root/galaxy-central/test-data/5.maf

リビジョン 2, 180.4 KB (コミッタ: hatakeyama, 14 年 前)

import galaxy-central

行番号 
1##maf version=1
2a score=64549.0
3s hg17.chr1     147962192 9 + 245522847 TCATTTAAT
4s panTro1.chr1  129698808 9 + 229575298 TCATTTAAT
5s mm5.chr3       65458475 7 - 160575607 --ATTTGAT
6s rn3.chr2       68236843 7 - 258222147 --ATTTGAT
7s canFam1.chr17  62929731 9 +  66886099 TTATTTGAT
8
9a score=37247.0
10s hg17.chr1     147962201 43 + 245522847 GACAATTTTCTGGCGCAAGGCTCGGGGCCCAGAGCCAGGGAGG
11s panTro1.chr1  129698817 43 + 229575298 GACAATTTTCTGGCGCAAGGCTCGGGGCCCAGAGCCAGGGAGG
12s mm5.chr3       65458482 43 - 160575607 GACAATCTTCTGACGCAAGGCTCGAGGCCCAGAGCCAGGTAGT
13s rn3.chr2       68236850 43 - 258222147 GACAATCTTCTGACGCAAGGCTCGGGGCCCAGCGCCAGGGAGT
14s canFam1.chr17  62929740 43 +  66886099 GACAATTTTCTGGCGCAAGGCTCGGGGCCCAGAACCAGGGAGG
15s danRer1.chr10  19400803 43 +  25436222 GGCGCTCTGCTTGAGCACAGCTTTGGGTCGTGCGCTCTTCAAA
16
17a score=1000.0
18s hg17.chr1     147962244 1 + 245522847 G
19s panTro1.chr1  129698860 1 + 229575298 G
20s mm5.chr3       65458525 1 - 160575607 G
21s rn3.chr2       68236893 1 - 258222147 G
22s canFam1.chr17  62929783 1 +  66886099 G
23
24a score=0.0
25s hg17.chr1 147962244 3 + 245522847 GGC
26
27a score=3000.0
28s hg17.chr1     147962245 2 + 245522847 GC
29s panTro1.chr1  129698861 2 + 229575298 GC
30s mm5.chr3       65458526 2 - 160575607 GC
31s rn3.chr2       68236894 2 - 258222147 GC
32s canFam1.chr17  62929784 2 +  66886099 GC
33s fr1.chrUn     290886762 2 + 349519338 GC
34
35a score=18092.0
36s hg17.chr1     147962247 26 + 245522847 TCAGGAGGTGGCGGGCCGGGGCC-----CAG
37s panTro1.chr1  129698863 26 + 229575298 TCAGGAGGTGGCGGGCCAGGGCC-----CAG
38s mm5.chr3       65458528 26 - 160575607 TCGGGGGGTGGGGGCCCGGGGCC-----CAG
39s rn3.chr2       68236896 26 - 258222147 TCGGGGGGTGGGGGCCCGGGGCC-----CAG
40s canFam1.chr17  62929786 26 +  66886099 TCGGGAGGTGGTGGGCCAGGGCC-----CAG
41s fr1.chrUn     290886764 26 + 349519338 TGATGAGGAATCGAGTCCTGTGG-----CAG
42s danRer1.chr10  19400846 31 +  25436222 TTAGCAGGTGAATCGCTAGCGTCGGTGTTAG
43
44a score=219213.0
45s hg17.chr1     147962273 178 + 245522847 GGCTGAGGCAGTGGGCGGCAGTCCATGGGCAGTAATGTACTTCTTGTAAGCCTCACGAATGATCTTGAAGGCTCGAGCAGTGGCATAGGGTATGTCTGTAACAGGGTCCCGGTATAGGGCTGGACGATGGGTCACTGGACAGACCTCACGAACAGGGACTTTTGGG---GGCCGCCCTTGG
46s panTro1.chr1  129698889 178 + 229575298 GGCTGAGGCAGTGGGCGGCAGTCCATGGGCAGTAATGTACTTCTTGTAAGCCTCACGAATGATCTTGAAGGCTCGAGCAGTGGCATAGGGTATGTCTGTAACAGGGTCCCGGTATAGGGCTGGACGATGGGTCACTGGACAAACCTCACGAACAGGGACTTTTGGG---GGCCGCCCTTGG
47s mm5.chr3       65458554 178 - 160575607 CGCCGAGGCGGTGGGTGGAAGTCCGTGGGCAGTGATGTACTTCTTGTACGCCTCACGGATGATCTTGAAGGCTCTAGCAGTGGCATAGGGTATGTCTGTAACAGGGTCCCGGTACAAAGCTGGACGGTGGGTCACTGGGCAGACCTCCCGCACCGGGACCTTCGGG---GGTCGCCCCTGG
48s rn3.chr2       68236922 178 - 258222147 CGCTGAGGCAGTGGGTGGTAGTCCGTGGGCAGTGATGTACTTCTTGTACGCCTCACGGATGATCTTGAAGGCTCTAGCAGTGGCATAGGGTATGTCTGTAACAGGGTCCCGGTACAAAGCTGGACGGTGGGTCACTGGGCAGACCTCCCGAACAGGGACCTTTGGT---GGTCGCCCTTGG
49s canFam1.chr17  62929812 178 +  66886099 GGCTGAGGCAGTGGGCGGCAGTCCGTGGGCAGTGATGTACTTCTTGTAGGCCTCACGGATGATCTTGAAGGCTCGAGCAGTGGCGTAGGGGATGTCTGTGACAGGGTCCCGGTACAGGGCTGGGCGATGGGTCACGGGGCAGACCTCCCGAACAGGGACCTTTGGG---GGCCGGCCTTGG
50s fr1.chrUn     290886790 179 + 349519338 CTCCAGG--AGTGTTTGGGAAGCCGTGTGCAGCCACGTATTTACGGTAAGCTTCTCGGATGATGCGGAAGGCTCGTGCGTTAGCATAAGGTATGTCTGTGACCGGATCTCTGTACAGTGCGATCTTATGCGTGACGGGACAAATCTCCTGGACGGGCAGCTGAGGGCTCGGCTGCCCCTTG
51s danRer1.chrUn 128306408 178 - 367113659 GGATGGGCCAGTGCAGGGCAGGCCATGAGCAGCCACATACTTCTTATAGGCCTCCCGAATTATCCTGAAGGCCTGTACATTAGCGTAAGGAATGTCAGTGATGGGGTCCCGGTAGAGCGCAGGCTTATGGGTAACAGGACAGACCTCCTGGACAGGTACTCGAGGA---GCAGGCGACTGG
52
53a score=84843.0
54s hg17.chr1     147962451 56 + 245522847 GGGAACCATTCCTCGAAAGTTGCATCATCACTAAAAGTGATGAAGGTACGTGAGCA
55s panTro1.chr1  129699067 56 + 229575298 GGGAACCATTCCTCGAAAGTTGCATCATCACTAAAAGTGATGAAGGTACGTGAGCA
56s mm5.chr3       65458732 56 - 160575607 GGGAACCACTCTTCAAACGTTGCATCATCACTGAACGTGATGAAGGTGCGAGAGCA
57s rn3.chr2       68237100 56 - 258222147 GGGAACCATTCTTCAAACGTGGCATCATCACTGAATGTGATGAAGGTACGTGAGCA
58s canFam1.chr17  62929990 56 +  66886099 GGAAACCATTCCTCAAATGTTGCATCATCACTAAAAGTGATGAAAGTACGCGAGCA
59s galGal2.chrUn  96971568 56 + 165033910 GGGGAAGAACGTTCGAAGGTTTCGTCGTCGCTGAAGGCATTGAAGGTGCGCGAGCA
60s fr1.chrUn     290886972 56 + 349519338 GAAAAGGCCACCTTAAAAGCTTCGTCGTCGCTGAACGTGATGTAAGTACGGGAGCA
61s danRer1.chrUn 128306586 56 - 367113659 GGAAAGACACGCTGGAAGGACTCATCATCACTGAATGTGATGTAGGTGCGAGAGCA
62
63a score=25539.0
64s hg17.chr1     147962507 63 + 245522847 GCG-----AGCAGGGGGGTTGA------------CGGGT------CCAGTCCCAGCATG--AGGAGTCAATGCAGACACCGAGGGAG-C
65s panTro1.chr1  129699123 63 + 229575298 GCG-----AGCAGGGGGGTTGA------------CGGGT------CCAGTCCCAGCATG--AGGAGTCAATGCAGAAGGGGAGGGAG-C
66s mm5.chr3       65458788 75 - 160575607 GTG-----AGCAGGAGGGGTGGCAGCGGCAGCTCCAGTC------CCGGTCCCAGCATG--TGGAGCCAGTGCAGAGGCTGTAGGAG-C
67s rn3.chr2       68237156 63 - 258222147 GTG-----AGGAGGAGGGACGG------------CAGGT------CCAGTGCCAGCATG--TGCAGTCAGTGCAGAGGACGTAGGAG-C
68s canFam1.chr17  62930046 63 +  66886099 GCG-----AGGTGGAGGGACAA------------CGGGT------CCAGTGCCGGCATG--GGGAGTCAGTGCAGAAGCTGTGGGAG-T
69s galGal2.chrUn  96971633 66 + 165033910 GCA-----GGCCGGGGCTGCGG------------CCGGG------GCGGCGTCTGCCTGCTGCGGGTCCTGGTCCAACCTGCAAGAGCC
70s danRer1.chrUn 128306646 74 - 367113659 GTGTTTACAGCAGCTGTGTTTG------------TGAATGGGACACCGGGTGCTGCGGA--AAGCGTTGATTCGGACTGGGAAAGAG-C
71
72a score=14242.0
73s hg17.chr1     147962570 10 + 245522847 AGGATCAAGT
74s panTro1.chr1  129699186 10 + 229575298 AGGATCAAGT
75s mm5.chr3       65458863 10 - 160575607 AGGATCAAGG
76s rn3.chr2       68237219 10 - 258222147 AGGATCAAGT
77s canFam1.chr17  62930109 10 +  66886099 AGGATCCAGC
78s galGal2.chrUn  96971699 10 + 165033910 GGGGTCAGCT
79
80a score=550634.0
81s hg17.chr1     147984545 85 + 245522847 ATGGCGTCGGCCTCCTCCGGGCCGTCGTCTTCGGTCGGTTTTTCATCCTTTGATCCCGCGGTCCCTTCCTGTACCTTGTCCTCAG
82s panTro1.chr1  129723125 85 + 229575298 ATGGCGTCGGCCTCCTCCGGGCCGTCGTCTTCGGTCGGTTTTTCATCCTTTGATCCCGCGGTCCCTTCCTGTACCTCGTCCTCAG
83s mm5.chr3       65474800 76 - 160575607 ATGGCGTCCGCCTCCTCAGGGCCAGCG---GCGGCCGGGTTTTCATCCCTTGATGCCGGGGCCCCTGCTGGTA------CCGCAG
84s rn3.chr2       68255714 76 - 258222147 ATGGCGTCCGCCTCCTCAGGGCCAGCG---GCGGCGGGGTTTTCACCCCTTGATTCCGGGGTCCCTGCCGGTA------CCGCAG
85s canFam1.chr17  62947719 82 +  66886099 ATGGCGTCGGCCTCCTCTGGGCCGTCG---GCGGCTGGGGTTTCATCCTTTGATCCCGGGGTCCCTTCCTGTGCTTCGGCTTCAG
86
87a score=365854.0
88s hg17.chr1     148078400 182 + 245522847 TCACATGATGCCGTTGGTGAGGTACTGGAAGCCGTCATAGAGTTTGGTGGTGATAGACCGCATACTGCCATCCACCATCTGCTCCACCAGCAGCTGCAGCTGCTCCTCAGTCATGCTCAT-GTGGAACCTCTCTTTGAGGTTTCGAATGGTGCTGGAGCCATGGAAGCAAGGAAGCTGAGA-AC
89s panTro1.chr1  129830209 182 + 229575298 TCACATGATGCCGTTGGTGAGGTACTGGAAGCCGTCATAGAGTTTGGTGGTGATAGACCGCATACTGCCATCCACCATCTGCTCCACCAGCAGCTGCAGCTGCTCCTCAGTCATGCTCAT-GTGGAACCTCTCTTTGAGGTTTCGAATGGTGCTGGAGCCATGGAAGCAAGGAAGCTGAGA-AC
90s mm5.chr3       65575311 182 - 160575607 TCACATGATGCCATTGGTGAGGTACTGGAAGCCATCGTAGAGTTTGGTGGTGATGGACCTCATGCTGCCGTCCACCATCTGCTCCACCAGCAGCTGCAGCTGCTCCTCAGTCATGCTCAT-GTGGAACCTCTCTTTGAGGTTGCGAATGGTGCTGGAGCCATGGAAGCAAGGAAGCTGAGA-AC
91s rn3.chr2       68356506 182 - 258222147 TCACATGATGCCATTGGTGAGGTACTGGAAGCCATCGTAGAGTTTGGTGGTGATGGACCTCATGCTGCCGTCCACCATCTGCTCCACCAGCAGCTGCAGCTGCTCCTCAGTCATGCTCAT-GTGGAACCTCTCTTTGAGGTTGCGAATGGTGCTGGAGCCATGGAAGCAAGGAAGCTGAGA-AC
92s canFam1.chr17  63050241 182 +  66886099 TCACATGATGCCATTGGTGAGGTACTGGAAGCCGTCATAGAGTTTGGTGGTGATAGACCGCATGCTGCCATCTACCATCTGCTCCACCAGCAGCTGGAGCTGCTCCTCAGTCATGCTCAT-GTGGAACCGCTCTTTGAGGTTGCGGATGGTGCTGGAGCCATGGAAGCAAGGAAGCTGAGA-AC
