| 1 | from mako import runtime, filters, cache |
|---|
| 2 | UNDEFINED = runtime.UNDEFINED |
|---|
| 3 | __M_dict_builtin = dict |
|---|
| 4 | __M_locals_builtin = locals |
|---|
| 5 | _magic_number = 5 |
|---|
| 6 | _modified_time = 1287725326.8172879 |
|---|
| 7 | _template_filename=u'templates/base_panels.mako' |
|---|
| 8 | _template_uri=u'/base_panels.mako' |
|---|
| 9 | _template_cache=cache.Cache(__name__, _modified_time) |
|---|
| 10 | _source_encoding=None |
|---|
| 11 | _exports = ['message_box_content', 'overlay', 'late_javascripts', 'stylesheets', 'init', 'masthead', 'javascripts'] |
|---|
| 12 | |
|---|
| 13 | |
|---|
| 14 | def render_body(context,**pageargs): |
|---|
| 15 | context.caller_stack._push_frame() |
|---|
| 16 | try: |
|---|
| 17 | __M_locals = __M_dict_builtin(pageargs=pageargs) |
|---|
| 18 | self = context.get('self', UNDEFINED) |
|---|
| 19 | __M_writer = context.writer() |
|---|
| 20 | # SOURCE LINE 2 |
|---|
| 21 | __M_writer(u'<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN" "http://www.w3.org/TR/html4/loose.dtd">\n\n') |
|---|
| 22 | # SOURCE LINE 4 |
|---|
| 23 | |
|---|
| 24 | self.has_left_panel=True |
|---|
| 25 | self.has_right_panel=True |
|---|
| 26 | self.message_box_visible=False |
|---|
| 27 | self.overlay_visible=False |
|---|
| 28 | self.message_box_class="" |
|---|
| 29 | self.active_view=None |
|---|
| 30 | self.body_class="" |
|---|
| 31 | |
|---|
| 32 | |
|---|
| 33 | # SOURCE LINE 12 |
|---|
| 34 | __M_writer(u'\n \n') |
|---|
| 35 | # SOURCE LINE 16 |
|---|
| 36 | __M_writer(u'\n\n') |
|---|
| 37 | # SOURCE LINE 37 |
|---|
| 38 | __M_writer(u'\n\n') |
|---|
| 39 | # SOURCE LINE 48 |
|---|
| 40 | __M_writer(u'\n\n') |
|---|
| 41 | # SOURCE LINE 151 |
|---|
| 42 | __M_writer(u'\n\n') |
|---|
| 43 | # SOURCE LINE 156 |
|---|
| 44 | __M_writer(u'\n\n') |
|---|
| 45 | # SOURCE LINE 191 |
|---|
| 46 | __M_writer(u'\n\n') |
|---|
| 47 | # SOURCE LINE 195 |
|---|
| 48 | __M_writer(u'\n\n') |
|---|
| 49 | # SOURCE LINE 198 |
|---|
| 50 | __M_writer(u'<html>\n ') |
|---|
| 51 | # SOURCE LINE 199 |
|---|
| 52 | __M_writer(unicode(self.init())) |
|---|
| 53 | __M_writer(u' \n <head>\n <title>') |
|---|
| 54 | # SOURCE LINE 201 |
|---|
| 55 | __M_writer(unicode(self.title())) |
|---|
| 56 | __M_writer(u'</title>\n <meta http-equiv="Content-Type" content="text/html; charset=utf-8" />\n ') |
|---|
| 57 | # SOURCE LINE 203 |
|---|
| 58 | __M_writer(unicode(self.stylesheets())) |
|---|
| 59 | __M_writer(u'\n ') |
|---|
| 60 | # SOURCE LINE 204 |
|---|
| 61 | __M_writer(unicode(self.javascripts())) |
|---|
| 62 | __M_writer(u'\n </head>\n \n <body scroll="no" class="') |
|---|
| 63 | # SOURCE LINE 207 |
|---|
| 64 | __M_writer(unicode(self.body_class)) |
|---|
| 65 | __M_writer(u'">\n\t<div id="everything" style="position: absolute; top: 0; left: 0; width: 100%; height: 100%; min-width: 600px;">\n') |
|---|
| 66 | # SOURCE LINE 210 |
|---|
| 67 | __M_writer(u' <div id="background"></div>\n') |
|---|
| 68 | # SOURCE LINE 212 |
|---|
| 69 | __M_writer(u' <div id="masthead">\n ') |
|---|
| 70 | # SOURCE LINE 213 |
|---|
| 71 | __M_writer(unicode(self.masthead())) |
|---|
