26:32 GMT nori [73] * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/Path.java (変更) 見栄え良くしただけ Mon, 21 Apr 2014 09:21:18 GMT nori [72] * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/OWLClassSearcher.java (追加) * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/OWLClassSearcherImpl.java (追加) * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/Path.java (変更) Path Mon, 21 Apr 2014 09:16:30 GMT kozaki [71] * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/ClassLink.java (変更) JSON出力部の調整 Mon, 21 Apr 2014 09:11:15 GMT kozaki [70] * BH13SPARQLBuilder/src/hozo/sparql/gui/SparqlBuilderPanel.java (変更) JSON出力 Mon, 21 Apr 2014 09:01:54 GMT kozaki [69] * BH13SPARQLBuilder/src/hozo/maptool/MapFactory.java (変更) パスの生成時に，パス情報をJSONで出力（標準出力へ） Mon, 21 Apr 2014 09:00:35 GMT kozaki [68] * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/Path.java (変更) JSON出力が上手くいかないので，独自メソッドを導入． Mon, 21 Apr 2014 08:43:03 GMT atsuko [67] * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/OWLClassGraph.java (変更) 様々な枝刈り手法を入れたSearchPathsWithCutを実装(getPaths の mode=2 で起動) Mon, 21 Apr 2014 08:36:32 GMT nori [66] * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/Path.java (変更) Pathでarrayを使ってJSONオブジェクトを作るようにした。 Mon, 21 Apr 2014 07:45:21 GMT atsuko [65] * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/OWLQueryBuilderImpl.java (変更) getPaths に推奨パラメタについてコメント入れました Mon, 21 Apr 2014 06:46:44 GMT atsuko [64] * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/ClassLink.java (変更) "}"数不一致を訂正 Mon, 21 Apr 2014 04:32:02 GMT nori [63] * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/ClassLink.java (変更) * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/Path.java (変更) add two methods toJSON and toJSONString for Classes Path and ClassLink Mon, 21 Apr 2014 04:15:02 GMT nori [62] * BH13SPARQLBuilder/pom.xml (変更) update pom.xml to use org.json Thu, 13 Mar 2014 09:14:43 GMT nori [61] * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/OWLQueryBuilderImpl.java (変更) Debug!! Thu, 13 Mar 2014 07:42:47 GMT wu [60] * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/OWLQueryBuilderImpl.java (変更) language　パラメータ実装しました Thu, 13 Mar 2014 07:02:20 GMT nori [59] * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/OWLQueryBuilder.java (変更) * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/OWLQueryBuilderImpl.java (変更) クラスのキーワード検索で、言語Languageを指定できるようにした Thu, 13 Mar 2014 06:37:26 GMT wu [58] * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/OWLQueryBuilderImpl.java (変更) keywords のOR　relationship 実装しました Thu, 13 Mar 2014 06:30:48 GMT nori [57] * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/OWLQueryBuilderImpl.java (変更) listClassesの些細なSPARQLクエリの修正 Thu, 13 Mar 2014 03:04:01 GMT nori [56] * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/OWLQueryBuilderImpl.java (変更) OWLQueryBuilderImpl.listClasses を実装した Thu, 13 Mar 2014 02:39:13 GMT nori [55] * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/OWLQueryBuilder.java (変更) * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/OWLQueryBuilderImpl.java (変更) クラス検索機能について、複数のキーワードが指定できるよう、引数をStringからString[]に変更 Tue, 18 Feb 2014 09:24:51 GMT nori [54] * BH13SPARQLBuilder/src/hozo/sparql/gui/SparqlBuilderPanel.java (変更) * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/ClassLink.java (変更) * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/OWLQueryBuilderImpl.java (変更) 軽微な書式変更 Tue, 18 Feb 2014 09:08:10 GMT atsuko [53] * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/OWLClassGraph.java (変更) instance 数0対応 Tue, 18 Feb 2014 08:20:23 GMT atsuko [52] * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/OWLClassGraph.java (変更) convergence & divergence 判定改良 Tue, 18 Feb 2014 07:06:40 GMT atsuko [51] * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/OWLClassGraph.java (変更) convergence & divergence 判定改良 Tue, 18 Feb 2014 07:04:38 GMT atsuko [50] * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/OWLClassGraph.java (変更) convergence & divergence 判定改良 Mon, 17 Feb 2014 10:05:46 GMT nori [49] * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/ClassLink.java (変更) * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/OWLQueryBuilderImpl.java (変更) ClassLinkに、リンク元クラス、リンク先クラスそれぞれのインスタンス数を保持できるように拡張。だが、このデータは使わないかも。 Mon, 17 Feb 2014 09:49:52 GMT atsuko [48] * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/OWLClassGraph.java (変更) convergence & divergence 判定改良 Mon, 17 Feb 2014 07:31:43 GMT atsuko [47] * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/OWLClassGraph.java (変更) convergence & divergence 判定追加 Mon, 17 Feb 2014 07:11:59 GMT nori [46] * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/ClassLink.java (変更) * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/OWLQueryBuilderImpl.java (変更) getNextClassで、トリプルの起点となるインスタンス数と終点となるインスタンス数をそれぞれ求められるようにした。 Mon, 17 Feb 2014 06:40:07 GMT atsuko [45] * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/OWLClassGraph.java (変更) searchPathsWithCut 追加 Fri, 31 Jan 2014 04:41:34 GMT kozaki [44] * BH13SPARQLBuilder/src/hozo/sparql/gui/SparqlBuilderPanel.java (変更) Demo用のGUI（Allieの例入り） Fri, 31 Jan 2014 04:40:41 GMT kozaki [43] * BH13SPARQLBuilder/settings.xml (変更) demo用のエンドポイントデータ（Tool用設定ファイル）です Fri, 31 Jan 2014 04:29:57 GMT nori [42] * BH13SPARQLBuilder/.classpath (変更) * BH13SPARQLBuilder/lib2 (追加) * BH13SPARQLBuilder/lib2/agraph-4.5.jar (追加) * BH13SPARQLBuilder/lib2/commons-codec-1.3.jar (追加) * BH13SPARQLBuilder/lib2/commons-httpclient-3.1-src.zip (追加) * BH13SPARQLBuilder/lib2/commons-httpclient-3.1.jar (追加) * BH13SPARQLBuilder/lib2/icu4j-3.4.4.jar (追加) * BH13SPARQLBuilder/lib2/jena-arq-2.9.0-incubating.jar (追加) * BH13SPARQLBuilder/lib2/jena-core-2.7.0-incubating.jar (追加) * BH13SPARQLBuilder/lib2/jena-iri-0.9.0-incubating.jar (追加) * BH13SPARQLBuilder/lib2/json.jar (追加) * BH13SPARQLBuilder/lib2/jsonic-1.2.8.jar (追加) * BH13SPARQLBuilder/lib2/log4j-1.2.16.jar (追加) * BH13SPARQLBuilder/lib2/openrdf-sesame-2.6.2-onejar.jar (追加) * BH13SPARQLBuilder/lib2/slf4j-api-1.6.4.jar (追加) * BH13SPARQLBuilder/lib2/xercesImpl-2.10.0.jar (追加) * BH13SPARQLBuilder/lib2/xercesImpl.jar (追加) * BH13SPARQLBuilder/lib2/xml-apis-1.4.01.jar (追加) * BH13SPARQLBuilder/lib2/xml-apis.jar (追加) * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/OWLQueryBuilderImpl.java (変更) wrap: getNextClass and countLinks Fri, 31 Jan 2014 04:26:43 GMT atsuko [41] * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/OWLClassGraph.java (変更) nstep 変更 Fri, 31 Jan 2014 03:26:11 GMT kozaki [40] * BH13SPARQLBuilder/src/hozo/maptool/MapFactory.java (変更) * BH13SPARQLBuilder/src/hozo/sparql/gui/SparqlBuilderPanel.java (変更) Fri, 