93s galGal2.chrUn  96994100 182 + 165033910 TCACATGATGCCGTTGGTGAGGTACTGGAAGCCGTCGTACAGTTTGGTGGTGATGGAGCGCATGCTGCCGTCCACCATCTGCTCCACCAGCAGCTGCAGCTGCTCCTCCGTCATGTTCAT-GTGGAAGCGCTCCTTCAGGTTGCGGATGGTGCTGGAGCCGTGGAAGCAGGGGAGCTGCGA-GC
94s fr1.chrUn     196934251 182 - 349519338 TCACATGATTCCATTTGTCAGGTACTGGAAGCCGTCGTAGAGTTTGGTCGTCAGCGACCTCATCGAGCCCTCGACCAGCTGATCGATCAGCAGCTGGAGCTGCTCCTCTGTCAGACTCAT-GTGGAAACGTTCCTTCAAACCCCGCATGGTGCTCGACCCGTGGAAACACGGCAGCTGGGA-CC
95s danRer1.chrNA  19436521 184 - 390413307 TCACATGATACCGTTGGTCAGATACTGGAAGCCGTCGTACAGTTTGGTAGTGATGGAGCGCATGGAGCCGTCCACCATCTGCTCCACCAGCACCTGCAGGTGCTCCTCCGATAAGTACATGGGGGAATAACTCCTTCAGGTTGCGGATAGTGCTGGAGCCATGGAAGCGAGGGAGCTGTGACAC
96
97a score=172494.0
98s hg17.chr1     148185136 140 + 245522847 ATGGAAGCGTTTTTGGGGTCGCGGTCCGGACTTTGGGCGGGGGGTCCGGCCCCAGGACAGTTTTACCGCATTCCGTCCACTCCCGATTCCTTCATGGATCCGGCGTCTGCACTTTACAGAGGTCCAATCACGCGGACCCA
99s panTro1.chr1  129935611 140 + 229575298 ATGGAGGCGTTTTTGGGGTCGCGGTCCGGACTTTGGGCGGGGTGTCCGGCCCCAGGACAGTTTTACCGCATTCCGTCCACTCCCGATTCCTTCATGGATCCGGCGTCTGCACTTTACAGAGGTCCAATCACGCGGACCCA
100s mm5.chr3       65694347 140 - 160575607 ATGGAAGCGTTTTGGGAGTCACGGGCTGGCCACTGGGCCGGGGGTCCGGCTCCAGGGCAGTTTTACCGCATCCCGGCCACCCCCAGCGGCCTCATGGACCCGGCGTCGGCGCCCTGCGAGGGTCCCATCACTCGGACCCA
101s rn3.chr2       68486927 140 - 258222147 ATGGAAGCGTTTTGGGAGTCACGGACTGGCCACTGGGCCGGGGGTCCGGCTCCGGGGCAGTTTTACCGCGTCCCGTCCACCCCCAGCTGCCTCATGGATCCGATGTCTGCGCCCTGCGAGGGTCCCATCACTCGGACCCA
102s canFam1.chr17  63150913 140 +  66886099 ATGGAAGCCTTTCTGGAGTCGCGGTCCAGAGTTTGGGCCGGTGGTCCCGCCCCGGGGCAGTTTTACCACATCCCGCCTAGTTCCGTCGCCTCCGTGGAGCCGGCGTTTTCTCCTTACGGGGGTCCGGTTACGCGCACGCA
103
104a score=69091.0
105s hg17.chr10    55251623 116 + 135413628 TTACAGTGAAGTAGATTGACTGTGAGATTGTTTTTCAGTTCCCTCGACAATATTGTTCAAACTC--------CC------CTTGTTTTGTTCAGATGTGA----TTTCCATATTTGTTA------CTTCTGAAG-GGCACA----
106s panTro1.chr8  56162651 116 + 138322177 TTACAGTGAAGTAGATTGACTGTGAGATTGTTTTTCAGTTCCCTCGACAATATTGTTCAAATTC--------TC------CTTGTTTTGTGCAAATGTGA----TTTCCATATTTGTTA------CGTCCGAAG-GGCACA----
107s mm5.chr10     56176594 116 - 130633972 TTACAAAGATGTTGATTGACTGTGAGGTTGCACGTCAATTCCCTCAACAACTCTAACCAACGTT--------TC------CTGGCTCTGGTCATGTGTGA----TTTTCATGCCTGTTT------TCTCTGCAG-GGCAAA----
108s rn3.chr20     14526840 116 +  55296979 TTACAAGGACGTTGACTGACTGTGAGTTTGCACGTCAATCCCTTCAACAACTCTAACCAACGTT--------TC------CTGGCTCTGGTCACATGTGA----TTTTCATGTTTGTTT------TCTCTGCAG-GACAAA----
109s canFam1.chr26  4431080 116 -  41009621 TTACAGTGAAGTAGATTGACTGTGAGATTGGTTCTCCGTTTCCTCGGCAAAACTGTGCAAATTC--------CC------CTGGGGTTGTTGAGACGTCA----CGTCCACATTTTCTC------TCTCTGGAG-GGCAAC----
110s galGal2.chr6  27913521 123 -  33893787 TTACAGTGCTGTCGACTGAGATGGAAAGCGTTTCTCAAGCTCCTCCACAACACAGCTCAAGTTG--------CCGTTCTGCTGGTTGTGCTCAGCTGCAG----CCTCGGGAGTTGGCA------GCTCTGGCGTTGCAAC----
111s danRer1.chr12  3415306 139 +  24175710 TCACAGAACAGTGGACTGAGATGGAAAGCGTTTCTCCAGCTCCTCCACTACTGAGTTCATGCTTGGATTGGGCT------CTGATGGTGGTCCTTCTTGAGCAGGCTCCGCCTCTGTTACACCAGCCTCTGGTTCGACAGACACT
112
113a score=137977.0
114s hg17.chr10    55251739 126 + 135413628 TAGTTTGAAGTTCTGAAACATTTGTGCGTAGA---TAGTTTTTTTCTATTTGACTGTACATGTTAG-CTACTGATTTTTCAAGTTCTGCTAAGTTTTTAACGTGTCTGAGGATGCCTTTTGGTTCTCTCT
115s panTro1.chr8  56162767 127 + 138322177 TAGTTTGAAGTTCTGAAACATTTGTGCGTAGA---TAGTTTTTTTCTATTTGACTGTACATGTTAGACTACTGATTTTTCAAGTTCTGCTAAGTTTTTAACATGTCTGAGGATGCCTTTTGGTTCTCTCT
116s mm5.chr10     56176710 126 - 130633972 ACGTGTGTAGTTTTGAGGGATCTGCAGGTGGG---CAGTTTTTTTCTATGTGACTGTACATGTTAG-ACACTGATTTCTCGAGCTCTGCCAAGTTTTTCACATGTCTGAGGATCCCTTTTGGATGTCTGT
117s rn3.chr20     14526956 126 +  55296979 AGGGGTGGAGTTTTGAGAGCTCTGTGGGTGGA---CAGTTTTTCTCGATGTGACTGTACATGTTAG-ACACCGATTTCTCGAGCTCTGCCAGGTTTTTCACGTGCCTGAGGATCCCTTTGGGATGTCTGT
118s canFam1.chr26  4431196 126 -  41009621 TTGTCTCTAGTTTCCAGCTGTGTGTTGCTGGA---AAGTTTTTTTCTATTTGACTGTACATGTTAG-CAACTGACTTTTCAAGGTCCGCTAAGTTTTTTATATGCTTGAGGATGCCCTTTGGTTGTTTCT
119s galGal2.chr6  27913644 128 -  33893787 TGGTTTG-AGCTTAGAGATGTGCTTGGGCAGAACGTGGTTTTTGTCTATTTGGCTGTACATATTGG-CCACGGACTTTTCAATCGCTGCTAAATTCTGAATGTTTTTAAGAATACCTTTCAGCTCCCTAC
120s fr1.chrUn      9089644 117 + 349519338 TAGGATGAAGCTTGGGCACCTT---------G---TAGTTTTTGTCTACTTGGCTGTACATGTTGG-CAATGGACCTCTCTATGTCAGCGAGATTCTGGATGTTTTTCAGGATCCCTTTGAGCTCCTTTT
121s danRer1.chr12  3415445 124 +  24175710 -----TGCGGTTTAGGGTTGATCACTAGTGGGCGCTGCTTTTTATCTATTTGACTGTACATATTGG-CAACAGATTTCTCGATGTCTGCTATGTTCTGGAGGTTCTTAAGGATCCCCTTGAGTTCCCTCT
122
123a score=13160.0
124s hg17.chr10     55251865 17 + 135413628 GAGGGTCTGTTTTACAC
125s panTro1.chr8   56162894 17 + 138322177 GAGGGTCTGTTTTACAC
126s mm5.chr10      56176836 17 - 130633972 GGGGTTCTGCCCCCCAC
127s rn3.chr20      14527082 17 +  55296979 GGGGTTCCGCCCCACAC
128s canFam1.chr26   4431322 17 -  41009621 GGGGGTCTGTGTCACAC
129s galGal2.chr6   27913772 17 -  33893787 GGGGAGGTGGCTCTGGC
130s fr1.chrUn     137770001 14 + 349519338 GAGGA---GTTTCGGGC
131s danRer1.chr12   3415572 17 +  24175710 GAGGCTCTGGCTCAGAC
132
133a score=14118.0
134s hg17.chr10     55251882 71 + 135413628 ACTG---TCGTTGTTGATAGCTGTGTCATAGAGGACTTAATTTTCTCGGCAGGCATCAAGTTGGTCGT-GCATTT
135s panTro1.chr8   56162911 71 + 138322177 ACTG---TCGTTGTTGATAGCTGTGTCATAGAGGACTTAATTTTCTCGGCAGGCATCATGTTGGTCGT-GCATTC
136s mm5.chr10      56176853 71 - 130633972 TGCGGGTTGGATGCTGGTGGCTGTGTCGTA---GACGTGGTTTCTCTGGCGTGTGTGGCACTGGCAGT-GCATTT
137s rn3.chr20      14527099 71 +  55296979 GGTGGGTTGGATGCTGGTGGCTGTGTCGTA---GACATAGTTTCTCTGGCGTGTGTGACACTGGCAGT-GCATTT
138s canFam1.chr26   4431339 74 -  41009621 ACGGTCGTGGATGCTGGTAGCTGTGCGACAGAGGGCTCCACGTCCTCGGCAGGTGTCACACTGACAGT-GTGCTT
139s galGal2.chr6   27913789 44 -  33893787 ACTGCGGCCGGTGGTGGTA------------------------------CAGCTGGCTGTTTGGCAGG-GGATTT
140s fr1.chrUn     137770015 54 + 349519338 TCTGTAGTGGGAGCAGGGG--------------------GTGGTGTTGGCCGGAGAGACACTGGCCGCAGCGTT-
141
142a score=9016.0
143s hg17.chr10     55251953 19 + 135413628 AACACCTGTTATACAGACA
144s panTro1.chr8   56162982 19 + 138322177 AACACCTGTTATACAGACA
145s mm5.chr10      56176924 19 - 130633972 AGCAGCTGGTGCAGAGATG
146s rn3.chr20      14527170 19 +  55296979 AGCAGCTGGTGTAGAGATG
147s canFam1.chr26   4431413 19 -  41009621 CACAACTGGTACACAGACA
148s fr1.chrUn     137770069 19 + 349519338 GGTGCCTCCGAAAGGGACG
149
150a score=71637.0
151s hg17.chr10    55251972 300 + 135413628 CACTCTGTGGACAGAAATGAAGCTgaaggaggtggagggcaaggaatagaaggaggtggt---ggaggaagaggagttggaaatggaggtagaagaggtggTGTTGGGGGACCAGACGTTGAAACGGAAAGTGGAAAAAATGTaggaggaggaagaggaagagggatagaaggaggagagggaggaggacaaaaaagagaaaaaggagaaatgtcaggaggaggagcaagaggagcaggagcaggaggaggagaaggaggagaaataggaggaggagggggaaggggaCAGGCAGAAGGAGAG
152s panTro1.chr8  56163001 276 + 138322177 CTCTCTGTGGACAGAAATGAAGCTgaaggaggtggagggcaaggaatagaaggaggtggt---ggaggaagaggagttggaaatggaggtagaagaggtggTGTTGGGGGACCAGACGTTGAAATGGAAAGTGGAAAAAATG------------------------TagaaggaggagagggaggaggacaaaaaagagaaaaaggagaaatgtcaggaggaggagcaagaggagcaggagcaggaggaggagaaggaggagaaataggagaaggaggaggaaggggaCAGGCAGAAGGAGAG
153s mm5.chr10     56176943 243 - 130633972 CTGTCTGTGGATGGAATGGACGTGGAAGGAGGCTGTGGGAAGAGGCGGGGAGCTGGTGGCCGAGGAGGAGGAGGAAGTGACAGTGGAGGAGGAAGAGGTAGAGAAGAAGTAGGGGGTGTAGAAATGGGAA---GAGAAAATGTAACAAGTTGTGGGGGAGGAGGGTTAGGGGGAGAAAGGGGAAGAGG---------------------------------------AAAAGTGGTAAAGGCAATGGGAGGTCTAGG---------AAGAGGCGGATGTGGGAGGGG---------AGCAGAG