| 72 | __M_writer(u'\n </div>\n <div id="messagebox" class="panel-') |
|---|
| 73 | # SOURCE LINE 215 |
|---|
| 74 | __M_writer(unicode(self.message_box_class)) |
|---|
| 75 | __M_writer(u'-message">\n') |
|---|
| 76 | # SOURCE LINE 216 |
|---|
| 77 | if self.message_box_visible: |
|---|
| 78 | # SOURCE LINE 217 |
|---|
| 79 | __M_writer(u' ') |
|---|
| 80 | __M_writer(unicode(self.message_box_content())) |
|---|
| 81 | __M_writer(u'\n') |
|---|
| 82 | # SOURCE LINE 219 |
|---|
| 83 | __M_writer(u' </div>\n ') |
|---|
| 84 | # SOURCE LINE 220 |
|---|
| 85 | __M_writer(unicode(self.overlay())) |
|---|
| 86 | __M_writer(u'\n') |
|---|
| 87 | # SOURCE LINE 221 |
|---|
| 88 | if self.has_left_panel: |
|---|
| 89 | # SOURCE LINE 222 |
|---|
| 90 | __M_writer(u' <div id="left">\n ') |
|---|
| 91 | # SOURCE LINE 223 |
|---|
| 92 | __M_writer(unicode(self.left_panel())) |
|---|
| 93 | __M_writer(u'\n </div>\n <div id="left-border">\n <div id="left-border-inner" style="display: none;"></div>\n </div>\n') |
|---|
| 94 | # SOURCE LINE 229 |
|---|
| 95 | __M_writer(u' <div id="center">\n ') |
|---|
| 96 | # SOURCE LINE 230 |
|---|
| 97 | __M_writer(unicode(self.center_panel())) |
|---|
| 98 | __M_writer(u'\n </div>\n') |
|---|
| 99 | # SOURCE LINE 232 |
|---|
| 100 | if self.has_right_panel: |
|---|
| 101 | # SOURCE LINE 233 |
|---|
| 102 | __M_writer(u' <div id="right-border"><div id="right-border-inner" style="display: none;"></div></div>\n <div id="right">\n ') |
|---|
| 103 | # SOURCE LINE 235 |
|---|
| 104 | __M_writer(unicode(self.right_panel())) |
|---|
| 105 | __M_writer(u'\n </div>\n') |
|---|
| 106 | # SOURCE LINE 238 |
|---|
| 107 | __M_writer(u'\t</div>\n') |
|---|
| 108 | # SOURCE LINE 240 |
|---|
| 109 | __M_writer(u' </body>\n') |
|---|
| 110 | # SOURCE LINE 243 |
|---|
| 111 | __M_writer(u' ') |
|---|
| 112 | __M_writer(unicode(self.late_javascripts())) |
|---|
| 113 | __M_writer(u'\n</html>\n') |
|---|
| 114 | return '' |
|---|
| 115 | finally: |
|---|
| 116 | context.caller_stack._pop_frame() |
|---|
| 117 | |
|---|
| 118 | |
|---|
| 119 | def render_message_box_content(context): |
|---|
| 120 | context.caller_stack._push_frame() |
|---|
| 121 | try: |
|---|
| 122 | __M_writer = context.writer() |
|---|
| 123 | # SOURCE LINE 194 |
|---|
| 124 | __M_writer(u'\n') |
|---|
| 125 | return '' |
|---|
| 126 | finally: |
|---|
| 127 | context.caller_stack._pop_frame() |
|---|
| 128 | |
|---|
| 129 | |
|---|
| 130 | def render_overlay(context,title='',content=''): |
|---|
| 131 | context.caller_stack._push_frame() |
|---|
| 132 | try: |
|---|
| 133 | self = context.get('self', UNDEFINED) |
|---|
| 134 | __M_writer = context.writer() |
|---|
| 135 | # SOURCE LINE 158 |
|---|
| 136 | __M_writer(u'\n ') |
|---|
| 137 | # SOURCE LINE 159 |
|---|
| 138 | __M_writer(u'\n ') |
|---|
| 139 | # SOURCE LINE 160 |
|---|
| 140 | __M_writer(u'\n\n <div id="overlay"\n') |
|---|
| 141 | # SOURCE LINE 163 |
|---|
| 142 | if not self.overlay_visible: |
|---|
| 143 | # SOURCE LINE 164 |
|---|
| 144 | __M_writer(u' style="display: none;"\n') |
|---|
| 145 | # SOURCE LINE 166 |
|---|
| 146 | __M_writer(u' >\n') |
|---|
| 147 | # SOURCE LINE 168 |
|---|
