root/galaxy-central/templates/workflow/build_from_current_history.mako

リビジョン 2, 4.3 KB (コミッタ: hatakeyama, 14 年 前)

import galaxy-central

行番号 
1<%inherit file="/base.mako"/>
2
3<% _=n_ %>
4
5<%def name="title()">Extract workflow from history</%def>
6
7<%def name="stylesheets()">
8    ${h.css( 'history', 'base' )}
9    <style type="text/css">
10    div.toolForm{
11        margin-top: 10px;
12        margin-bottom: 10px;
13    }
14    div.historyItem {
15        margin-right: 0;
16    }
17    th {
18        border-bottom: solid black 1px;
19    }
20    </style>
21</%def>
22
23<%def name="javascripts()">
24    ${parent.javascripts()}
25    <script type="text/javascript">
26    $(function() {
27        $("#checkall").click( function() {
28            $("input[type=checkbox]").attr( 'checked', true );
29            return false;
30        }).show();
31        $("#uncheckall").click( function() {
32            $("input[type=checkbox]").attr( 'checked', false );
33            return false;
34        }).show();
35    });
36    </script>
37</%def>
38
39<%def name="history_item( data, creator_disabled=False )">
40    %if data.state in [ "no state", "", None ]:
41        <% data_state = "queued" %>
42    %else:
43        <% data_state = data.state %>
44    %endif
45    <div class="historyItemWrapper historyItem historyItem-${data_state}" id="historyItem-$data.id">
46        <table cellpadding="0" cellspacing="0" border="0" width="100%">
47            <tr>
48                %if data_state != 'ok':
49                    <td style="width: 20px;">
50                        <div style='padding-right: 5px;'><img src="${h.url_for( str( '/static/style/data_%s.png' % data_state ) )}" border="0" align="middle"></div>
51                    </td>
52                %endif
53                <td>
54                    <div style="overflow: hidden;">
55                        <span class="historyItemTitle"><b>${data.hid}: ${data.display_name()}</b></span>
56                    </div>
57                </td>
58            </tr>
59        </table>
60        %if disabled:
61            <hr>
62            <div><input type="checkbox" name="dataset_ids" value="${data.hid}" checked="true" />${_('Treat as input dataset')}</div>
63        %endif
64    </div>
65</%def>
66
67<p>The following list contains each tool that was run to create the
68datasets in your current history. Please select those that you wish
69to include in the workflow.</p>
70
71<p>Tools which cannot be run interactively and thus cannot be incorporated
72into a workflow will be shown in gray.</p>
73
74%for warning in warnings:
75    <div class="warningmark">${warning}</div>
76%endfor
77
78<form method="post" action="${h.url_for()}">
79<div class='form-row'>
80    <label>${_('Workflow name')}</label>
81    <input name="workflow_name" type="text" value="Workflow constructed from history '${history.name}'" size="60"/>
82</div>
83<p>
84    <input type="submit" value="${_('Create Workflow')}" />
85    <button id="checkall" style="display: none;">Check all</button>
86    <button id="uncheckall" style="display: none;">Uncheck all</button>
87</p>
88
89<table border="0" cellspacing="0">
90   
91    <tr>
92        <th style="width: 47.5%">${_('Tool')}</th>
93        <th style="width: 5%"></th>
94        <th style="width: 47.5%">${_('History items created')}</th>
95    </tr>
96
97%for job, datasets in jobs.iteritems():
98
99    <%
100    cls = "toolForm"
101    tool_name = "Unknown"
102    if hasattr( job, 'is_fake' ) and job.is_fake:
103        cls += " toolFormDisabled"
104        disabled = True
105    else:   
106        tool = app.toolbox.tools_by_id.get( job.tool_id, None )
107        if tool:
108            tool_name = tool.name
109        if tool is None or not( tool.is_workflow_compatible ):
110            cls += " toolFormDisabled"
111            disabled = True
112        else:
113            disabled = False
114    %>
115   
116    <tr>
117        <td>
118            <div class="${cls}">
119
120                <div class="toolFormTitle">${tool_name}</div>
121                <div class="toolFormBody">
122                    %if disabled:
123                        <div style="font-style: italic; color: gray">This tool cannot be used in workflows</div>
124                    %else:
125                        <div><input type="checkbox" name="job_ids" value="${job.id}" checked="true" />Include "${tool_name}" in workflow</div>
126                    %endif
127                </div>
128            </div>
129        </td>
130        <td style="text-align: center;">
131            &#x25B6;
132        </td>
133        <td>
134            %for _, data in datasets:
135                <div>${history_item( data, disabled )}</div>     
136            %endfor
137        </td>
138    </tr>
139
140%endfor
141
142</table>
143
144</form>
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