154s rn3.chr20     14527189 243 +  55296979 CTGTCTGTGGATGGGACGGAAGTGGAAGGAGGCAGTGGGAAAAGGCGGGGAGCTGGTGGTCGAGGAGGAGGAGGAAGTGATGGTGGAGGAGGAGGAGGAAGAGAAGAGGCGGGGGTTGTAGAAATGGGAA---GAGAAAATGTAAGAAGTTGGGGGCGAGGAGGGTTAGGGGAAGAAAGGGGAAGAGG---------------------------------------AAAAGTAGTAAAGGCAATAGGAGGTTGAGG---------AAGAGGCAGCTGTGGGAGGGG---------AGCAGAG
155s canFam1.chr26  4431432 195 -  41009621 CACGTAGTGGATGGAGCCCAAGACGGAGGGGACAgaggagaaggaagaggaggtgatggt---ggggggagggag---ggaagtgaaggtagaagaggtgatg------------------------------gagaagaag---------agggaggagaaggtggggtggaaagtgggagaaatgg---------------------------aggtggaggaggaagaggaggaggaggaggaggaggggcagg---------------------------tgg---------aggagAG
156
157a score=139704.0
158s hg17.chr10    55252272 227 + 135413628 ATGTTTGGTGGATGGGCAAAATTTTCAAAAATATTTCTTTCGGTTTCAATAGGTAACATA------CAAATAGGTGTCTCTCTCCTAGAGAGTGAAGAATGTAAAACACAAGGCCTT---GAAGGAGAAAGTTCCAAGGAACACTCAGCAGGAGAACTGATGACATTAGGTTCT------GATTTGAGTTCCACAGTTCTTGAAACAGTTGGCAAAGTGGAGAATGAGAAGTGAGGCCTGGG
159s panTro1.chr8  56163277 227 + 138322177 ATGTTTGGTGGATGGGCAAAATTTTCAAACATATTTCTTTCGGTTTCAACAGGTAACATA------CAAATAGGTGTCGCTCTCCTAGAGAGTGAAGAATTTAAAACACAAGGCCTT---GAAGGAGAAAGTTCCAAGGAACACTCAGCAGGAGAACTGATGACATTAGGTTCT------GATTTGAGTTCCACAGTTCTTGAAACAGTTGGCAAAGTGGAGAATGAGAAGTGAGGCCTGGG
160s mm5.chr10     56177186 230 - 130633972 ATGCTAGGTGGATGGGGAGCGATCTCAAAAGAGTTCCTTTTTGGTTCTGTATCTGATGCA------CATGTGGGAGTCTCTCTCTTAGAGCTTAAGGAGTTTAAAATACGGGGTCTCAGAGGAGGAGAAAGTTCCAAGGTGCAGTCAGCGGGAGAAGTGACCACATTAGGTTCC------GACCCGAGTTCCACCGCTCTGGAAATCGTTGGCAGAGTTGAGAAAGAAAAGTGAGACCAAGA
161s rn3.chr20     14527432 230 +  55296979 ATGCTGGGTGGATGGGGAACCATTTCAAAAGAGTTCCTTTTTGTTTCTGTATCGGAGGCA------CAAGTGGGAGTCTCTCTCTTAGAGCCTAGGGAGTTTAAAACGCGGGGTCTCCGAGGAGGAGAAAGTTCCAAGGTGCAGTCAGCGGGAGAAGTGACAACGTCAGGTTCT------GACCCGAGTTCTACCGCTCTTGAAATTGTTGGTAGAGTTGAGAAAGAAAAGTGGGACCAAGA
162s canFam1.chr26  4431627 227 -  41009621 ATGTTTGGTGGTTTGGGAAGGATTTCGAAAATGTTCCTTCCGGCTTCAACTGTCAACAGA------CATGTGGGCATCTCTCTCCTAAAAACCGGGGAATTTAAAATGCAGGGCATT---GAAGGAGAAAGTTCCAAAGAACAGTCCGCGGGAGAGATGATGACATCAGGTTCT------GCCTGGAGTTCCACAGTTCTCGAAACAGTTGTCAAAGTGGAGTAGGAGGAGTGAGACGAAGG
163s galGal2.chr6  27913978 239 -  33893787 gTTTTAGGTGGGTCTGGAATGTTTTCTGTAACTTCTCCTTTGGTCTGAGGAGCTAGAAAACTTTGGCAAACGGGTTTCTTTATCCTAAAAGACGGAGGAGTTGGCTTGCGAGTTGGT---GGAGGAGAAAGTTCTTCAGGATAGTCATGGTGAGTGATGATTACAGAGGGGACCGCAGAGGGCTCCGGCTCAACTACTTCACAAGGTGTTGGAGAGGACAGAGGAGAAGAGCGAAGGCAAGG
164
165a score=27341.0
166s hg17.chr10    55252499 121 + 135413628 AAAGCAAAATG-------AAGAGTCT--G--------------------------AAGAGA------------------------------------GAGATTTCAACTGTTCTGTTCCTTCTATCATCAGTGTTTCACCTTGCCTTATTTCCTCTTTCTCTGTC-AAATTTGCCTCTTCAGTTGT--AAGCAAT
167s panTro1.chr8  56163504 121 + 138322177 AAAGCAAAATG-------AAGAGTCT--G--------------------------AAGAGA------------------------------------GAGATTTCAACTGTTCTCTTCCTTTCATAATCAGTGTGTCACCTTGCCTTATTTCCTCTTTCTCTGTC-AAATTTGCCTCTTCAGTTGT--AAGCAAT
168s mm5.chr10     56177416 118 - 130633972 GGAGGAAAAAG-------AAGAGCCA--G--------------------------AAGACA------------------------------------GAGATTTCAGCTGCTCTGTTTGCTGGACGATTAGGGTGTCTCTGTGTC---CCCCTTCTTTCTCTGAC-TCGTGGGCATCTTCAGTTGC--CAGCAGA
169s rn3.chr20     14527662 118 +  55296979 GGAGGAAAAAG-------AAGAGCCC--G--------------------------AAGACA------------------------------------GAGATTTCAGTTGCTCTGTTTGCTGTACGATTAGGGTGTCTCTGTGCC---CCCCTTCTTTCTCTGAC-CCACGGGCATCTTCGGTTGT--CACCATT
170s canFam1.chr26  4431854 121 -  41009621 AGAGAGAAATG-------AGGAGTCT--G--------------------------AAGACA------------------------------------GAGATTCCACATGCTGTGCTCCACGTGGGAGCAGGGGCTGGCCTGGCCTTGCTTCTCCTGTCTCGGGC-ACACTGGATTCTCCAGCTGC--AGGCAGG
171s galGal2.chr6  27914217 193 -  33893787 AGAAGCAAACACACTTTTAGGAGACT--GCTCTAGCGTGTTATCTCTTTCTTGCAAACAGATGCTGTGCGTTGGTGAACGGGTGGATTTGACATCAGGAGATTTCACTTGCTTCATTTCCTGCAAAGCCTGCTGCTCAAATTGTCTTGCCTTCTCTTTTACAGTTAACGTGGGGCCACTTATTTTTTGAAATAGT
172s danRer1.chr12  3416078 117 +  24175710 AAAACAGAGAG-------AATAATTTCGG--------------------------AAGAGA------------GTGACCCAC---------------GAGAGTCCTGACCTTGCCTCAACTTTAC-------GTCCTGCAAGGCC--------TGCTGCTCAAAC-TGTCGTGCCTGCTCTTTTAC--AGTCAAT
173
174a score=18054.0
175s hg17.chr10    55252620 34 + 135413628 GGATTGCTGCTACCTCTTTTGTTTGTACAGATTC
176s panTro1.chr8  56163625 34 + 138322177 GGATTGCTGCTACCTCTTTTGTTTGTACAGATTC
177s mm5.chr10     56177534 34 - 130633972 ACGTTGCTGCTACCTCTCTGGCTTGGGTGGCATC
178s rn3.chr20     14527780 34 +  55296979 AGGTTGCTGCTACCTTGCTGGCTTGGGTGGCATC
179s canFam1.chr26  4431975 34 -  41009621 GGGTTCCTACTACCTCTCTGGTTTGGAGGGGTTC
180s galGal2.chr6  27914410 34 -  33893787 GGACTGCTAATATCAACTCTGCTATGCTGATTTT
181
182a score=75824.0
183s hg17.chr10    55252654 151 + 135413628 CAGTGTTTTCATTTTCAGCTTTCTGCCTGGTGCCTTG------------CCACTGCTGCAGATCTATGATCTCTGGTCTATT----TGGAACT--TTCCTCATCAGCCTCCTGGGTAAGCTGACTGACTGACTCCACAGCCTCTGAATCTTTTCTCTTGGGCCCCTCAG-
184s panTro1.chr8  56163659 151 + 138322177 CAGTGTTTTCATTTTCAGCTTTCTGCCTGGTGCCTTG------------CCACTGCTGCAGATCTATGATCTCTGGTCTATT----TGGAACT--TTCCTCATCAGCCTCCTGGGTAAGCTGACTGACAGACTGCACAGCCTCTGAATCTTTTCTCTTGGGCCCCTCAG-
185s mm5.chr10     56177568 151 - 130633972 TGGCGCTTTCGCATTCAGCTCTCTGATTGGTGATCTG------------CCACTCCACCAGGTCTATGGTCTCTGGCCTGTT----TGGGGCT--TTCCACATGAGCCGCCTAGGAAAGCTCACAGACTGATTCCACACCCTCTGGATCTTTTCTCTTGGGCCCCTCAG-
186s rn3.chr20     14527814 151 +  55296979 TGGTTTTTTCGCATTCAGCTCTCTGCCTGGTGATCTG------------CCACTCCACTAGGTCTATGGTCTCTGGTCTGTT----TGGAGTT--TTCCACATCAGCCGCCTAGGAAACCTCACAGACTGATTCCACACCCTCTGGATCTTTTCTCTTGGGCCCCTCAG-
187s canFam1.chr26  4432009 151 -  41009621 CAGGGCTTTCCTTCCCACCTTCCGGCCTGCGGCTCCT------------CCGTGGCTCCAGCTCTAGGGTTTCTGGCCTTCT----GGGAAGT--TCCCACACTGGTCTCTGAGGGAAGCACACTGGCTGATGCCATATCCTCTGAAACATTTCCCTTGGGCCCCTCAG-
188s galGal2.chr6  27914444 139 -  33893787 CAGTTCCTTCATTCTCTGCTTTGAGTCTTTCCTGTTG------------CCACTGAACAGGGTCCATGATAACCGGCCTGCT----CAGAGAA--CCAGGCGCGTGCCTCTTAGTAACGTGAGCTGGTACTGTCCATGCACGGTGACT------------GCCTCCCAA-
189s danRer1.chr12  3416235 163 +  24175710 CAATCATCTCCTTGCTGTCCTTAAGGCTGGCCTTTAGCAGCTGCAGCTCCCACTGAACTGGATCCATCACCACCCTCCTACTCCGCTGAGATTCGTCCCACTTGTGCAACCGAG--AAGGTAATGTCCAG-----GAATGTCCTGAGCCTGAATTCGGGAATCCCATAAT
190
191a score=17919.0
192s hg17.chr10    55252805 66 + 135413628 AGACTTACTCTTGGCTTGTATTTTGGGTGAAAATGGGTCTACAAAATC---TGTTCTCTGTGAAATGTC
193s mm5.chr10     56177719 66 - 130633972 AGACTGACTCTTAACTTGTGTTCTGGGTGCCAACAGCTCTTCAAAATC---TGTTCGTGGCTGAAGGTC
194s rn3.chr20     14527965 66 +  55296979 GGACTGACTCTTAACTTGTGTTCTGGGTACAAATAGCTCTCCAAACTC---TGTTCCAGGCTGAAGGTC
195s canFam1.chr26  4432160 66 -  41009621 GGACTTACTCCTGGCTTGTGTTTTGGGCAAAAATGAGTCTATAAAATC---TGTTCTTAGTAAAAAGTC
196s galGal2.chr6  27914586 69 -  33893787 GGCATCTCTCAAGACTAATTGCATAGGAGAAAGAGTATCTAGGGCATCGCTTCTTTTCCGCAGTAACCC
197s danRer1.chr12  3416398 52 +  24175710 GGACTTACTCAGACCTCTCATACTGGGTGAATACATGTCTAAGAGGTA---ACTC--------------
198
199a score=243755.0
200s hg17.chr10    55252871 253 + 135413628 TGAATTTGTTGAT--------ACTTGACTTATGTTTTCCTTATAAAGGGGATTATGGGCACTTAAGTCATCCTCATCAGATAGAAATGTGAATTTTCTTGCAGACTTCAGTTTGTTGCTCTTAAGTGATCCGTCTACATGAGCTGACTTGTGAGCCTCAATAGTATTGGAAGAAAAGGGCATCACAACTTGTTGATGTTTCCTGTCTTCTGAGACTGAGTTATTTCCCCTGCTT--------TGTTGAAAATGGTAGAGAAGGA--------AAAGA
201s panTro1.chr8  56163914 253 + 138322177 TGAATTTGTTGAT--------ACTTGACTTATGTTTTCCTTATAAAGGGGATTATGGGCACTTAAGTCATCTTCATCAGATAGAAATGTGAATTTTCTTGCAGCCTTCAGTTTGTTGCTCTTAAGTGATCCGTCTACATGAGCTGACTTGTGAGCCTCAATAGTATTGGAAGAAAAGGGCATCACAACTTGTTGATGTTTCCTGTCTTCTGAGACTGAGTTATTTCCCCTGCTT--------TGTTGAAAATGGTAGAGAAGGA--------AAATA