| 148 | __M_writer(u' <div id="overlay-background" style="position: absolute; width: 100%; height: 100%;"></div>\n \n') |
|---|
| 149 | # SOURCE LINE 171 |
|---|
| 150 | __M_writer(u' <table class="dialog-box-container" border="0" cellpadding="0" cellspacing="0"\n') |
|---|
| 151 | # SOURCE LINE 172 |
|---|
| 152 | if not self.overlay_visible: |
|---|
| 153 | # SOURCE LINE 173 |
|---|
| 154 | __M_writer(u' style="display: none;"\n') |
|---|
| 155 | # SOURCE LINE 175 |
|---|
| 156 | __M_writer(u' ><tr><td>\n <div class="dialog-box-wrapper">\n <div class="dialog-box">\n <div class="unified-panel-header">\n <div class="unified-panel-header-inner"><span class=\'title\'>') |
|---|
| 157 | # SOURCE LINE 179 |
|---|
| 158 | __M_writer(unicode(title)) |
|---|
| 159 | __M_writer(u'</span></div>\n </div>\n <div class="body">') |
|---|
| 160 | # SOURCE LINE 181 |
|---|
| 161 | __M_writer(unicode(content)) |
|---|
| 162 | __M_writer(u'</div>\n <div>\n <div class="buttons" style="display: none; float: right;"></div>\n <div class="extra_buttons" style="display: none; padding: 5px;"></div>\n <div style="clear: both;"></div>\n </div>\n </div>\n </div>\n </td></tr></table>\n </div>\n') |
|---|
| 163 | return '' |
|---|
| 164 | finally: |
|---|
| 165 | context.caller_stack._pop_frame() |
|---|
| 166 | |
|---|
| 167 | |
|---|
| 168 | def render_late_javascripts(context): |
|---|
| 169 | context.caller_stack._push_frame() |
|---|
| 170 | try: |
|---|
| 171 | h = context.get('h', UNDEFINED) |
|---|
| 172 | self = context.get('self', UNDEFINED) |
|---|
| 173 | __M_writer = context.writer() |
|---|
| 174 | # SOURCE LINE 51 |
|---|
| 175 | __M_writer(u'\n') |
|---|
| 176 | # SOURCE LINE 54 |
|---|
| 177 | __M_writer(u' ') |
|---|
| 178 | __M_writer(unicode(h.js( 'jquery.event.drag', 'jquery.event.hover', 'jquery.form', 'jquery.rating', 'galaxy.base', 'galaxy.panels' ))) |
|---|
| 179 | __M_writer(u'\n <script type="text/javascript">\n \n ensure_dd_helper();\n \n') |
|---|
| 180 | # SOURCE LINE 59 |
|---|
| 181 | if self.has_left_panel: |
|---|
| 182 | # SOURCE LINE 60 |
|---|
| 183 | __M_writer(u' var lp = make_left_panel( $("#left"), $("#center"), $("#left-border" ) );\n force_left_panel = lp.force_panel;\n') |
|---|
| 184 | # SOURCE LINE 63 |
|---|
| 185 | __M_writer(u' \n') |
|---|
| 186 | # SOURCE LINE 64 |
|---|
| 187 | if self.has_right_panel: |
|---|
| 188 | # SOURCE LINE 65 |
|---|
| 189 | __M_writer(u' var rp = make_right_panel( $("#right"), $("#center"), $("#right-border" ) );\n handle_minwidth_hint = rp.handle_minwidth_hint;\n force_right_panel = rp.force_panel;\n') |
|---|
| 190 | # SOURCE LINE 69 |
|---|
| 191 | __M_writer(u' \n </script>\n') |
|---|
| 192 | # SOURCE LINE 72 |
|---|
