1 | <tool id="pbed2ldindepconvert" name="Convert plink pbed to ld reduced format" version="0.01"> |
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2 | <!-- <description>__NOT_USED_CURRENTLY_FOR_CONVERTERS__</description> --> |
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3 | <!-- Used on the metadata edit page. --> |
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4 | <command interpreter="python"> |
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5 | pbed_ldreduced_converter.py '$input1.extra_files_path/$input1.metadata.base_name' '60' '55' '0.1' '$output1' '$output1.files_path' 'plink' |
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6 | </command> |
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7 | <inputs> |
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8 | <page> |
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9 | <param format="pbed" name="input1" type="data" label="Choose a compressed Plink binary format genotype file"/> |
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10 | </page> |
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11 | </inputs> |
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12 | <outputs> |
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13 | <data format="ldindep" name="output1" metadata_source="input1"/> |
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14 | </outputs> |
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15 | <help> |
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16 | </help> |
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17 | </tool> |
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18 | |
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