202s mm5.chr10     56177785 253 - 130633972 TGAGTTTGTTGAC--------CTTTGACCTATACTTTCCATGTAAAGGGGATTATGGGTACTTAAGTTATCCTCATCAGGAACAAATGAGAACGTCCTTGCTGGGTTAGGCTGGCTCTCCTTAAGTGGTCCCTCTACATGAGCTGGCTCATGAGACTCAGTGGTACTGGAGGAAAAGGCCATCCCATCGCGATGACTGCTCCTGTCTTCTGGGACTGAGTTATTTCCCCTGCTT--------TGTTCAAAATGGTAGAGAAGGA--------AAAGA
203s rn3.chr20     14528031 250 +  55296979 GGAATTTGTTGAC--------CTTTGACCTATACTTTCCATATAAAGGGGGTTATGGGTACTTAAGTCATCCTCATCTGGAAGAAATGAGAACGTCCTTGCTGGGTTAGCTTGGTTG---TCAAGTGGTCCCTCTACATGAGCTGGCTCATGAGACTCAGTGGTACTGGAGGAAAAGGCCATCCCGTCACGATGACTGCTCCTGTCTTCCGGGACTGGGTTATTTCCCCTGCTT--------TGTTCAAAATGGTAGAGAAGGA--------AAAGA
204s canFam1.chr26  4432226 253 -  41009621 GGAGTTTGTTGGT--------CTTGGATCTACAGCTTCCTTATAAAGAGTACTGTGGAGACTGAAGGCGTCCTCCTCAGACATCAGTGTGAACTTCCTTGCTGACTTGGGCTGGTTGTTCCTAAGGGATCCATCTACATGAGCCTGCTTGTGAGCCTCAATAGTGCTGGAAGGAAAAGGCATCACACTGTGTGGACTTTTCCTGTCTTCTGAGACTGACTTATCTCCCCTGCTT--------TGTTGGAAATGGTAGAGAAGGA--------AAAGA
205s galGal2.chr6  27914655 253 -  33893787 AGCAGCAGCAGGA--------CTTTGAGTGACACCTTCCACATACAGTGGGTTTTGAGTAGTTAGTGGGTTCTCGTCAGATAAGAAAGTAATGTTACTTGAAGATTTGGGGAGGTTATTGTTCAATGATCCATTGATATTAGATTGCTTGTGAGCCTCAATAGCACGGGAAGCAAAGCTGCTTATAACTCTCTGCCGATCTCCTTCTTCTAAGACTGACTTTTTTCCCCTGCTT--------TGTTGGAAATGGTAGAGAAGAA--------AAAGA
206s danRer1.chr12  3416450 277 +  24175710 CGATTTTGGTGCTCAGGGCTGCCAAGAGTGACATCATCACGGTACAGGGGGTTGGTTGTAGTAAGTGGGTTGTCATCTGAAAGAAAGGTAATGTTGCTCTCCGACTTGGGAAAGTTGTTGAGCAGGATTCCGTTGGCGGTGGACAGCTTGTGAGCAGTGATAGCACGGGAAGCGAATGAGCTAATGAGACGCTGCCGATCACCATCCTTCAGAACACACCTCTTAGTCCTGATTTCAGCAAGTGTGGAAAGAGATAAAGATGAACTTAACAGAGAAT
207
208a score=136951.0
209s hg17.chr11    116124407 94 + 134452384 TTAC--ATATCCTCAACACTCCATTTGTAGGCAAGTTCCTCCACTGCCTTCTTGCTGGCAAGCCTGGCAAAGCGCTTCTGTTCAAATCCATTGGAT
210s panTro1.chr9  118123572 94 + 136640551 TTAC--ATATCCTCAACACTCCATTTGTAGGCAAGTTCCTCCACTGCCTTCTTGCTGGCAAGCCTGGCAAAGCGCTTCTGTTCAAATCCATTGGAT
211s mm5.chr9       77776147 94 - 124177049 TCAC--ATATCCTCCACACTCCACTTGTAGGCAAGCTCCTCCACAGCCTTCTTGCTGGCGAGCCTGGCAAAGCGCTTCTGTTCAAAGCCATTGGAT
212s rn3.chr8       79766056 94 - 129061546 TCAC--ATGTCCTCAACACTCCACTTGTAGGCAAGCTCCTCCACAGCTTTCTTGCTGGCAAGCCTGGCAAAGCGCTTCTGTTCAAAGCCATTGGAT
213s canFam1.chr5   72268290 94 -  92064832 TTAC--ATATCCTCAACACTCCACTTGTAGGCAAGTTCCTCCACCGCCTTCTTGCTGGCAAGCCTGGCAAAGCGCTTCTGTTCAAATCCATTGGAT
214s galGal2.chr24   4774582 96 +   5910111 TTGCGAAAGTCTTCAATGCTCCACTTGTATGCAAACTCCTGAGCTGCCTTCTTGTTGGCCATCCTGGCAAAGAACTGCTGCTCAAATCCATTGGAC
215s fr1.chrUn     206483220 94 + 349519338 TCAC--ATATCTTCTACACTCCACTTATAGGCTGCCTCCTGAGCAGCTCTTTTATCTGCCATTCTCTCATAGCGTTTCTTCTCAAAACCATTTGAC
216
217a score=311622.0
218s hg17.chr11   116206508 55 + 134452384 ATGCAGCCCCGGGTACTCCTTGTTGTTGCCCTCCTGGCGCTCCTGGCCTCTGCCC
219s panTro1.chr9 118206938 55 + 136640551 ATGCAGCCCCGGGTACTCCTTGTTGTTGCCCTCCTGGCGCTCCTGGCCTCTGCCC
220s mm5.chr9      77840023 55 - 124177049 ATGCAGCCCCGGACGCTCCTCACTGTGGCCCTCTTGGCTCTCCTGGCATCTGCCC
221s canFam1.chr5  72342544 55 -  92064832 ATGCAGCCCCGGGTCCTCCTCGTCGCTGCCCTCCTGGCGCTCCTGGCCTCCGCCC
222
223a score=21699.0
224s hg17.chr11   116211733 24 + 134452384 TCACTGGGTGTTGAGCTTCTTAGT
225s panTro1.chr9 118212083 24 + 136640551 TCACTGGGTGTTGAGCTTCTTAGT
226s mm5.chr9      77844334 24 - 124177049 TCACTGGGCAGTCAGAGTCTCGCT
227s canFam1.chr5  72346944 24 -  92064832 TCACTGCGCGTTCAGCTTCTTGGT
228
229a score=166504.0
230s hg17.chr11    116211757 354 + 134452384 GTACTCCTCGAGAGCGCTCAGG---------AAGCTGACCTTGAAGCTCTCCAGCACGGGCAGC-AGGCCTTGGCGGAGGTCCTCGAGCGCGGGCTTGGCCTTCTCGCTGAGCGTGCTCAGATGCTCGGTGGCCTTGGCGTGGTACTCGGCCAGTCTGGCGCCGCCGTTCTCCTTGAGAGCCTCAAGGCGCGCGGCCAAGCGCTGGCGCAGCTCGTCGCTGTAGGGGGCCAGATGCGTGCGCAGCGCGTCCACATGGGCGCGCGCGCGGTCGCGCATCTCCTCGCCCAGTGGGCTCAGCTTCTCTTGCAGCTCGTGCAGCTTCTGGCGCGCGCCCTCTTGGAGCTCTGCGCGCAGCGGCTCCAC
231s panTro1.chr9  118212107 354 + 136640551 GTACTCCTCGAGAGCGCTCAGG---------AAGCTGACCTTGAAGCTCTCCAGCACGGGCAGC-AGGCCCTGGCGGAGGTCCTCGAGCGCGGGCTTGGCCTTCTCGCTGAGCGTGCTCAGATGCTCGGTGGCCTTGGCGTGGTACTCGGCCAGTCTGGCGCCGCCGTTCTCCTTGAGAGCCTCAAGGCGCGCGGCCAAGCGCTGGCGCAGCTCGTCGCTGTAGGGGGCCAGATGCGTGCGCAGCGCGTCCACATGGGCGCGCGCGCGGTCGCGCATCTCCTCGCCCAGTGGGCTCAGCTTCTCTTGCAGCTCGTGCAGCTTCTGGCGCGCGCCCTCTTGGAGCTCGGCGCGCAGCGGCTCCAC
232s mm5.chr9       77844358 348 - 124177049 GGCCTTGTCGATCACACTCTGG---------ACTTGGGTCTTAAGCGTCTCCAGCATGGGCATC-AGACTATGGCGCAGGTCCTCCAGCGCAGGTCTGGCTTTCTCGCCAAGTGTCTTCAGGTGGGTTTTGGCCCTGGTGTGGTACTCGTTCAAGGTAGGGTTGC------TCTTGAGCTCAGCCAGGCGCTGGGCCAGGCTCTCGCGCATCTGTTCGCTGTGGGGCGCTAGCTGTGTGCGCAGAGAGTCTACGTGTGTGCGCATGCGGTCGCGAAATTCCTCAGCCACAGGGGACAGTCTCCCTTGCAGCTCCTGCAGCTTCTGGCGCGCGCTCTCCTGCAGCTCGGCGCCCAGAGGCGCCAC
233s canFam1.chr5   72346968 354 -  92064832 GGCCTCGTCGATGGCAGCCAGC---------AGGCTGACCTTGAAGCTCTCCAGCACGGGCAGC-AGGCCCTGGCGCAGGTCCTCGAGCGCGGGCCTGGCCTTCTCGCCGAGCGCGCTCAGCTGCTCGCTGGCCCTGGCGTGGTACTCGGCCAGGCTGGCGCCGCCGCCCTCCTTGAGCGCCTGCAGCCGCGCGGCCAGGCGCTCGCGCAGGTCGTCGCTGTAGGGGGCCAGCTGGGCGCGCAGCGCGTCCACGTGGGTGCGCGCGCGGTCCCGCAGCTCCTCGCCCAGCGGGCTCAGCTTCTCCTGCAGCTCCTGCAGCTTCTGGCGCGCGCCCTCGCGCAGCTCCGAGCCCAGCGGCGCCAC
234s galGal2.chr24   4799439 363 +   5910111 GGACTTCTGGAGTTCGTCCAGGAAGGAGATCAAGCGGTTCTTGAGGTTCT-CAGCATAGGGGGTGAGGCGCTCCCTGAATTCCTGCACCAGAGGCGTCATCTTCTCACGCAGGTTGCTGAGCTGCTCCATCACCTTGGCCTGGTACTCGGAAGCCTGGGGGATGCCCTTCTCGCGGATCTCCTCCAGCTTCTGGCTCAGCTTCTGCCGCAGCTCATCGCTGTATGGCGCCAGGTTCTTGCGCAGCTCCTCCACGTGCCCACGCAGACGATCCCGCGCCTCCTCAGCCACCGGGGTCAGCTTGGCCTGCATCAGCTCCACCTTCTGCTTGGTGAGCTCCTTCAGCTCCTGAGCCACGGGCGTCAG
235
236a score=84013.0
237s hg17.chr11    116212111 105 + 134452384 CTTCTGGCGGTAGAGCTCCATCTCCTCCTGCCACTTCTTCTGGAAGTCGTCCAGGTAGGGCTGCACCTTGGCCTTCACCTCCTCCAGATCCTTGCTCATCTCCTG
238s panTro1.chr9  118212461 105 + 136640551 CTTCTGGCGGTAGAGCTCCATCTCCTCCTGCCACTTCTTCTGGAAGTCGTCCAGGTAGGGCTGCACCTTGGCCTTCACCTCCTCCAGATCCTTGCTCATCTCCTG
239s mm5.chr9       77844706 105 - 124177049 CTTCTGGCGGTAGAGCTCCACATCCTCTTTCCATTTCTTCTGGAATTCGTCCAGGTAGGGCTGCACCTTCTGTTTCACTTCCTCTAGGTCCTTGTTCATCTCCTG
240s rn3.chr2      192507462 102 + 258222147 CTCCTCTCGGAAATGCACGATCTCATCCTGC---TTCTCCTGCAAGTCTTCCAGAAGCTGCCGCCGCTCAGCCTTCTGCTGCTCCAGCTCCTTCTCCAGCTCCTG
241s canFam1.chr5   72347322 105 -  92064832 CTTCTGGCGGTACAGCTCCACCTCCTCCTGCCACTTCTTCTGGAAGTCGTCCAGGTAGGGCTGCACCTTCTGCTTCACCTCCTCCAGGTCCTTGCTCATCTCCTG
242s galGal2.chr24   4799802 105 +   5910111 GCGCTGGCGGTACTGCTCCAGCTCCTCCGTCCACTTGGCGGAGAACTGGTCCAGGAAGGGCCGGATCTTCTCCTTCACCTCCTCCAGGTCCTTGGTCAGCTCAGC
243
244a score=57194.0
245s hg17.chr11    116212216 121 + 134452384 CCTCAGGCCCTCTGTCTCCTTTTCCAGGTTATCCCAGAACTCCTGGGTCACAGGGCCGAGCTGTTCGCGCAGCTTGCTGAAGGTGGAGGTCACGCTGTCCCAGTTGTCAAGGAGCTTTAGG
246s panTro1.chr9  118212566 121 + 136640551 CCTCAGGCCCTCTGTCTCCTTTTCCAGGTTATCCCAGAACTCCTGGGTCACAGGGCCGAGCTGTTCGCGCAGCTTGCTGAAGGTGGAGGTCACGCTGTCCCAGTTGTCAAGGAGCTTTAGG
247s mm5.chr9       77844811 121 - 124177049 TCTCACCCAATCTGTTTCTTTCTCCAGGTTATCCCAGAAGTCCCGAGTCAATGGGCCCAGCCGTTCCTGCAGCTGACTAACGGTTGAACCCAGAGTGTCCCAGTTTTCCAGGAGATTCAGG
248s canFam1.chr5   72347427 121 -  92064832 CCGCAGCACCTCCGTCTCCTTCTCCAGGTTATCCCAGAACTCCTGCGTGACCGGGCCGATCTGTTCGCGCAGCTTGGTCACCGTGCTGCTCAGGCTGTCCCAGTTGTCCAGGAGTTTCAGG
249s galGal2.chr24   4799907 121 +   5910111 ACGCAGAGCCTCGGTGTCCTTCAGCCACATCTCGCGCACCTCCTTGTAGTAGGGAGCCATGTCCTCACGCAGCTTGGCAGCCGCGGCACTCAGCGTGTCCAGGTTGTCAGCCAGCTTCAGG
250
251a score=4872.0
252s hg17.chr11      1812377 30 + 134452384 ATGCTCCACCTGCATGGCTG--------------GCAAACCATG
253s panTro1.chr9    2001217 30 + 136640551 ATGCTCCACCTGTATGGCTG--------------GCAAACCACG
254s mm5.chr7      130142453 26 + 133051633 -----CCAACTGGACTACCGT-------------GTAGAAGATG
255s rn3.chr1      202843225 26 + 268121971 -----CCAACTAGACTGCCTT-------------GTAGAAGATG
256s canFam1.chr18  56425269 44 +  66173745 AGGCTCCACCTGTGTGACTCCACCCGTGTGACCGACAAACCATG