31 Jan 2014 02:26:15 GMT atsuko [39] * BH13SPARQLBuilder/src/hozo/sparql/edit/AllegroEditor.java (変更) Fri, 31 Jan 2014 02:19:55 GMT kozaki [38] * BH13SPARQLBuilder/pom.xml (変更) ライブラリ設定を追加 Fri, 31 Jan 2014 02:19:30 GMT kozaki [37] * BH13SPARQLBuilder/src/hozo/maptool/MapFactory.java (変更) Fri, 31 Jan 2014 02:17:26 GMT nori [36] * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/OWLQueryBuilder.java (変更) * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/OWLQueryBuilderImpl.java (変更) SPARQLクエリの整形 Fri, 31 Jan 2014 01:56:38 GMT kozaki [35] * BH13SPARQLBuilder/src/hozo/sparql/gui/VersionDialog.java (変更) * BH13SPARQLBuilder/src/hozo/sparql/plugin/compare/Compare.java (変更) * BH13SPARQLBuilder/src/hozo/sparql/plugin/compare/CompareSubject.java (変更) * BH13SPARQLBuilder/src/hozo/sparql/util/Version.java (変更) Fri, 31 Jan 2014 01:35:01 GMT atsuko [34] * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/OWLClassGraph.java (変更) パス探索を numOfLinks <= th で枝刈り Fri, 31 Jan 2014 01:20:45 GMT kozaki [33] * BH13SPARQLBuilder/src/hozo/sparql/gui/SparqlBuilderPanel.java (変更) Fri, 31 Jan 2014 01:00:56 GMT atsuko [32] * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/OWLClassGraph.java (変更) * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/OWLQueryBuilder.java (変更) * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/OWLQueryBuilderImpl.java (変更) getPath の引数変更 Fri, 31 Jan 2014 00:59:11 GMT nori [31] * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/OWLQueryBuilder.java (変更) * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/OWLQueryBuilderImpl.java (変更) クラス取得後、あとからインスタンス数をとってこれるようにcountInstancesメソッドを追加 Fri, 31 Jan 2014 00:49:03 GMT atsuko [30] * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/OWLQueryBuilderImpl.java (変更) getPath の引数変更 Fri, 31 Jan 2014 00:46:45 GMT atsuko [29] * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/OWLClassGraph.java (変更) getPath の引数変更 Fri, 31 Jan 2014 00:38:51 GMT nori [28] * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/OWLQueryBuilder.java (変更) * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/OWLQueryBuilderImpl.java (変更) getOWLClassesで、ヒットしたクラスに属するインスタンスの数を数えるかどうかをフラグで制御できるようにした Thu, 30 Jan 2014 17:22:35 GMT nori [27] * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/OWLQueryBuilderImpl.java (変更) getNextClass のexists句を変えてSPARQLの処理速度が向上したはず Thu, 30 Jan 2014 16:03:12 GMT nori [26] * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/ClassLink.java (変更) * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/OWLQueryBuilder.java (変更) * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/OWLQueryBuilderImpl.java (変更) getNextClass で、インスタンス同士のトリプルが存在しないクラスは返り値から除くように変更。 Thu, 30 Jan 2014 07:53:33 GMT kozaki [25] * BH13SPARQLBuilder/src/hozo/maptool/MapFactory.java (変更) URIの省略表示（最後の/か#の左を使う）に対応 Thu, 30 Jan 2014 07:28:03 GMT kozaki [24] * BH13SPARQLBuilder/src/hozo/maptool/MapFactory.java (変更) * BH13SPARQLBuilder/src/hozo/sparql/gui/SparqlBuilderPanel.java (変更) 動作確認済みのGUI Class選択機能も追加 Thu, 30 Jan 2014 07:01:39 GMT nori [23] * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/OWLQueryBuilderImpl.java (変更) getNextClassのgetIntでヌルポが出る不具合を修正 Thu, 30 Jan 2014 06:43:23 GMT nori [22] * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/OWLQueryBuilderImpl.java (変更) SPARQLの答がないときにヌルポが出る不具合を修正 