root/galaxy-central/test-data/2_mod.bed

#chr    name    score   strand  start   end
chr1    NM_005997_cds_0_0_chr1_147962193_r      0       -       147962192       147962580
chr1    BC007833_cds_0_0_chr1_147984546_f       0       +       147984545       147984630
chr1    AJ011123_cds_0_0_chr1_148078401_r       0       -       148078400       148078582
chr1    NM_002796_cds_0_0_chr1_148185137_f      0       +       148185136       148185276
chr10   AY029205_cds_0_0_chr10_55251624_r       0       -       55251623        55253124
chr11   AK057832_cds_0_0_chr11_116124408_r      0       -       116124407       116124501
chr11   NM_000040_cds_1_0_chr11_116206509_f     0       +       116206508       116206563
chr11   BC005380_cds_0_0_chr11_116211734_r      0       -       116211733       116212337
chr11   AY358331_cds_0_0_chr11_130745912_f      0       +       130745911       130745993
chr12   NM_052885_cds_0_0_chr12_38440095_r      0       -       38440094        38440321
chr12   AY792511_cds_0_0_chr12_38905201_f       0       +       38905200        38905351
chr13   NM_207440_cds_1_0_chr13_112381695_f     0       +       112381694       112381953
chr13   NM_032116_cds_0_0_chr13_29680677_r      0       -       29680676        29680875
chr14   U88895_cds_0_0_chr14_98521865_f 0       +       98521864        98521922
chr14   NM_022898_cds_0_0_chr14_98710241_r      0       -       98710240        98712285
chr15   BX537418_cds_0_0_chr15_41486873_r       0       -       41486872        41487060
chr15   AK223365_cds_0_0_chr15_41673709_f       0       +       41673708        41673857
chr15   NM_153700_cds_0_0_chr15_41679162_r      0       -       41679161        41679250
chr15   AK223365_cds_0_0_chr15_41773541_f       0       +       41773540        41773689
chr16   NM_005332_cds_0_0_chr16_142909_f        0       +       142908  143003
chr16   BC065198_cds_0_0_chr16_179198_r 0       -       179197  179339
chr16   AK057165_cds_2_0_chr16_244414_f 0       +       244413  244681
chr16   AB016929_cds_0_0_chr16_259269_r 0       -       259268  259383
chr18   NM_001792_cds_0_0_chr18_23786115_r      0       -       23786114        23786321
chr18   NM_012397_cds_1_0_chr18_59406882_f      0       +       59406881        59407046
chr18   AB046400_cds_0_0_chr18_59455933_r       0       -       59455932        59456337
chr18   AY792326_cds_0_0_chr18_59528408_f       0       +       59528407        59528575
chr19   BC013995_cds_1_0_chr19_59068596_f       0       +       59068595        59069564
chr19   NM_198481_cds_0_0_chr19_59236027_r      0       -       59236026        59236146
chr19   NM_004542_cds_0_0_chr19_59297999_f      0       +       59297998        59298008
chr19   AK128544_cds_3_0_chr19_59318206_r       0       -       59318205        59318718
chr2    NM_006773_cds_0_0_chr2_118288584_f      0       +       118288583       118288668
chr2    BC005078_cds_0_0_chr2_118390396_r       0       -       118390395       118390500
chr2    AY125465_cds_0_0_chr2_220108690_f       0       +       220108689       220109267
chr2    NM_024536_cds_0_0_chr2_220229610_r      0       -       220229609       220230869
chr20   NM_181466_cds_0_0_chr20_33330414_r      0       -       33330413        33330423
chr20   BC085019_cds_1_0_chr20_33485371_f       0       +       33485370        33486123
chr20   NM_000557_cds_1_0_chr20_33488492_r      0       -       33488491        33489122
chr20   AF022655_cds_1_0_chr20_33513607_f       0       +       33513606        33513792
chr21   NM_032910_cds_0_0_chr21_32687403_f      0       +       32687402        32687588
chr21   NM_018277_cds_3_0_chr21_32869642_r      0       -       32869641        32870022
chr21   NM_005806_cds_1_0_chr21_33321041_f      0       +       33321040        33322012
chr21   AK129657_cds_0_0_chr21_33728359_r       0       -       33728358        33728724
chr22   NM_004147_cds_0_0_chr22_30120224_f      0       +       30120223        30120265
chr22   BC032941_cds_0_0_chr22_30160420_r       0       -       30160419        30160661
chr22   NM_001007467_cds_1_0_chr22_30228825_f   0       +       30228824        30228916
chr22   CR456540_cds_0_0_chr22_30340152_r       0       -       30340151        30340376
chr5    AF099740_cds_11_0_chr5_131311207_r      0       -       131311206       131311254
chr5    NM_000588_cds_0_0_chr5_131424299_f      0       +       131424298       131424460
chr5    BC035813_cds_0_0_chr5_131556602_r       0       -       131556601       131556672
chr5    BC003096_cds_0_0_chr5_131621327_f       0       +       131621326       131621419
chr6    NM_007214_cds_0_0_chr6_108299601_r      0       -       108299600       108299744
chr6    NM_003269_cds_0_0_chr6_108594663_f      0       +       108594662       108594687
chr6    NM_003795_cds_0_0_chr6_108640046_r      0       -       108640045       108640151
chr6    NM_145315_cds_0_0_chr6_108722977_f      0       +       108722976       108723115
chr7    AF467257_cds_1_0_chr7_113660518_f       0       +       113660517       113660685
chr7    NM_003391_cds_0_0_chr7_116512160_r      0       -       116512159       116512389
chr7    NM_000492_cds_0_0_chr7_116714100_f      0       +       116714099       116714152
chr7    AF377960_cds_0_0_chr7_116945542_r       0       -       116945541       116945787
chr8    NM_000127_cds_0_0_chr8_118881132_r      0       -       118881131       118881317
chr9    BC051300_cds_0_0_chr9_128764157_f       0       +       128764156       128764189
chr9    NM_014908_cds_0_0_chr9_128787520_r      0       -       128787519       128789136
chr9    NM_015354_cds_0_0_chr9_128789553_f      0       +       128789552       128789584
chr9    AB058751_cds_0_0_chr9_128850517_r       0       -       128850516       128850624
chrX    NM_001167_cds_1_0_chrX_122745048_f      0       +       122745047       122745924
chrX    NM_000425_cds_0_0_chrX_152648965_r      0       -       152648964       152649196
chrX    AF101728_cds_0_0_chrX_152691447_f       0       +       152691446       152691471
chrX    BC052303_cds_0_0_chrX_152694030_r       0       -       152694029       152694263