257s danRer1.chrNA 165962846 24 - 390413307 -----AGTTCAGGAAGTCCA--------------GGAAGAGA-G
258
259a score=333744.0
260s hg17.chr12     38440094 227 + 132449811 TTATTCCACATCAGAAGCATCATTGTCAGAAAGATGATAGTTACTTCCCTTTACCCGAATATATTCAATATATCTCCCTTCATCAGAATCTG---AAGTGCCACATGTACATAGCCTGTTGTCAAAGAGTGATTCAATTTCCTCTAATTTTTTGCCTTTGGTCTCAGGAAGACAGCCATAGATGAAAAGGAGTCCCACAGCAGCAAATCCAGCATAGAGGAAGAAAGCTC
261s panTro1.chr10  39016533 227 + 135301796 TTATTCCACATCAGAAGCATCATTGTCAGAAAGATGATAGTTACTTCCCTTTACCCGAATATATTCAATATATCTCCCTTCATCAGAATCTG---AAGTGCCACATGTACATAGCCTGTTGTCAAAGAGTGATTCAATTTCCTCTAATTTTTTGCCTTTGGTCTCAGGAAGACAGCCGTAGACGAAAAGGAGTCCCACAGCAGCAAATCCAGCATAGAGGAAGAAAGCTC
262s mm5.chr15      91666098 227 + 104138553 TTACTCCACGTCAGAAGCGTCGTTGTCGGAGAGATGATAGTTGCTTCCCTTCACGCGGATGTACTCAATGTACCTCCCTTCATCCGAGTCGG---CAGCGCCACATGAACATAGCCGGTGGTCAAAGAGCGATTCGATTTCCTCCAATTTTTTCCCCTTGGTTTCAGGGAGGCAGCCATAGACAAAAAGCAGTCCCACAGCGGCGAATCCGGCGTAGAGGAAGAATGCTC
263s rn3.chr7      129719269 227 + 143082968 TCACTCCACGTCCGAGGCGTCGTTGTCGGAGAGATGGTAGTTACTTCCCTTCACGCGGATGTACTCGATGTACCTGCCCTCGTCCGAGTCCG---CGGTGCCGCAGGTGCACAGCCGGTGGTCGAAGAGCGATTCGATTTCCTCTAGTTTTTTCCCTTTGGTTTCAGGAAGACAGCCATAGACGAAAAGCAGTCCCACAGCGGCGAATCCGGCGTAGAGGAAGAACGCTC
264s canFam1.chr27  32235556 227 -  49087461 TTATTCCACATCAGAAGCATCGTTGTCAGAAAGATGATAGTTACTTCCCTTCACCCGAATATATTCAATATATCGCCCTTCATCAGAATCTG---AAGCACCACATGTACATAACCTGTTGTCAAAGAGTGATTCAATTTCCTCTAATTTTTTCCCTTTGGTCTCAGGAAGACAGCCATAGATGAAAAGGAGTCCCACACCAGCGAATCCAGCATACAGGAAGAAGGCTC
265s galGal2.chr1  179729132 227 - 188239860 TTATTCCACATCAGAAGCATCATTGTCAGAAAGATGGTAATTACTTCCCTTCACCCGAATATATTCAATATACCTCCCTTCATCAGAATCTG---ACATACCACATGTACATAGCCTGCTTTCAAACAAAGATTCAATTTCCTCTAGTTTTTTCCCTTTAGTCTCAGGAAGGCAGCCATAGATGAAAAGGAGTCCCAGGCCAGCAAACCCTGCGTACAGAAAGAAGGCTC
266s fr1.chrUn     213944794 227 + 349519338 CTAGTCCACATCAGAGGCGTCGCTCTCAGACAGGCGGTAGTTGCTGCCCTTTACCCGGATGTACTGCACGTTCCGGCGGTCGTTGCGGGAGG---AGGCTCCGCAGGAGCAGAGCGGACCGGAGAACAGGCTCTCGATGTCCTCCAGCTGCAGGCCCTGGGTCTCCGGGAGGCAGCCCAGGATGAAGAAGAGGCCCAGCACCACCAGGCCAGCGTACATGAAGAACGCCC
267s danRer1.chrUn  27538197 206 + 367113659 TCACTCCTCCTCATCCTCGTCTTCATCAGAG---CGGGAGTTTCCTCCGTTTACCCGCATGTACT---------------------GATCTGTGTGGGCTCCGCAGCTGCAGAGTCGCCTGCTGAACAGAGACTCGATCTCCTCCAAGCGCAAACCCTTGGTCTCCGGCAGACACCCCGACACGAACACGAAGCCCAGCAGAGCCAGAGCAGCGTACAGGAAAAACGCTC
268
269a score=115495.0
270s hg17.chr13    112381694 259 + 114142980 ATGAACTCACCAGAGGCGAGGCTCTGCGTTGCTCAATGCAGAGACTCTTACCCAGGGTGTCAGCCTCTGAAAGATACACGTGCCTGGGCCTCTTCCCTGAAGATGGACCCGGCAGGTCTGGAGGGAGG-CCCCCGTGATGAATCCCG-TGATGAGCCGCCGATCCGAGCTCAGGCTGCGTCATGGGACCAGCCACAAGGTTGCCTGACC-TATAAAGGTCGCAGGAGTGCCTCAGGGACACAGAAGCAGTTACAGCTGCCAG
271s panTro1.chr14  95994697 259 +  97804244 ATGAACTCACCAGAGGCGAGGCTCTGCGTTGCTCAATGCAGAGACTCTTACCCAGGGTGTCAGCCTCTGAAAGATACACGTGCCTGGGCCTCTTCCCTGAAGATGGACCCGGCAGGTCTGGAGGGAGG-CCCCTGTGATGAATCCCG-TGATGAGCCGCTGATCCGAGCTCGGGCTGCGTCATGGGACCAGCCACAAGGTTGCCTGACC-TATAAAGGTCACAGGAGTGCCTCAGGGAGACAGAAGCAGTTACAGCTGTCAG
272s mm5.chr8       12764663 188 + 128688707 ATTTGTTCACCAGAG----TGTCCTGGCCTCCTGCCTATGTGGACTCATTCCCAAGG-ACCAGCCT-TGAAGGACGCA---ATGTAGGGCTCC---------ATGGA------------GGAGGGAGG-TCTGTGTGACA-----------------------------------------CTGGGACTTGCCACAGGTCAG--TGATTGTTCAGAGGTCACAGGAGTGCCACCCTCAGGCAGAGTCATCTGTCTTTTCCAG
273s rn3.chr16       8607378 190 -  90224819 ATCCATTTACCAGAG----CGACCTGGCCTCCTGCCTAGGGGGGCTCATTCCCAAGG-ACCGGTCT-TGAAGGGTGTA---TTATATGGTTTC---------ATGAA-----------GGGAGGGAGG-TCTGTGTGACC----------CTGGGACACCGCT------------------------------ACAGGTCAG--TGATTGTTCGGAAGTCACAGGAATGCCACCCTCAGGAAGAGTTATCTATCTTTTCCAG
274s canFam1.chr22  63116876 177 +  64236280 A------------------TGTGCTGGTCTGCTCAGGGCAGGAGCTCTTCGCCGGAT-GTCAGTCC-CGA--GACGCACATGCCTGGGCTTCT-------------CCCTCACAGGACTGCAGCAAGGACCACCACGGTGGACACTGAGGAGGCCCCGCCAGGCCGA----------------GGGATGGAGGAGAGGCCAT--CGATG------GAGCAGCATGGGGTCGTCAT--------------------------G
275
276a score=694393.0
277s hg17.chr14     98710240 325 + 106368585 TTAGCTCCTCTCGGCCTGCTCGATTTTGACGTCGTTAGTCAGCAAGTGCTCGCCGTGCCACTTTTTCATGTGTTTCTCCAGGGTGCTGTAGACGCTGAAGGGCATCTGGCAGATGTCGCAGCGGTACACCTCCTTGCCGATCTGCCCGTGCGTCTTCATGTGGCGCGTGAGCTTGCTGCTCTGCGCGCACGCGTAGTTGCACAGCTCGCACTTGTAAGGCCGCTCGCCGGTGTGGCTCCGCCGGTGCACCGTCAAGTTGCTGCAGTTCTTGAACACCTTGCCGCAGTACTCGCACGTGTCGCTGCGGCGGCCCTCCTTGGAGCTg
278s panTro1.chr15  99208107 324 + 106954593 TTAGCTCCTCTCGGCCTGCTCGATTTTGACGTCGTTAGTCAGCAAGTGCTCGCCGTGCCACTTTTTCATGTGTTTCTCCAGGGTGCTGTAGACGCTGAAGGGCATCTGGCAGATGTCGCAGCGGTACACCTCCTTGCCGATCTGCCCGTGCGTCTTCATGTGGCGCGTGAGCTTGCTGCTCTGCGCGCACGCGTAGTTGCACAGCTCGCACTTGTA-GGCCGCTCGCCGGTGTGGCTCCGCCGGTGCACCGTCAAGTTGCTGCAGTTCTTGAACACCTTGCCGCAGTACTCGCACGTGTCGCTGCGGCGGCCCTCCTTGGAGCTg
279s mm5.chr12     102664235 325 + 115071072 TTAGCTCCTCTCAGCCTGCTCGATTTTGACATCATTAGTCAGCAAGTGTTCACCGTGCCACTTTTTCATGTGTTTCTCCAGGGTGCTGTAGACGCTGAAGGGCATCTGGCAGATGTCGCAGCGGTACACCTCCTTGCCGATCTGCCCGTGCGTCTTCATGTGGCGCGTGAGCTTGCTGCTCTGCGCGCACGCGTAGTTGCACAGCTCGCACTTGTAAGGCCGCTCGCCGGTGTGGCTCCTCCGGTGCACCGTCAGGTTGCTACAGTTCTTGAAGACCTTGCCGCAGTACTCACATGTGTCGCTGCGGCGGCCCTCCTTGGAGCTC
280s rn3.chr6      132299612 325 + 147642806 TTAGCTCCTCTCAGCCTGCTCGATTTTGACATCATTAGTCAGCAAGTGTTCACCGTGCCACTTTTTCATGTGTTTCTCCAGGGTACTGTAGACACTGAAGGGCATCTGGCAGATATCGCAGCGGTACACCTCCTTGCCGATCTGACCGTGCGTCTTCATGTGGCGCGTAAGCTTGCTGCTCTGCGCGCACGCGTAGTTGCACAGCTCGCACTTGTAAGGCCGCTCGCCGGTGTGGCTCCTCCGGTGCACCGTCAGGTTGCTACAGTTTTTGAAGACCTTGCCGCAGTACTCGCACGTGTCGCTGCGGCGGCCCTCCTTGGAGCTC
281s canFam1.chr8   70559093 325 +  77374719 TTAGCTCCTCTCGGCCTGCTCGATTTTGACGTCGTTAGTCAGCAAGTGCTCGCCGTGCCACTTTTTCATGTGTTTCTCCAGGGTGCTGTAGACGCTGAAGGGCATCTGGCAGATGTCGCAGCGGTACACCTCCTTGCCGATCTGCCCGTGCGTCTTCATGTGGCGCGTGAGCTTGCTGCTCTGCGCGCACGCGTAGTTGCACAGCTCGCACTTGTAAGGCCGCTCGCCGGTGTGGCTCCGCCGGTGCACCGTCAGGTTGCTGCAGTTCTTGAACACCTTGCCGCAGTACTCGCACGTGTCGCTGCGCCGGCCCTCCTTGGAGCTc
282s galGal2.chr5   44593849 325 +  56310377 TTAGCTTCTTTCTGCCTGCTCAATTTTGACGTCATTTGTCAGCAAATGTTCTCCATGCCACTTTTTCATGTGTTTCTCCAGGGTGCTGTAAACACTGAAGGGCATCTGGCAAATGTCGCAGCGGTAGACCTCCTTCCCTATCTGGCCATGCGTTTTCATGTGACGCGTCAGCTTACTGCTCTGGGCACATGCATAGTTGCAGAGCTCGCATTTGTAAGGCCGCTCTCCAGTGTGGCTCCGACGGTGCACCGTCAAATTGCTGCAGTTCTTAAAGACCTTGCCACAGTACTCACATGTATCGCTCCTGCGCCCTTCCTTCGAGCTG
283s fr1.chrUn     275909939 325 + 349519338 TTACACCGTCTCTGCTTGTTCCAGTTTGATGTCATTGGTCATCAAATGTTCTCCATGCCACTTTTTCATGTGTTTCTCCAGAGTGCTGTACACACTGAAAGGCATTTGGCAAATGTCACAACGAAAGACCTCCTTACCAAGCTGGCCATGCGTCTTCATGTGGCGCGTTAGCTTTGAGCTCTGGGCACACGCGTAGTTGCACAGCTCACACTTGTAGGGCCTCTCACCCGTGTGACTGCGTCGGTGCACTGTCAGGTTGCTGCAGTTTTTAAAAACTTTGCCACAGAACTCACAGGTGTCAGACCGCCGGCTGTCCTTTGAGCTG
284s danRer1.chrUn 103629515 325 + 367113659 TTAGCTTCTCTCTGCTTGTTCAATTTTGACCTCATTCGTCATCAAATGTTCCCCATGCCACTTTTTCATGTGTTTCTCAAGCGTGCTGTAGACGCTGAAGGGCATTTGGCAAATGTCACAGCGGTACACTTCCTTACCGAGCTGGCCGTGTGTCTTCATGTGGCGGGTGAGCTTGCTGCTCTGGGCGCAGGCGTAGTTACAAAGCTCACACTTGTAGGGCCTCTCGCCTGTGTGGCTGCGTCTGTGCACTGTCAGATTGCTACAGTTCTTGAACACCTTCCCACAGTACTCACAGGTGTCACTCCTCCGGCTCTCTTTCGAGCTA
285
286a score=20235.0
287s hg17.chr14     98710565 24 + 106368585 ggccgcccggggcccgggccgccc
288s panTro1.chr15  99208431 24 + 106954593 ggccgcccggggcccgggccgccc
289s mm5.chr12     102664560 24 + 115071072 GGCCTCCCAGGACCCGGACCACCC
290s rn3.chr6      132299937 24 + 147642806 GGCCGCCCAGGACCCGGGCCACCC
291s canFam1.chr8   70559418 24 +  77374719 ggccgcccggggcccgggccgccc
292
293a score=4011.0
294s hg17.chr14     98710589 2 + 106368585 AG
295s panTro1.chr15  99208455 2 + 106954593 AG
296s mm5.chr12     102664584 2 + 115071072 AG
297s rn3.chr6      132299961 2 + 147642806 AG
298s canFam1.chr8   70559442 2 +  77374719 AG
