バージョン 2 から バージョン 3 における更新: 4store

差分発生行の前後
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更新日時:
2012/03/09 13:57:17 (13 年 前)
更新者:
wu
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  • 4store

    v2 v3  
    1515=== 4store 配置 === #Configure 
    1616 
     17 
     18{{{ 
     19$ cd $4STORE_HOME/bin 
     20$ ./4s-backend-setup allie 
     21$ ./4s-backend allie 
     22./4s-import -v allie --format ntriples datapath --model http://myURI.com 
     23}}} 
     24 
     25Configuration consideration (refer to [http://4store.org/]): 
     26  
     27Here specify the cluster and segmentation values:  
     284s-backend-setup --node 0 --cluster 1 --segments 4 demo 
     29 
     30The number of segments should be a power of 2, parallelisation depends on segmentation. As a rule of thumb try a power of 2 close to twice as many segments as there are physical CPUs or CPU cores on the system, but depending on the workload you may find less or more work better.  
     31 
    1732=== Load Performance === #load 
     33 
    1834 
    1935=== Allie upload === #allieload  
    2036  
     37Approach 1: Default setting (2 segments) 
     38 
     39           About 12 minutes 
     40 
     41Approach 2: 8 segments 
     42 
     43          About 13 minutes 
     44 
     45          Segment setting makes no too much difference. 
    2146 
    2247=== PDBJ upload === #pdbjload  
    23  
    24  
    25 '''Result:''' 
     48          Over 4 days 
    2649 
    2750=== Uniprot upload === #uniprotload