| 193 | __M_writer(u' <![if !IE]>\n <script type="text/javascript">\n var upload_form_error = function( msg ) {\n if ( ! $("iframe#galaxy_main").contents().find("body").find("div[class=\'errormessage\']").size() ) {\n $("iframe#galaxy_main").contents().find("body").prepend( \'<div class="errormessage" name="upload_error">\' + msg + \'</div><p/>\' );\n } else {\n $("iframe#galaxy_main").contents().find("body").find("div[class=\'errormessage\']").text( msg );\n }\n }\n jQuery( function() {\n $("iframe#galaxy_main").load( function() {\n $(this).contents().find("form").each( function() { \n if ( $(this).find("input[galaxy-ajax-upload]").length > 0 ){\n $(this).submit( function() {\n // Only bother using a hidden iframe if there\'s a file (e.g. big data) upload\n var file_upload = false;\n $(this).find("input[galaxy-ajax-upload]").each( function() {\n if ( $(this).val() != \'\' ) {\n file_upload = true;\n }\n });\n if ( ! file_upload ) {\n return true;\n }\n // Make a synchronous request to create the datasets first\n var async_datasets;\n var upload_error = false;\n $.ajax( {\n async: false,\n type: "POST",\n url: "') |
|---|
| 194 | # SOURCE LINE 102 |
|---|
| 195 | __M_writer(unicode(h.url_for(controller='/tool_runner', action='upload_async_create'))) |
|---|
| 196 | __M_writer(u'",\n data: $(this).formSerialize(),\n dataType: "json",\n success: function(array_obj, status) {\n if (array_obj.length > 0) {\n if (array_obj[0] == \'error\') {\n upload_error = true;\n upload_form_error(array_obj[1]);\n } else {\n async_datasets = array_obj.join();\n }\n } else {\n // ( gvk 1/22/10 ) FIXME: this block is never entered, so there may be a bug somewhere\n // I\'ve done some debugging like checking to see if array_obj is undefined, but have not\n // tracked down the behavior that will result in this block being entered. I believe the\n // intent was to have this block entered if the upload button is clicked on the upload\n // form but no file was selected.\n upload_error = true;\n upload_form_error( \'No data was entered in the upload form. You may choose to upload a file, paste some data directly in the data box, or enter URL(s) to fetch data.\' );\n }\n }\n } );\n if (upload_error == true) {\n return false;\n } else {\n $(this).find("input[name=async_datasets]").val( async_datasets );\n $(this).append("<input type=\'hidden\' name=\'ajax_upload\' value=\'true\'>");\n }\n // iframe submit is required for nginx (otherwise the encoding is wrong)\n $(this).ajaxSubmit( { iframe: true } );\n if ( $(this).find("input[name=\'folder_id\']").val() != undefined ) {\n var library_id = $(this).find("input[name=\'library_id\']").val();\n var show_deleted = $(this).find("input[name=\'show_deleted\']").val();\n if ( location.pathname.indexOf( \'admin\' ) != -1 ) {\n $("iframe#galaxy_main").attr("src","') |
|---|
| 197 | # SOURCE LINE 136 |
|---|
| 198 | __M_writer(unicode(h.url_for( controller='library_common', action='browse_library' ))) |
|---|
| 199 | __M_writer(u'?cntrller=library_admin&id=" + library_id + "&created_ldda_ids=" + async_datasets + "&show_deleted=" + show_deleted);\n } else {\n $("iframe#galaxy_main").attr("src","') |
|---|
| 200 | # SOURCE LINE 138 |
|---|
| 201 | __M_writer(unicode(h.url_for( controller='library_common', action='browse_library' ))) |
|---|
| 202 | __M_writer(u'?cntrller=library&id=" + library_id + "&created_ldda_ids=" + async_datasets + "&show_deleted=" + show_deleted);\n }\n } else {\n $("iframe#galaxy_main").attr("src","') |
|---|
| 203 | # SOURCE LINE 141 |
|---|
| 204 | __M_writer(unicode(h.url_for(controller='tool_runner', action='upload_async_message'))) |
|---|