299s fr1.chrUn     275910285 2 + 349519338 AG
300s danRer1.chrUn 103629867 2 + 367113659 AG
301
302a score=517186.0
303s hg17.chr14     98710591 277 + 106368585 GTGCGGGGTGCTGCCTCCGCTGGCCGTGCCGCTGCGGCCCGAGAGGCCGCCGTCCAGCAGGTCCCCGGGCGGCGTGGAGAAGCGCAGGCTGCCGTTCTCGGACGAGTGCTCGGACGACGTGGCGAAGGGCGACTGTCGTGCGTCCGTGAAGCCCAGGAAGGGGTCCTTCATGAAGTGCCGCGACGCCGCGTAGCCCACCAGCCACTGCGAGTACACGTTCTCGGACGGGATGAGCGCGGCGGGCGGCAGCTCCAGGTCCTTCTCCACCTTGATGCGC
304s panTro1.chr15  99208457 277 + 106954593 GTGCGGGGTGCTGCCCCCGCTGGCCGTGCCGCTGCGGCCCGAGAGGCCGCCGTCCAGCAGGTCCCCGGGCGGCGTGGAGAAGCGCAGGCTGCCGTTCTCGGACGAGTGCTCGGACGACGTGGCGAAGGGCGACTGTCGTGCGTCCGTGAAGCCCAGGAAGGGGTCCTTCATGAAGTGCCGCGACGCCGCGTAGCCCACCAGCCACTGCGAGTACACGTTCTCGGACGGGATGAGCGCGGCGGGCGGCAGCTCCAGGTCCTTCTCCACCTTGATGCGC
305s mm5.chr12     102664586 277 + 115071072 GTGAGGTGTGCTGCCCCCGCTCGCCGTGCCACTGCGCCCGGACAGCCCGCCGTCCAGCAGGTCCCCGGGTGGCGTTGAGAAGCGCAGGCTGCCGTTCTCAGAGGAATGTTCCGACGATGTGGCGAAAGGCGACTGGCGCGCATCCGTGAAGCCCAGGAATGGGTCCTTCATGAAGTGGCGCGATGCTGCGTAGCCCACGAGCCACTGCGAGTACACGTTCTCAGATGGGATGAGGGCGGCAGGTGGCAGCTCCAGGTCTTTCTCCACCTTGATGCGC
306s rn3.chr6      132299963 277 + 147642806 GTGAGGCGTGCTGCCCCCGCTCGCCGTGCCACTGCGCCCCGACAGCCCGCCGTCCAGCAGGTCCCCGGGTGGCGTGGAGAAGCGCAGGCTGCCGTTCTCAGAGGAATGTTCCGACGACGTGGCGAAAGGCGACTGGCGCGCATCCGTGAAGCCCAGGAACGGGTCCTTCATGAAGTGGCGCGACGCCGCGTAGCCCACGAGCCACTGCGAGTACACGTTCTCGGATGGGATGAGGGCGGCGGGTGGCAGCTCCAGGTCCTTCTCCACCTTGATGCGC
307s canFam1.chr8   70559444 277 +  77374719 GTGCGGCGTGCTGCCCCCGCTGGCCGTGCCGCTGCGGCCCGACAGCCCGCCGTCCAGCAGGTCCCCGGGCGGCGTGGAGAAGCGCAGGCTGCCGTTCTCGGACGAGTGCTCGGACGACGTGGCGAAGGGCGACTGGCGCGCGTCCGTGAAGCCCAGGAACGGGTCCTTCATGAAGTGCCGCGACGCGGCGTAGCCCACGAGCCACTGCGAGTACACGTTCTCGGACGGGATGAGCGCGGCGGGCGGCAGCTCCAGGTCCTTCTCCACCTTGATGCGC
308s galGal2.chr5   44594200 277 +  56310377 GTGGGGGGTGCTGCCTCCGGAGGCCGTGCCGCTGCGCCCTGAGAGCCCCCCATCCAGCATGTCCCCCGGCGGGGTGGAGAAACGCAGGCTCCCATTCTCCGACGAATGCTCGGAAGAGGTGGCGAAGGGAGATTGTCGGGAGTCTGTGAATCCTAGAAACGGATCCTTCATGAAGTGCCTTGATGCCGCGTACCCTACCAGCCACTGGGAGTAAACATTTTCGGAAGGTATTATTGTTGCTGGTGGCAAGTCCAAATCTTTCTCAACTTTTATTCGT
309s fr1.chrUn     275910287 277 + 349519338 GTGAGGCGTGCTGCCTCCACTTGCGGTCCCACTACGGCCCGACAAGCCACCGTCCATCAGGTCTCCTGGGGGCGTGGAGAAGCGCAGGCTTCCATTTTCAGAGGAGTGCTCCGATGAAGTGCCGAAGGGAGATTGTCTCGAGTCACTGAAGCCTAGAAAAGGGTCTTTTATGAAATGGCGAGAGGCAGCATAGCCCACTAACCACTGGGAGTAGACATTTTCAGAGGGTATGAGGGGTGCCGGGGAACCATCCCCGTCCTTCTCTGTCTTTATCCTC
310s danRer1.chrUn 103629869 277 + 367113659 GTGCGGGGTGCTGCCTCCGCTAGCAGTACCACTGCGGCCGGAGAGGCCCCCGTCCAGCAGGTCCCCTGGCGGCGTAGAGAATCGCAAGCTTCCGTTCTCGGAGGAGTGTTCCGAGGAGGTGGCGAATGGAGATTGTCTGGAGTCGGTGAAGCCAAGGAAAGGATCTTTGATGAAGTGGCGGGATGCTGCATAGCCCACCAGCCACTGGGAGTAGACATTTTCAGATGGGATTAGGGGGGCTGGGGGTATGTCCAAATCCTTTTCAATTTTGATCCTC
311
312a score=56079.0
313s hg17.chr14     98710868  71 + 106368585 TTG------------GCGGCG---CTGTTGAGCCCGGGGCTGGGCAGCGGCGCGGGCTTGCGCGGGAAGAGCCCGGGGAAGGG---------------------------------------CTC
314s panTro1.chr15  99208734  71 + 106954593 TTG------------GCGGAG---CTGTTGAGCCCGGGGCTGGGCAGCGGCGCGGGCTTGCGCGGGAAGAGCCCGGGGAAGGG---------------------------------------CTC
315s mm5.chr12     102664863  83 + 115071072 TTGGCCGCGTGCAGCGCGGGA---CCACCGAGCCCAGGGCTGGGCAGCGGTGCTGGCTTGCGTGGGAAGAGAGCTGGAAAGGG---------------------------------------CTC
316s rn3.chr6      132300240  83 + 147642806 TTGGCCGCGTGTAGCGCAGGA---CCACCAAGCCCCGGGCTGGGCAGCGGTGCGGGCTTGCGTGGGAAGAGCGCTGGGAAGGG---------------------------------------CTC
317s canFam1.chr8   70559721  71 +  77374719 TTG------------GCCGCG---CTGTTGAGCCCGGGGCTGGGCAGCGGCGCCGGCTTGCGCGGGAACAGCCCCGGGAAGGG---------------------------------------CTC
318s galGal2.chr5   44594477 110 +  56310377 TTA------------GATGAG---TTATTTAAGCTGGGGCTTGTGATAGGTGTTGGCTTCCGAGGGAACAAGTTTGGGAAGGGCTCGCCTGGGCCAAAGTTTCTTCCATTGACTGTCCCCTCCTC
319s fr1.chrUn     275910564  85 + 349519338 TTACTC---------ATGGAG---TTAGCCAGGCCAGAACCAGCGACGGAAGCGGGTTTGTAGGGAAATAAGCTTGGAAGAGA----------------------------ATCATCCGATCCGC
320s danRer1.chr5    4282954  74 +  40038624 TTG------------GCGGAAGATCCAGAGAGGCTGGAGCTGGAAATGGGCATTGGCTTACGATGGAACATCGCAGAGATGGA---------------------------------------ATC
321
322a score=4995.0
323s hg17.chr14     98710939 5 + 106368585 GGTGC
324s panTro1.chr15  99208805 5 + 106954593 GGTGC
325s mm5.chr12     102664946 5 + 115071072 TGCGC
326s rn3.chr6      132300323 5 + 147642806 TGCGC
327s canFam1.chr8   70559792 5 +  77374719 GGCGC
328s galGal2.chr5   44594587 5 +  56310377 GGTGC
329s fr1.chrUn     275910649 5 + 349519338 TGTTC
330
331a score=9825.0
332s hg17.chr14     98710944 10 + 106368585 CTGGCGCGAA
333s panTro1.chr15  99208810 10 + 106954593 CTGGCGCGAA
334s mm5.chr12     102664951 10 + 115071072 CTGGCGCGAA
335s rn3.chr6      132300328 10 + 147642806 CTGGCGCGAA
336s canFam1.chr8   70559797 10 +  77374719 CCGGTGCGAA
337s fr1.chrUn     275910654 10 + 349519338 CTGCCATTAA
338
339a score=42070.0
340s hg17.chr14     98710954 72 + 106368585 Gccgcccccgcgcccgttgaccgcgccgcccgcgcccgcgtccccgcagccgcccgcgtcgtcgtcgtcgcc
341s panTro1.chr15  99208820 72 + 106954593 Gccgcccccgcgcccgttgaccgcgccgcccgcgcccgcgtccccgcagccgcccgcgtcgtcgtcgtcgcc
342s mm5.chr12     102664961 69 + 115071072 GGCCCCGCCGCGCCCGTTCACTGCACCCGGTGCACCCGCGTCCCCACAGCCAACAG---CTCCGGCATCACC
343s rn3.chr6      132300338 69 + 147642806 GGCCCCGCCACGCCCGTTCACTGCGCCCGGTGCACCTGCATCCCCGCAGCCACCAG---CTCCGGTGTCACC
344s canFam1.chr8   70559807 72 +  77374719 gccgccgccgcgcctgttgaccgcgccgccggtgcccgcgtccccgcagccgcccgcgtcgtcgtcgtcgcc
345
346a score=1846.0
347s hg17.chr14     98711026 19 + 106368585 cgcgtccccgccgcccgcc
348s panTro1.chr15  99208892 19 + 106954593 cgcgtccccgccgcccgcc
349s mm5.chr12     102665030 10 + 115071072 CGTGTCGC---------CT
350s rn3.chr6      132300407 10 + 147642806 CGCGTCGC---------CT
351s canFam1.chr10  63975552 18 +  72717409 AGTGTCCCTGTGGGCC-TC
352
353a score=1381.0
354s hg17.chr14     98711045 5 + 106368585 GCACG
355s panTro1.chr15  99208911 5 + 106954593 GCACG
356s mm5.chr12     102665040 5 + 115071072 GCACG
357s rn3.chr6      132300417 5 + 147642806 GCACG
358s canFam1.chr10  63975570 2 +  72717409 G---G
359s fr1.chrUn      86333360 5 + 349519338 GGATA
360
361a score=13475.0
362s hg17.chr14     98711050 19 + 106368585 CTTCAGGAAGGC-GCCGCGC
363s panTro1.chr15  99208916 19 + 106954593 CTTCAGGAAGGC-GCCGCGC
364s mm5.chr12     102665045 19 + 115071072 CTTCAGGAAGGC-GCCCCGC
365s rn3.chr6      132300422 19 + 147642806 CTTCAGGAAGGC-GCCTCGC
366s canFam1.chr10  63975572 20 +  72717409 CCTCGGCCAGGTGGCCGCGC
367s galGal2.chr5   44594680 19 +  56310377 TTTCATGAAGCT-ACTCCTC
368s fr1.chrUn      86333368 19 + 349519338 CCCGGTGAAGTC-GTGCTGC
369
370a score=43602.0
371s hg17.chr14     98711069 105 + 106368585 TTCTGCTTGTCGGCCAGGA---------------------GCTCGCCGTAC-TGCGGCAGTGCGCCTAGGCCCACGTTCTCCATGACCTTGCCCAGCACCAGCGCCTTCTCGTCAGCCAGCGCCTTg-
372s panTro1.chr15  99208935 105 + 106954593 TTCTGCTTGTCGGCCAGGA---------------------GCTCGCCGTAC-TGCGGCAGTGCGCCTAGGCCCACGTTCTCCATGACCTTGCCCAGCACCAGCGCCTTCTCGTCAGCCAGCGCCTTg-
373s mm5.chr12     102665064  87 + 115071072 TT---------------------------------------CTCCCCATAC-TGCGGCAGTGCGCCCAGCCCTGCGTCCTCCATCACCTTGCCCAGGGCCAGAGCCTTCTCATCCGCCAGAGCCGCA-
374s rn3.chr6      132300441  87 + 147642806 TT---------------------------------------CTCCCCATAC-TGCGGCAGTGCGCCCAGCCCTGCGTCCTCCATCACCTTGCCCAATGCCAGCGCCTTCTCATCTGCCAGAGCCGCA-
375s canFam1.chr10  63975592  92 +  72717409 TTATGCTTCTCGCCCAGGA---------CCTGGTGGAAGGCCTCGCTGAAG-TGCTGCATGGAGCTGAGCACCATGCCCTGCATGACCTCGGGCAGCG-------------------------CGCG-
