バージョン 19 から バージョン 20 における更新: OwlimSe

更新日時:

2012/08/24 11:07:10 (13 年 前)

更新者:

wu

コメント:

--

OwlimSe

@@ -96 +96 @@
 }}}
 
-and we use 12 threads to import, it took 68 hours and 29 minutes.       
+and we used 12 threads to import, it took 68 hours and 29 minutes.      
 
 when 
@@ -104 +104 @@
 }}}
 
-and we use 3 threads to import, it took 59 hours and 15 minutes.
+and we used 3 threads to import, it took 59 hours and 15 minutes.
 
 === DDBJ upload === #ddbjload  
 
+when
+{{{
+-Xmx60G -Xms30G -Druleset=empty -Dentity-index-size=675000000 -Dcache-memory=20633m  -DenablePredicateList=false -Dtuple-index-memory=20633m -DftsIndexPolicy=never  -Dbuild-pcsot=false -Dbuild-ptsoc=false  -Djournaling=true -Drepository-type=file-repository   -XX:+UseG1GC -XX:+HeapDumpOnOutOfMemoryError -Dentity-id-size=32  
+
+}}}
+
+and we used 12 threads to import, it took 128hours15minutes and an outofMemory occurred at the end. And we took another 54hours and 53minutes to do a data restore for using the database. 
+
+when 
+
+{{{
+ -Xmx60G -Xms30G -Druleset=empty -Dentity-index-size=800000000 -Dcache-memory=20000m  -DenablePredicateList=false -Dtuple-index-memory=20000m -DftsIndexPolicy=never  -Dbuild-pcsot=false -Dbuild-ptsoc=false  -Djournaling=true -Drepository-type=file-repository  -XX:+HeapDumpOnOutOfMemoryError -Dentity-id-size=32
+}}}
+
+and we use 3 threads to import, it took 82hours and 2 minutes successfully to import DDBJ. 
+
+
 
 ||loadtime|| Cell Cycle Ontology || Allie || PDBj || UniProt || DDBJ ||
-|| 1st time || 3mins || 28mins ||197mins  ||3555mins  ||  ||
+|| 1st time || 3mins || 28mins ||197mins  ||3555mins  ||4922mins  ||
 || 2nd time || 3mins || 30mins ||219mins  ||  ||  ||
 || average || 3mins || 29mins ||208mins  ||  || ||