| 205 | __M_writer(u'");\n }\n return false;\n });\n }\n });\n });\n });\n </script>\n <![endif]>\n') |
|---|
| 206 | return '' |
|---|
| 207 | finally: |
|---|
| 208 | context.caller_stack._pop_frame() |
|---|
| 209 | |
|---|
| 210 | |
|---|
| 211 | def render_stylesheets(context): |
|---|
| 212 | context.caller_stack._push_frame() |
|---|
| 213 | try: |
|---|
| 214 | h = context.get('h', UNDEFINED) |
|---|
| 215 | self = context.get('self', UNDEFINED) |
|---|
| 216 | __M_writer = context.writer() |
|---|
| 217 | # SOURCE LINE 19 |
|---|
| 218 | __M_writer(u'\n ') |
|---|
| 219 | # SOURCE LINE 20 |
|---|
| 220 | __M_writer(unicode(h.css('base','panel_layout','jquery.rating'))) |
|---|
| 221 | __M_writer(u'\n <style type="text/css">\n #center {\n') |
|---|
| 222 | # SOURCE LINE 23 |
|---|
| 223 | if not self.has_left_panel: |
|---|
| 224 | # SOURCE LINE 24 |
|---|
| 225 | __M_writer(u' left: 0;\n') |
|---|
| 226 | # SOURCE LINE 26 |
|---|
| 227 | if not self.has_right_panel: |
|---|
| 228 | # SOURCE LINE 27 |
|---|
| 229 | __M_writer(u' right: 0;\n') |
|---|
| 230 | # SOURCE LINE 29 |
|---|
| 231 | __M_writer(u' }\n') |
|---|
| 232 | # SOURCE LINE 30 |
|---|
| 233 | if self.message_box_visible: |
|---|
| 234 | # SOURCE LINE 31 |
|---|
| 235 | __M_writer(u' #left, #left-border, #center, #right-border, #right\n {\n top: 64px;\n }\n') |
|---|
| 236 | # SOURCE LINE 36 |
|---|
| 237 | __M_writer(u' </style>\n') |
|---|
| 238 | return '' |
|---|
| 239 | finally: |
|---|
| 240 | context.caller_stack._pop_frame() |
|---|
| 241 | |
|---|
| 242 | |
|---|
| 243 | def render_init(context): |
|---|
| 244 | context.caller_stack._push_frame() |
|---|
| 245 | try: |
|---|
| 246 | __M_writer = context.writer() |
|---|
| 247 | # SOURCE LINE 14 |
|---|
| 248 | __M_writer(u'\n') |
|---|
| 249 | return '' |
|---|
| 250 | finally: |
|---|
| 251 | context.caller_stack._pop_frame() |
|---|
| 252 | |
|---|
| 253 | |
|---|
| 254 | def render_masthead(context): |
|---|
| 255 | context.caller_stack._push_frame() |
|---|
| 256 | try: |
|---|
| 257 | __M_writer = context.writer() |
|---|
| 258 | # SOURCE LINE 154 |
|---|
| 259 | __M_writer(u'\n') |
|---|
| 260 | return '' |
|---|
| 261 | finally: |
|---|
| 262 | context.caller_stack._pop_frame() |
|---|
| 263 | |
|---|
| 264 | |
|---|
| 265 | def render_javascripts(context): |
|---|
| 266 | context.caller_stack._push_frame() |
|---|
| 267 | try: |
|---|
| 268 | h = context.get('h', UNDEFINED) |
|---|
| 269 | __M_writer = context.writer() |
|---|
| 270 | # SOURCE LINE 40 |
|---|
| 271 | __M_writer(u'\n <!--[if lt IE 7]>\n ') |
|---|
| 272 | # SOURCE LINE 42 |
|---|
| 273 | __M_writer(unicode(h.js( 'IE7', 'ie7-recalc' ))) |
|---|
| 274 | __M_writer(u'\n <![endif]-->\n <script type="text/javascript">\n var image_path = \'') |
|---|
| 275 | # SOURCE LINE 45 |
|---|
| 276 | __M_writer(unicode(h.url_for("/static/images"))) |
|---|
| 277 | __M_writer(u"';\n </script>\n ") |
|---|
| 278 | # SOURCE LINE 47 |
|---|
| 279 | __M_writer(unicode(h.js( 'jquery' ))) |
|---|
| 280 | __M_writer(u'\n') |
|---|
| 281 | return '' |
|---|
| 282 | finally: |
|---|
| 283 | context.caller_stack._pop_frame() |
|---|
| 284 | |
|---|
| 285 | |
|---|