376s galGal2.chr5   44594699 105 +  56310377 TTCTGTTTCTCAGCTAGCA---------------------TGTCATTGTAT-TGCTGGATGGCACCGAGACTTACATTCTCTATCACTTTTCCCAGGACAAGGGATTTCTCATCTGGCAGTGATTTG-
377s fr1.chrUn      86333387 120 + 349519338 TTCTCGTAGTGCTCCCGCAGACGTCTCAGCAGCGTGAAGGTCTTGTCGCACATGGTGCACTGCA--TGGGCCGGTG-----CATGAGCTTGTGCCGCTCGAACGCCGGCTCGTTGGCGAGGATCTTC-
378s danRer1.chrUn 103630787 106 + 367113659 TTCCGATTGTCAACTATTA---------------------AGTTATTGTAC-TGCTGGATGGAGCTGAGCCCTACATTTTCCACCATCTTTCCTAACGAAAGGGTCTTCTCATCTGAAGGAGGCTTTG
379
380a score=10567.0
381s hg17.chr14     98711174 32 + 106368585 gccgcgccgccccccgcgcccgggaccccggg
382s panTro1.chr15  99209040 32 + 106954593 gccgcgccgccccccgcgcccgggaccccggg
383s mm5.chr12     102665151 29 + 115071072 GCTG---CAGCCCCTGCGCCCGCCACCCCCGG
384s rn3.chr6      132300528 29 + 147642806 GCTG---CAGCCCCCGCGCCCGCCACCCCTGG
385s canFam1.chr10  63975684 26 +  72717409 GCCC--TCGTCGCCCACGCCCACCACCG----
386
387a score=4398.0
388s hg17.chr14     98711206 12 + 106368585 cACCCCAC---CACC
389s panTro1.chr15  99209072 12 + 106954593 cACCCCAC---CACC
390s mm5.chr12     102665180 12 + 115071072 TGGCACGC---CACC
391s rn3.chr6      132300557 12 + 147642806 TGGCACAC---CACC
392s canFam1.chr8   70560183 15 +  77374719 CACCCCGCCCACGCC
393
394a score=-114.0
395s hg17.chr14  98711217 1 + 106368585 C
396s fr1.chrUn  275910877 1 + 349519338 A
397
398a score=135397.0
399s hg17.chr14     98711218 72 + 106368585 GCCGTTCTCGCGGTTGCGGCTCAGCTCCGAGTCCATGCTGAAGCTCGACTCGGGCCGGCTCTCGTTCTCCAG
400s panTro1.chr15  99209084 72 + 106954593 GCCGTTCTCGCGGTTGCGGCTCAGCTCCGAGTCCATGCTGAAGCTCGACTCGGGCCGGCTCTCGTTCTCCAG
401s mm5.chr12     102665192 72 + 115071072 TCCGTTCTCGCGGCCACGGCCCAGCTCCGAGTCCATGCTGAAGCTCGACTCAGGCCGGCTCTCGTTCTCCAG
402s rn3.chr6      132300569 72 + 147642806 CCCATTCTCGCGGCCACGGCCCAGCTCCGAGTCCATGCTGAAGCTCGACTCAGGTCGGCTTTCATTCTCCAG
403s canFam1.chr8   70560198 72 +  77374719 GCCGTTCTCGCGGTTGCGGCTCAGCTCCGAGTCCATGCTGAAGCTCGACTCGGGCCGGCTCTCGTTCTCCAG
404s galGal2.chr5   44594806 72 +  56310377 GCCGTTTTCTCGGTTACGACTCAGCTCTGAGTCCATACTAAAGCTTGACTCTGGCCTGCTCTCATTTTCCAA
405s fr1.chrUn     275910878 72 + 349519338 GCCGTTCTCCCTGTTCCGGTATAATTCGGACTCCATGCTAAAGTTTGATTCTGGTCGACTCTCACTCTCTAG
406s danRer1.chrUn 103630894 72 + 367113659 GCCATTTTCCCTATTCCGACAGAACTCAGAGTCCATGCTGAAGTTTGACTCAGGCCTGCTTTCATTTTCCAA
407
408a score=501.0
409s hg17.chr14     98711290 1 + 106368585 T
410s panTro1.chr15  99209156 1 + 106954593 T
411s mm5.chr12     102665264 1 + 115071072 C
412s rn3.chr6      132300641 1 + 147642806 C
413s canFam1.chr8   70560270 1 +  77374719 C
414s galGal2.chr5   44594878 1 +  56310377 C
415s fr1.chrUn     275910950 1 + 349519338 t
416
417a score=295.0
418s hg17.chr14     98711291 1 + 106368585 A
419s panTro1.chr15  99209157 1 + 106954593 A
420s mm5.chr12     102665265 1 + 115071072 A
421s rn3.chr6      132300642 1 + 147642806 A
422s canFam1.chr8   70560271 1 +  77374719 A
423s galGal2.chr5   44594879 1 +  56310377 t
424
425a score=33922.0
426s hg17.chr14     98711292 47 + 106368585 GCAGctcctcctcctcctcctcctcctcctcgtcctcctcctccGGC
427s panTro1.chr15  99209158 47 + 106954593 GCAGctcctcctcctcctcctcctcctcctcgtcctcctcctccGGC
428s mm5.chr12     102665266 44 + 115071072 GCAGCTCCTCTTCTTCCTCCTCCTCGTCCTCG---TCGTCCTCAGGC
429s rn3.chr6      132300643 44 + 147642806 GCAGCTCTTCTTCTTCCTCCTCCTCGTCCTCG---TCGTCCTCAGGC
430s canFam1.chr8   70560272 47 +  77374719 GCAGctcctcctcctcctcctcctcctcctcgtcgtcctcctcGGGC
431
432a score=21186.0
433s hg17.chr14     98711339 20 + 106368585 TCGTGGCCCAGCGACGGGTC
434s panTro1.chr15  99209205 20 + 106954593 TCGTGGCCCAGCGACGGGTC
435s mm5.chr12     102665310 20 + 115071072 TCGGGGCCCAGAGATGGGTC
436s rn3.chr6      132300687 20 + 147642806 TCGGGTCCCAGAGATGGGTC
437s canFam1.chr8   70560319 20 +  77374719 TCGTGGCCCAGCGACGGGTC
438s galGal2.chr5   44594918 20 +  56310377 TCATGGCCCAGGGAGGGATC
439
440a score=13223.0
441s hg17.chr14     98711359 13 + 106368585 GCTCTCGTGGTGG
442s panTro1.chr15  99209225 13 + 106954593 GCTCTCGTGGTGG
443s mm5.chr12     102665330 13 + 115071072 GCTCTCATGGTGG
444s rn3.chr6      132300707 13 + 147642806 GCTCTCATGGTGG
445s canFam1.chr8   70560339 13 +  77374719 GCTCTCGTGGTGG
446s galGal2.chr5   44594938 10 +  56310377 GCTCTCA---TTC
447s danRer1.chrUn 103631014 13 + 367113659 GCCCTCGCCTTTG
448
449a score=0.0
450s hg17.chr14 98711372 3 + 106368585 CGG
451
452a score=4230.0
453s hg17.chr14     98711372 3 + 106368585 CGG
454s panTro1.chr15  99209238 3 + 106954593 CGG
455s mm5.chr12     102665343 3 + 115071072 CGG
456s rn3.chr6      132300720 3 + 147642806 CGG
457s canFam1.chr8   70560352 3 +  77374719 CGG
458s galGal2.chr5   44594948 3 +  56310377 CTG
459s fr1.chrUn     275910990 3 + 349519338 TGG
460
461a score=1089095.0
462s hg17.chr14     98711375 631 + 106368585 AAGTCACCGTCGGCCGCCTTGAGGCCCTCGCCCGCCAGCTCGCTGGTGCCGGGCTCGGGGGAGCTGGCGGCCGAGAGCCCGTCGTCGGAGCGGCCGGCCAGCGAGCCGGCCTTGTGCATGTGCGTCTTCATGTGGCGCTTGAGCTTGCTGGCCTGCGAGCACGCGTGGTCGCACAGCTGGCACTTGTAGGGCTTCTCGCCCGTGTGACTGCGCCGGTGCACGATGAGATTGCTCTGGAACTTGAAGGTCTTGCCGCAGAACTCGCACGACTTGCTCTTGGCTGGCGGCTGCGGGGGCGGCGTGCCGCCAGGGGGCATGGGCGGCAGCGGCGGCGTGCTCAGGAACGGGGACTTGGGGCTGGGCTGGAA------GGGGTTCAGGAGCCGGTGCATAGGGTTGCCGCGGCCCGGGGACACGGGCGGCGGCG---TGGAGCTGTTGCCCGCCAGCTCGCGGAGCCGCCGCGAGAAGTCCATGGCGGGCGAGTCGATGGCCATGGGGTTCAGGCGCATGACTCGGTCGAAGGCACTGGGGTGCTGGGCGACGAGCCCCATCTCCTCGGCACTGAGGCG---------GTGCGGGTCCAGGTGGTGGCGCGGCGGGGGACTGAAGAGAGGCGGCGTGCCCGGCAGGCGGCCCT
463s panTro1.chr15  99209241 631 + 106954593 AAGTCGCCGTCGGCCGCCTTGAGGCCCTCGCCCGCCAGCTCGCTGGTGCCGGGCTCGGGGGAGCTGGCGGCCGAGAGCCCGTCGTCGGAGCGGCCGGCCAGCGAGCCGGCCTTGTGCATGTGCGTCTTCATGTGGCGCTTGAGCTTGCTGGCCTGCGAGCACGCGTGGTCGCACAGCTGGCACTTGTAGGGCTTCTCGCCCGTGTGACTGCGCCGGTGCACGATGAGATTGCTCTGGAACTTGAAGGTCTTGCCGCAGAACTCGCACGACTTGCTCTTGGCCGGCGGCTGCGGGGGCGGCGTGCCGCCAGGGGGCATGGGCGGCAGCGGCGGCGTGCTCAGGAACGGGGACTTGGGGCTGGGCTGGAA------GGGGTTCAGGAGCCGGTGCATAGGGTTGCCGCGGCCCGGGGACACGGGCGGCGGCG---TGGAGCTGTTGCCCGCCAGCTCGCGGAGCCGCCGCGAGAAGTCCATGGCGGGCGAGTCGATGGCCATGGGGTTCAGGCGCATGACTCGGTCGAAGGCACTGGGGTGCTGGGCGACGAGCCCCATCTCCTCGGCACTGAGGCG---------GTGCGGGTCCAGGTGGTGGCGCGGCGGGGGACTGAAGAGAGGCGGCGTGCCCGGCAGGCGGCCCT
464s mm5.chr12     102665346 625 + 115071072 AAGTCGCCATCGGCCGCTTTCAGG---TCACCTGGCAGCTCGCTGGTGCCCGGCTCAGGGGAGCTGGCAGCTGAGAGCCCGTCGTCTGAGCGGCCAGCCAGAGAGCCCGCCTTGTGCATGTGCGTCTTCATGTGGCGCTTGAGCTTGCTCGCCTGCGAGCACGCATGGTCGCACAGCTGGCACTTGTAGGGCTTCTCGCCCGTGTGGCTGCGCCGGTGCACGATGAGATTGCTCTGGAACTTGAAGGTCTTGCCGCAGAACTCACAGGACTTGCTCTTGGCAGGCGGCTGCGGTGGCGGTGTGCCCGCA---GGCATGGGTGGCAGCGGTGGCGTGCTGAGGAACGGGGACTTGGGACTGGGCTGGAA------AGGGTTCAGCAGCCGGTGCATAGGGTTGCCACGGCCTGGGGACACGGGCGGCGGCG---TGGAGCTGTTGCCGGCCAGTTCTCGCAGCCGCCGGGAGAAGTCCATGGCAGGAGAGTCTATGGCCATGGGGTTCAGGCGCATGACTCGGTCGAAGGCACTGGGGTGCTGGGCCACGAGCCCCATCTCCTCTGCACTGAGGCG---------GTGTGGGTCCAAGTGATGGCGTGGCGGTGGGCTGAAGAGCGGTGGCGTACCTGGCAAGCGGCCCT
465s rn3.chr6      132300723 625 + 147642806 AAGTCGCCATCGGCCGCTTTGAGG---TCACCTGGCAGCTCGCTGGTGCCGGGCTCTGGGGAGCTGGCGGCCGAGAGCCCATCGTCTGAGCGGCCAGCCAGCGAGCCCGCCTTGTGCATGTGCGTCTTCATGTGGCGCTTGAGCTTGCTCGCCTGCGAGCACGCGTGGTCGCACAGCTGGCACTTGTAGGGCTTCTCGCCCGTGTGGCTGCGCCGGTGCACGATGAGATTGCTCTGGAATTTGAAGGTCTTGCCGCAGAACTCACAGGACTTGCTCTTGGCAGGCGGCTGCGGTGGCGGCGTGCCCGTG---GGCATGGGTGGCAGCGGTGGCGTGCTGAGGAACGGGGACTTGGGGCTGGGCTGAAA------AGGGTTCAGCAGCCGGTGCATAGGGTTGCCACGGCCTGGGGACACGGGCGGCGGTG---TGGAGCTGTTACCGGCCAGTTCTCGCAGCCGCCGAGAGAAGTCCATGGCGGGAGAGTCTATGGCCATGGGGTTCAGGCGCATGACTCGGTCGAAGGCACTGGGGTGCTGGGCCACGAGCCCCATCTCCTCTGCACTGAGGCG---------GTGTGGGTCCAAGTGATGGCGTGGCGGTGGGCTGAAGAGCGGTGGCGTACCGGGCAGGCGGCCCT
