バージョン 90 から バージョン 91 における更新: summarize

差分発生行の前後
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2012/11/22 13:59:31 (12 年 前)
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wu
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  • summarize

    v90 v91  
    33||  Endpoint     || Cell Cycle Ontology|| Allie || PDBj  || UniProt || DDBJ || 
    44|| Virtuoso(min) ||4 || 47   ||  92  || # 41hs28mins     || 79hs19mins     || 
    5 || OWLIM-SE(min)  || 3 || 29   ||  208  || #59hs15mins     ||49hs49mins    || 
    6 || Bigdata(min)  || 3  || 37   ||  421  ||  # 85hs38mins    ||   X   || 
     5|| OWLIM-SE(min)  ||   || 
     6|| Bigdata(min)  ||    || 
    77|| 4Store (min)  || 2 || 12   || 4834   ||   #   ||   #   ||  
    88|| Mulgara(min)  || 10 ||86   ||   X   ||    X   ||    X   || 
     
    1010  
    1111 Virtuoso: # It needs another 17 hours to decompress and split the data set. 
    12  
    13  OWLIM-SE: # This is the cost time we loaded it successfully first and we are testing another time. 
    14  
    15  Bigdata: # Here it is the cost to load only uniport.rdf.gz (3.16 billion triples) without including the other files such as uniref.rdf.gz, uniparc.rdf.gz and other files because of a bad scalability after finishing importing  uniport.rdf.gz. 
    1612 
    1713 4store: # We do not test 4Store on larger data set because its scalability is not ideal. From about 100M Allie data set to 500M PDBJ data set the time cost increases 500 times.  
     
    3329       
    3430|| Endpoint             || case1 ||case2|| case3|| case4|| case5|| case6 ||case7|| case8|| case9|| case10|| case11 ||case12|| case13|| case14|| case15|| case16 ||case17|| case18|| case19|| 
    35 ||Virtuoso (ms)         || '''24'''|| '''2'''|| 23280||3||42500||13073||5||7562||41||2||120||19||5||1||56058||'''46'''||'''15'''||'''16'''||16721|| 
    36 ||OWLIM-SE(ms)           ||110|| 6||2472||'''2'''||149||2071||'''2'''||'''33'''||'''22'''||'''0'''||'''6'''||'''6'''||'''2'''||'''0'''||46129||X||X||X||'''14''' || 
    37 ||Bigdata(ms)           || 331 ||42|| 3135|| 16 ||414 ||1191|| 21|| 97 ||43|| 14|| 23|| 43|| 13|| 13|| '''19093'''||X||X||X|| 37|| 
    38 ||4Store (ms)           ||  56|| 18|| '''1236'''|| 13|| '''33'''|| '''64'''|| 22|| 67|| 2035|| 7|| '''6'''|| 1563|| 8 ||7|| * ||X||X||X|| 15 || 
     31||Virtuoso (ms)         || '''24'''|| '''2'''|| 23280||3||42500||13073||5||7562||41||2||120||19||5||'''1'''||56058||'''46'''||'''15'''||'''16'''||16721|| 
     32||OWLIM-SE(ms)           ||121|| 9|| 2740 ||5|| 149|| 1722|| '''3'''|| '''39'''|| '''25''' ||'''1'''|| 6|| 47|| '''2'''|| '''1''' ||52779 ||'''7''' ||'''4''' ||24 ||17 || 
     33||Bigdata(ms)           || 282 ||35 ||3247|| 13|| 52|| 3320|| 11|| 93|| 47|| 10 ||20|| 27|| 5|| 6|| '''18126'''|| X||X||X|| 30|| 
     34||4Store (ms)           ||  56|| 18|| '''1236'''|| 13|| '''33'''|| '''64'''|| 22|| 67|| 2035|| 7|| '''6'''|| 1563|| 8 ||7|| * ||X||X||X|| '''15''' || 
    3935|| Mulgara(ms)          ||  1294     ||  20     ||   2207  ||   9  ||    343  ||2325|| 32|| 58||33||4||14||X||9||6||X||X||X||X||38|| 
     36 
    4037 
    4138 X or * shows that the endpoint does not support "count()" function or some unsupported function causes a wrong result. 
     
    4744The data shows that in the cell cycle queries on the 10 million or so triples: 
    4845 
    49 (1)Virtuoso supports more query. In some cases Virtuoso response fast but some others cost far more than others, such as case5 and case19; 
     46(1)Virtuoso and OWLIM-SE supports more query. In some cases Virtuoso response fast but some others cost far more than others, such as case5 and case19; 
    5047 
    5148(2)Except that OwlimSE cannot support count() function, it totally perform better and has no worst case;