1 | <tool id="pbed2lpedconvert" name="Convert plink pbed to linkage lped" version="0.01">
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2 | <!-- <description>__NOT_USED_CURRENTLY_FOR_CONVERTERS__</description> -->
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3 | <!-- Used on the metadata edit page. -->
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4 | <command interpreter="python">
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5 | pbed_to_lped_converter.py '$input1.extra_files_path/$input1.metadata.base_name'
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6 | '$output1' '$output1.files_path' 'plink'
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7 | </command>
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8 | <inputs>
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9 | <param format="pbed" name="input1" type="data" label="Choose compressed Plink binary format genotype file"/>
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10 | </inputs>
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11 | <outputs>
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12 | <data format="lped" name="output1" metadata_source="input1"/>
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13 | </outputs>
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14 | <help>
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15 | </help>
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16 | </tool>
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