バージョン 6 から バージョン 7 における更新: data

更新日時:

2015/01/05 14:27:48 (10 年 前)

更新者:

wu

コメント:

--

data

@@ -1 +1 @@
 
 == Query ==
-Query 1:
+Query 1: Find the genes related to diabetes.
 
 
@@ -15 +15 @@
 
 
-Query 2:
+Query 2: find out all the drugs, which are substrate of some enzyme, their category and reaction.
 {{{
 PREFIX kegg: <http://bio2rdf.org/kegg_vocabulary:>
@@ -55 +55 @@
 ?side dcterms:title ?side_effect.
 
- ?drug2 drugbank:category drugbank:Anti-Allergic-Agents.
- ?drug2 drugbank:x-pubchemcompound ?cpd.
-
+ ?drug_drugbank drugbank:category drugbank:Anti-Allergic-Agents.
+ ?drug_drugbank drugbank:x-pubchemcompound ?cpd.
+  ?drug_drugbank drugbank:half-life ?halflife.
+   ?drug_drugbank drugbank:brand ?brand
+  ?drug_drugbank drugbank:product  ?product.
 
 }
@@ -63 +65 @@
 
 }}}
+
+
+Query 4: Find the side effect and pathway of the anticonvulsants 
+
+{{{
+PREFIX dcterms: <http://purl.org/dc/terms/>
+PREFIX sider:  <http://bio2rdf.org/sider:>
+PREFIX sider_vocab: <http://bio2rdf.org/sider_vocabulary:>
+PREFIX sider_resource: <http://bio2rdf.org/sider_resource:>
+PREFIX drugbank: <http://bio2rdf.org/drugbank_vocabulary:>
+PREFIX pubchem: <http://bio2rdf.org/pubchem.compound:>
+PREFIX dbowl: <http://dbpedia.org/ontology/>
+PREFIX kegg: <http://bio2rdf.org/kegg_vocabulary:>
+
+select *
+where{
+
+ ?drug_drugbank drugbank:category drugbank:Anticonvulsants.
+ ?drug_drugbank drugbank:affected-organism ?affected.
+ ?drug_drugbank drugbank:x-pubchemcompound ?cpd.
+
+?drug sider_vocab:side-effect ?side.
+?drug sider_vocab:pubchem-flat-compound-id ?cpd.
+?side dcterms:title ?side_effect.
+
+?drug_kegg kegg:x-pubchem.compound ?cpd.
+ ?drug_kegg kegg:pathway  ?pathway.}
+
+}}}