Thu, 30 Jan 2014 06:18:22 GMT atsuko [21] * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/OWLClassGraph.java (変更) getNextClass の引数変更に伴う変更 Thu, 30 Jan 2014 06:15:33 GMT nori [20] * BH13SPARQLBuilder/doc/lib2 (移動) * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/OWLQueryBuilder.java (変更) * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/OWLQueryBuilderImpl.java (変更) getNextClassでcountLinksパラメータを追加した Thu, 30 Jan 2014 06:00:30 GMT nori [19] * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/Label.java (変更) * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/LabelMap.java (追加) * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/OWLQueryBuilderImpl.java (変更) 試験のために、getNextClassesのSPARQLクエリを簡素なものに一時変更、 TODO：　オプション設定できるようにする Thu, 30 Jan 2014 05:02:49 GMT nori [18] * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/Instance.java (変更) * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/OWLQueryBuilderImpl.java (変更) Thu, 30 Jan 2014 04:53:23 GMT kozaki [17] * BH13SPARQLBuilder/src/hozo/maptool/MapFactory.java (変更) * BH13SPARQLBuilder/src/hozo/sparql/AllegroAccessor.java (変更) * BH13SPARQLBuilder/src/hozo/sparql/CoreVersion.java (変更) * BH13SPARQLBuilder/src/hozo/sparql/CrossSparqlAccessor.java (変更) * BH13SPARQLBuilder/src/hozo/sparql/EndpointSettings.java (変更) * BH13SPARQLBuilder/src/hozo/sparql/EndpointSettingsManager.java (変更) * BH13SPARQLBuilder/src/hozo/sparql/PlainSparqlAccessor.java (変更) * BH13SPARQLBuilder/src/hozo/sparql/SeparatedValuesExporter.java (変更) * BH13SPARQLBuilder/src/hozo/sparql/SparqlAccessor.java (変更) * BH13SPARQLBuilder/src/hozo/sparql/SparqlAccessorFactory.java (変更) * BH13SPARQLBuilder/src/hozo/sparql/SparqlQueryListener.java (変更) * BH13SPARQLBuilder/src/hozo/sparql/SparqlResultListener.java (変更) * BH13SPARQLBuilder/src/hozo/sparql/SparqlResultSet.java (変更) * BH13SPARQLBuilder/src/hozo/sparql/SparqlUtil.java (変更) * BH13SPARQLBuilder/src/hozo/sparql/ThreadedSparqlAccessor.java (変更) * BH13SPARQLBuilder/src/hozo/sparql/edit/AllegroEditor.java (変更) * BH13SPARQLBuilder/src/hozo/sparql/gui/CrossKeywordSearchPanel.java (変更) * BH13SPARQLBuilder/src/hozo/sparql/gui/EndpointSelector.java (変更) * BH13SPARQLBuilder/src/hozo/sparql/gui/GUIVersion.java (変更) * BH13SPARQLBuilder/src/hozo/sparql/gui/KeywordSearchPanel.java (変更) * BH13SPARQLBuilder/src/hozo/sparql/gui/OptionDialog.java (変更) * BH13SPARQLBuilder/src/hozo/sparql/gui/RepositoryKeywordSearchEditPanel.java (変更) * BH13SPARQLBuilder/src/hozo/sparql/gui/SparqlAccessorForm.java (変更) * BH13SPARQLBuilder/src/hozo/sparql/gui/SparqlBuilderPanel.java (変更) * BH13SPARQLBuilder/src/hozo/sparql/gui/SparqlSearchPanel.java (変更) * BH13SPARQLBuilder/src/hozo/sparql/gui/TripleEditDialog.java (変更) * BH13SPARQLBuilder/src/hozo/sparql/gui/VersionDialog.java (変更) * BH13SPARQLBuilder/src/hozo/sparql/plugin/compare/Compare.java (変更) * BH13SPARQLBuilder/src/hozo/sparql/plugin/compare/ComparePanel.java (変更) * BH13SPARQLBuilder/src/hozo/sparql/plugin/compare/CompareResultListener.java (変更) * BH13SPARQLBuilder/src/hozo/sparql/plugin/compare/CompareSubject.java (変更) * BH13SPARQLBuilder/src/hozo/sparql/plugin/compare/CompareSubjectPanel.java (変更) * BH13SPARQLBuilder/src/hozo/sparql/plugin/compare/FileUtil.java (変更) * BH13SPARQLBuilder/src/hozo/sparql/util/CheckableList.java (変更) * BH13SPARQLBuilder/src/hozo/sparql/util/CheckableListItem.java (変更) * BH13SPARQLBuilder/src/hozo/sparql/util/EditableList.java (変更) * BH13SPARQLBuilder/src/hozo/sparql/util/EditableListItem.java (変更) * BH13SPARQLBuilder/src/hozo/sparql/util/StringUtil.java (変更) * BH13SPARQLBuilder/src/hozo/sparql/util/Version.java (変更) Commitし直します． Thu, 30 Jan 2014 04:42:32 GMT atsuko [16] * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/OWLQueryBuilderImpl.java (変更) OWLClassGraph の getPaths の引数変更に伴う変更 Thu, 30 Jan 2014 04:41:37 GMT atsuko [15] * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/OWLClassGraph.java (変更) getPaths の引数変更 第二引数が0: クラス間探索, 1: インスタンス利用探索 Thu, 30 Jan 2014 04:24:00 GMT kozaki [14] * BH13SPARQLBuilder/lib2 (追加) * BH13SPARQLBuilder/lib2/agraph-4.5.jar (追加) * BH13SPARQLBuilder/lib2/commons-codec-1.3.jar (追加) * BH13SPARQLBuilder/lib2/commons-httpclient-3.1-src.zip (追加) * BH13SPARQLBuilder/lib2/commons-httpclient-3.1.jar (追加) * BH13SPARQLBuilder/lib2/icu4j-3.4.4.jar (追加) * BH13SPARQLBuilder/lib2/jena-arq-2.9.0-incubating.jar (追加) * BH13SPARQLBuilder/lib2/jena-core-2.7.0-incubating.jar (追加) * BH13SPARQLBuilder/lib2/jena-iri-0.9.0-incubating.jar (追加) * BH13SPARQLBuilder/lib2/json.jar (追加) * BH13SPARQLBuilder/lib2/jsonic-1.2.8.jar (追加) * BH13SPARQLBuilder/lib2/log4j-1.2.16.jar (追加) * BH13SPARQLBuilder/lib2/openrdf-sesame-2.6.2-onejar.jar (追加) * BH13SPARQLBuilder/lib2/slf4j-api-1.6.4.jar (追加) * BH13SPARQLBuilder/lib2/xercesImpl-2.10.0.jar (追加) * BH13SPARQLBuilder/lib2/xercesImpl.jar (追加) * BH13SPARQLBuilder/lib2/xml-apis-1.4.01.jar (追加) * BH13SPARQLBuilder/lib2/xml-apis.jar (追加) GUI用のライブラリです Thu, 30 Jan 2014 04:05:04 GMT kozaki [13] * BH13SPARQLBuilder/settings.xml (追加) GUIの設定保存用のファイルです． Thu, 30 Jan 2014 03:15:54 GMT atsuko [12] * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/LabeledMultiDigraph.java (変更) Nodes->Node Thu, 30 Jan 2014 02:49:52 GMT nori [11] * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/Path.java (変更) PathのJavaDOCコメントの文字化けを修正 Thu, 30 Jan 2014 02:47:45 GMT nori [10] * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/Label.java (変更) * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/OWLQueryBuilder.java (変更) * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/OWLQueryBuilderImpl.java (変更) * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/SClass.java (追加) getOWLClassesの返り値をSClassのリストに変更 Thu, 30 Jan 2014 02:20:28 GMT kozaki [9] * BH13SPARQLBuilder/src/hozo/sparql (追加) * BH13SPARQLBuilder/src/hozo/sparql/AllegroAccessor.java (追加) * BH13SPARQLBuilder/src/hozo/sparql/CoreVersion.java (追加) * BH13SPARQLBuilder/src/hozo/sparql/CrossSparqlAccessor.java (追加) * BH13SPARQLBuilder/src/hozo/sparql/EndpointSettings.java (追加) * BH13SPARQLBuilder/src/hozo/sparql/EndpointSettingsManager.java (追加) * BH13SPARQLBuilder/src/hozo/sparql/PlainSparqlAccessor.java (追加) * BH13SPARQLBuilder/src/hozo/sparql/SeparatedValuesExporter.java (追加) * BH13SPARQLBuilder/src/hozo/sparql/SparqlAccessor.java (追加) * BH13SPARQLBuilder/src/hozo/sparql/SparqlAccessorFactory.java (追加) * BH13SPARQLBuilder/src/hozo/sparql/SparqlQueryListener.java (追加) * BH13SPARQLBuilder/src/hozo/sparql/SparqlResultListener.java (追加) * BH13SPARQLBuilder/src/hozo/sparql/SparqlResultSet.java (追加) * BH13SPARQLBuilder/src/hozo/sparql/SparqlUtil.java (追加) * BH13SPARQLBuilder/src/hozo/sparql/ThreadedSparqlAccessor.java (追加) * BH13SPARQLBuilder/src/hozo/sparql/edit (追加) * BH13SPARQLBuilder/src/hozo/sparql/edit/AllegroEditor.java (追加) * BH13SPARQLBuilder/src/hozo/sparql/gui (追加) * BH13SPARQLBuilder/src/hozo/sparql/gui/CrossKeywordSearchPanel.java (追加) * BH13SPARQLBuilder/src/hozo/sparql/gui/EndpointSelector.java (追加) * BH13SPARQLBuilder/src/hozo/sparql/gui/GUIVersion.java (追加) * BH13SPARQLBuilder/src/hozo/sparql/gui/KeywordSearchPanel.java (追加) * BH13SPARQLBuilder/src/hozo/sparql/gui/OptionDialog.java (追加) * BH13SPARQLBuilder/src/hozo/sparql/gui/RepositoryKeywordSearchEditPanel.java (追加) * BH13SPARQLBuilder/src/hozo/sparql/gui/SparqlAccessorForm.java (追加) * BH13SPARQLBuilder/src/hozo/sparql/gui/SparqlBuilderPanel.java (追加) * BH13SPARQLBuilder/src/hozo/sparql/gui/SparqlSearchPanel.java (追加) * BH13SPARQLBuilder/src/hozo/sparql/gui/TripleEditDialog.java (追加) * BH13SPARQLBuilder/src/hozo/sparql/gui/VersionDialog.java (追加) * BH13SPARQLBuilder/src/hozo/sparql/plugin (追加) * BH13SPARQLBuilder/src/hozo/sparql/plugin/compare (追加) * BH13SPARQLBuilder/src/hozo/sparql/plugin/compare/Compare.java (追加) * BH13SPARQLBuilder/src/hozo/sparql/plugin/compare/ComparePanel.java (追加) * BH13SPARQLBuilder/src/hozo/sparql/plugin/compare/CompareResultListener.java (追加) * BH13SPARQLBuilder/src/hozo/sparql/plugin/compare/CompareSubject.java (追加) * BH13SPARQLBuilder/src/hozo/sparql/plugin/compare/CompareSubjectPanel.java (追加) * BH13SPARQLBuilder/src/hozo/sparql/plugin/compare/FileUtil.java (追加) * BH13SPARQLBuilder/src/hozo/sparql/util (追加) * BH13SPARQLBuilder/src/hozo/sparql/util/CheckableList.java (追加) * BH13SPARQLBuilder/src/hozo/sparql/util/CheckableListItem.java (追加) * BH13SPARQLBuilder/src/hozo/sparql/util/EditableList.java (追加) * BH13SPARQLBuilder/src/hozo/sparql/util/EditableListItem.java (追加) * BH13SPARQLBuilder/src/hozo/sparql/util/StringUtil.java (追加) * BH13SPARQLBuilder/src/hozo/sparql/util/Version.java (追加) * BH13SPARQLBuilder/src/hozo/sparql/util/blank.png (追加) * BH13SPARQLBuilder/src/hozo/sparql/util/x.png (追加) GUI部分です． Thu, 30 Jan 2014 01:59:12 GMT atsuko [8] * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/OWLClassGraph.java (変更) * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/Path.java (変更) getPaths in OWLClassGraph updated Thu, 30 Jan 2014 01:57:30 GMT kozaki [7] * BH13SPARQLBuilder/src/hozo (追加) * BH13SPARQLBuilder/src/hozo/maptool (追加) * BH13SPARQLBuilder/src/hozo/maptool/ExtendBP.java (追加) * BH13SPARQLBuilder/src/hozo/maptool/ExtendFrame.java (追加) * BH13SPARQLBuilder/src/hozo/maptool/MapFactory.java (追加) GUI部分です． Thu, 30 Jan 2014 01:51:34 GMT kozaki [6] * SparqlBuilderWithGUI (追加) Share project "SparqlBuilderWithGUI" into ... Thu, 30 Jan 2014 01:50:28 GMT nori [5] * BH13SPARQLBuilder/pom.xml (変更) * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/OWLQueryBuilderImpl.java (変更) introduce numOfLinks for method getNextClass Thu, 30 Jan 2014 01:44:02 GMT kozaki [4] * SparqlBuilder_withGUI (追加) GUI付きバージョンです．後日，整理し直します． Share project "SparqlBuilder_withGUI" into ... Thu, 30 Jan 2014 01:31:23 GMT atsuko [3] * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/OWLClassGraph.java (変更) * BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/Path.java (変更) The latest OWLClassGraph.java added