466s canFam1.chr8   70560355 631 +  77374719 AAGTCGCCGTCGGCCGCCTTGAGGCCCTCGCCGGCCAGCTCGCTGGTGCCGGGCTCGGGGGAGCTGGCGGCCGAGAGCCCGTCGTCGGAGCGGCCGGCCAGCGAGCCGGCCTTGTGCATGTGCGTCTTCATGTGGCGCTTGAGCTTGCTCGCCTGCGAGCACGCGTGGTCGCACAGCTGGCACTTGTAGGGCTTCTCGCCCGTGTGGCTGCGCCGGTGCACGATGAGATTGCTCTGGAACTTGAAGGTCTTGCCGCAGAACTCGCACGACTTGCTCTTggcgggcggctgcggcggcggcgtgcccccggggggcATGGGCGGCAGCGGCGGCGTGCTCAGGAACGGGGACTTGGGGCTGGGCTGGAA------GGGGTTCAGGAGCCGGTGCATAGGGTTGCCGCGGCCCGGAGACACGGGCGGCGGCG---TGGAGCTGTTGCCCGCCAGCTCGCGGAGCCGCCGCGAGAAGTCCATGGCGGGCGAGTCGATGGCCATGGGGTTGAGGCGCATGACTCGGTCGAAGGCACTGGGGTGCTGGGCGACGAGCCCCATCTCCTCGGCACTGAGGCG---------GTGCGGGTCCAGGTGGTGGCGCGGCGGCGGGCTGAAGAGCGGCGGCGTGCCGGGCAGGCGGCCCT
467s galGal2.chr5   44594951 631 +  56310377 AAGTCTGTCTCACTGGATTTCAGTCCCTCTCCAGTGAGCTCGCTCGTGCCTGGCTCAGGAGAACTCGTGGTGGACAGTCCATCGTCTGACCTGCCTGTCATGGAGCCAGCTTTATGCATATGCGTTTTCATGTGACGCTTTAGCTTGCTGGCCTGGGAGCAAGCATGGTCACATAGCTGACATTTGTAGGGCTTTTCTCCTGTGTGACTACGCCGGTGGACGATAAGGTTGCTCTGGAACTTGAAGGTTTTCCCACAGAATTCGCAGGACTTACTCTTGGCCTGAGGCTGGGGAGGCGTAGTGCTGCTTGGGGGCATGGGGGGCAGTGGTGGGGTGCTCAAAAAAGGTGATTTAGGACTCGGCTGGAA------AGGATTCAACAGGCGATGCATAGGGTTGGTGCGACTGGGCGAGACTGGCGGAGGGG---TGGAACTGTTTCCTGCCAGCTCTCGAAGCCTTCTGGAGAAATCCATCGCTGGGGACTCAATTGCCATGGGGTTTAAACGCATAACTCTGTCAAAGGCACTGGGATGCTGGGCAACTAACCCCATTTCTTCGGCACTAAGGCG---------ATGTGGATCCAGATGATGACGAGGTGGTGGGCTGAATAGTGGAGGCGTGTTTGGGAGCCGACCCT
468s fr1.chrUn     275910993 637 + 349519338 AAGTCACCACCGTGGTTCTTCATGC------------GCTCACTTGTGCCTGGCTCCGGGGAACTTGTAGTTGATAGTCCATCATCCGAACGCCCAGTCAGTGAACCAGGCTTGTGCATGTGGGTCTTCATGTGGCGTTTCAGCTTACTCGCCTGAGAACATGCATGGTCACACAGCTGGCACTTGTAGGGTTTCTCTCCGGTGTGGCTTCGGCGATGCACAACCAAGTTGCTTTGGAACTTAAATGTCTTACCACAGAACTCACAGGATTTGACTTTGTTCTGCATCTGTGGAGGGCTAGTGCTGTTTGCGGGAGCCGGTGGTAAGGGAGGAGTGCACACAAAGGGTGACTTTGGCCCAATTTGAAAGGTGTTGGGGTTGAGTAATCGGTGAATATGGTTGGCCCTGCCTGGCGACAGCGGCGGTGTTGTACTGTTGCTATTACCCGCCAATTCACGTAACCTCCTGGAGAAGTCCATGGAGTGGGACTCCATGGACACGGGCGCGAGACGCATCACCTTTTCAAAGGCACTTGGGTGCTGTGAGATGAGACCCATTTCTTCTGTGCTAAGGCATTCTAGCCTATGGGAGTCCAGGTGGTGGCGGGCAGGGGGGCTAACAAATGCAGGCATGTTGGGCAGTCGGTTCT
469s danRer1.chrUn 103631027 646 + 367113659 AAATCACCATCCCGATTTTTTATACCCTCCCCAGTGACGTCACTAGTGCCTGGCTCAGGTGAGCTGGTGGTGGACAGGCCATCGTCAGAGCGCCCTGTCATGGAACCAGATTTGTGCATGTGGGTCTTCATGTGGCGTTTTAATTTGCTCGCTTGAGAACAAGCGTGGTCACACAATTGGCACTTGTAAGGTTTCTCGCCTGTGTGGCTTCGCCGATGAACAACCAGATTACTCTGAAACTTGAAGGTCTTGCCACAGAACTCGCAAGATTTCGACTTGCCCTGTGTCTGTGGCGGGGTGGTGCTGTTAGGGGGCATGGGAGGCAGTGGAGGGGTGCTCAGAAAGGGTGATTTCGGGCTGGGCTGAAAGGGGTTGGGATTGAGAAGGCGATGCATAGGGTTAGCACGGCTCGGTGACAATGGTGGAGTGG---AATTGTTGTTTCCAGCAAGCTCTCTCAATCGGCGGGAGAAATCCATGGACTGGGACTCCATGGCCATGGGTGTCATGCGCATCACTCTTTCGAAGGCACTGGGATGCTGGGAGATTAAACCCATTTCCTCTGCGCTAAGGCGTTCCAGGCGATGGGGATCTAAATGATGGCGTGGAGGGGGGCTGACAAAGGGAGGCGTATTGGGGATACGGTTTT
470
471a score=309091.0
472s hg17.chr14     98712006 203 + 106368585 CGCCGAAGCCC---G-GGTGGTCCCGCAGG--ATGGGGCCCGTCATGCGCAGCAGGTTGAAGGGGTTGCTG---TCGCCCAGGAAATTCATGAGCGGGGACTGCGCCACGGCCTCCGGCCCGAGCGGCGGCGGGATGGTGAGCCGCGGCGTGAGCGAGCTGCTGGCCGGCCCGGGCTCCAGGTAGATGCGGAAGCCGTGCGTGTTCTGCGCG
473s panTro1.chr15  99209872 203 + 106954593 CGCCGAAGCCC---G-GGTGGTCCCGCAGG--ATGGGGCCCGTCATGCGCAGCAGGTTGAAGGGGTTGCTG---TCGCCCAGGAAATTCATGAGCGGGGACTGCGCCACGGCCTCCGGCCCGAGCGGCGGCGGGATGGTGAGCCGCGGCGTGAGCGAGCTGCTGGCCGGCCCGGGCTCCAGGTAGATGCGGAAGCCGTGCGTGTTCTGCGCG
474s mm5.chr12     102665971 203 + 115071072 CACCGAAGCCA---G-GGTGGTCCCGCAGG--ATGGGGCCCGTCATGCGCAGCAGGTTGAAAGGATTGCTG---TCCCCCAGGAAATTCATGAGTGGGGACTGCGCCACGGTCTCCGGCCCGAGCGGTGGCGGGATGGTGAGCCTGGGCGTGAGCGAGGTGCTGGCCGGCCCAGGCTCCAGGTAGATTCGGAAGCCATGTGTGTTCTGTGCG
475s rn3.chr6      132301348 203 + 147642806 CTCCGAAGCCG---G-GGTGGTCCCGCAGG--ATGGGGCCCGTCATGCGCAGCAGGTTGAAAGGATTGCTG---TCCCCGAGGAAATTCATGAGTGGGGACTGCGCCACGGCCTCCGGCCCGAGCGGCGGCGGGATGGTGAGCCTGGGCGTGAGCGAGGTGCTGGCGGGCCCGGGCTCCAGGTAGATGCGGAAGCCATGCGTGTTCTGCGCA
476s canFam1.chr8   70560986 203 +  77374719 CGCCGAAGCCC---G-GGTGGTCCCGCAGG--ATGGGGCCCGTCATGCGCAGCAGGTTGAAGGGGTTGCTG---TCGCCCAGGAAATTCATGAGCGGGGACTGGGCCACGGCCTCGGGTCCCAGCGGCGGCGGGATGGTGAGCCGCGGCGTGAGCGAGCTGCTGGCCGGCCCGGGCTCCAGGTAGATGCGGAAGCCGTGCGTGTTCTGCGCG
477s galGal2.chr5   44595582 203 +  56310377 CACCAAAGCCA---G-GATGTTCACGCAAA--ATGGGTCCTGTCATCCGCAGAAGATTAAAAGGGTTGTTG---TCTCCAAGGAAATTCATCAGCGGGGACTGTGCAACAGTCTCTGGTCCCAGAGGAGGAGGGATGGTGATGCGTGGAGTAAGGGAACTGTTGGAAGGGCTTGTTTCCAGGTAGATGCGGAATCCATGTGTGTTCTGGGCA
478s fr1.chrUn     275911630 206 + 349519338 CGATAAAAGCA---GAGGCGGGCTCTCGAGTCACTGGGCCTGTCATTCTTAAGAGCTGGAAAGGGTTGTTT---TCCCCCAGAAAGTTGATGAGGGGGGGATGAGGGATGCAGTCATTGCCCATGGGTGGAGGCATGGTGATGCGTGGAGTTAGGGCTGCGCTCGAGGGATCTGACTCCAGGTATATGCGAATGCCATGCGTGTTTTGAGCA
479s danRer1.chr5    4283993 209 +  40038624 CGATGTAGCCATGCG-GCGGTTCTCGTAGC--AGTGGGGCACCCATACGCAACAGCTGGAAAGGGTTGCTGCCATCACCCAGAAAGCTGGCAAGTGGGGAACGAGGCAAGGCATCAGCCCCCAGTGGTGGAGGAAGAGCCATGCGAGGGGTAAGAGAGCAGCTAGTAGGGTGGGTGTCCAGGTAGATGCGTATCCCATGGGTGTTCTGTGCA
480
481a score=170742.0
482s hg17.chr14     98712209 76 + 106368585 TGCTGCAGCAGGAACCACGCGCTGTTGAAGGGCTGCTTGCATGTTGTGCAAATGTAGCTGGAAGGCTCATCTTT---AC
483s panTro1.chr15  99210075 76 + 106954593 TGCTGCAGCAGGAACCACGCGCTGTTGAAGGGCTGCTTGCATGTTGTGCAAATGTAGCTGGAAGGCTCATCTTT---AC
484s mm5.chr12     102666174 76 + 115071072 TGCTGCAGCAGGAACCAGGCGCTGTTGAAGGGCTGCTTGCATGTTGTGCAAATGTAGCTGGAAGGCTCATCTTT---AC
485s rn3.chr6      132301551 76 + 147642806 TGTTGCAGCAGGAACCAGGCGCTGTTGAAGGGCTGCTTACATGTTGTGCAAATGTAGCTGGAAGGCTCATCTTT---AC
486s canFam1.chr8   70561189 76 +  77374719 TGCTGCAGCAGGAACCACGCGCTGTTGAAGGGCTGCTTGCATGTTGTGCAAATGTAGCTGGAAGGCTCATCTTT---AC
487s galGal2.chr5   44595785 76 +  56310377 TGCTGAAGCAAGAACCAAGCGCTATTAAAAGGCTGCTTGCATGTTGTGCAAATATAGCTTGAAGGCTCATCTTT---AC
488s fr1.chrUn     275911836 79 + 349519338 TGCTGTAGCAGGAACCAGGCATTGGAAAACATCTGCTTACACGTGGTGCAGATATAACTGGAGGGCTCATCCCTCTGAC
489s danRer1.chrUn 103631683 76 + 367113659 TGCTGCAGAAGGAACCAGGCGTTGTAAAAGGGTTGTTTGCACGTTGTGCATATGTAACTTGAGGGTTCATCTCT---AC
490
491a score=412979.0
492s hg17.chr15     41486872 188 + 100338915 TTAGTGAGAAACATAATCGTGTTTATATTTTGGATGCTGCTTGAATCCAATTCTCTCCCCAACAATGAGGCACTGGATCACCCACTCTTGTGACACCACAGGCAGCTGCAATGCTTCAGCACACTTCAGCACCGAGGCTGGGCATGAGGGGTCCGTCACCACCACATCAAATACCCCTAAAGCAATAT
493s panTro1.chr16  41478602 188 + 101535987 TTAGTGAGAAACATAATCGTGTTTATATTTTGGATGCTGCTTGAATCCAATTCTCTCCCCAACAATGAGGCACTGGATCACCCACTCTTGTGACACCACAGGCAGCTGCAATGCTTCAGCACACTTCAGCACCGAGGCTGGGCATGAGGGGTCCGTCACCACCACATCAAATACCCCCAAAGCAATAT
494s mm5.chr2      120979995 188 + 181686250 TTAGTGAGAAACATAATCATGTTTATATTTTGGATGCTGCTTGAATCCAATTCTCTCCCCAACAATGAGGCACTGGATCACCCATTCTTGTGATACCACAGGCAGTTGCAAGGCTTCAGCACACTTGAGCACCGAGGCTGGGCATGAGGGGTCTGTCACCACCACATCAAATACCCCTAAAGCAATGT
495s rn3.chr3      107897216 188 + 170969371 TTAGTGAGAAACATAATCATGTTTGTATTTTGGATGCTGCTGGAATCCAATTCTCTCCCCAACAATGAGGCACTGGATCACCCATTCTTGTGATACCACAGGCAGCTGCAAGGCTTCAGCACACTTGAGCACCGAGGCTGGGCATGAGGGGTCTGTCACCACCACATCAAATACCCCTAAAGCAATGT
496s canFam1.chr30  13173383 188 +  43165425 TTAGTGAGAAACATAATCATGTTTGTATTTTGGATGCTGCTTGAATCCAATTCTCTCCCCAACAATGAGGCACTGGATCACCCACTCTTGTGACACCACAGGCAGCTGCAATGCTTCAGCACACTTCAGCACCGAGGCTGGGCATGAGGGATCCGTCACCACCACGTCAAATACCCCTAAAGCAATAT
497s galGal2.chr10     80159 188 -  20909726 TTAACGAGGGACATAGTCATGTTTGTATTTTGGATGCTTGTTGTAGCCTACTCTCTCTCCAGCAATAAGGCTCTGGATCACCCACTCTTGTGAGACAACAGGCAACCTTAATGCTTCTGCGCACTTCAAGACAACAGCTGGGCAGGAAAGATCAGTCACCACCACATCATAAACACCCAATGCAATAT
498s fr1.chrUn     325491827 188 - 349519338 GGATTATGACGCGTAGTTGTGGCGATACCGAGGCAGGCTATGGAAACCCAGGCACTCCCCACAGATCACACTCTGGATGAGCCACTCGGGAGACACCAGCGGCACTTCCTGTGATGCCATGTTCTTCTCCACTAGTGGGGAGCAGGTGTGGTCCGTCACCACAACGTCAAACTTGCCGGCAGGAATGT
499s danRer1.chrUn 117181337 182 - 367113659 TTACGTAGATGT---GTTGTGGCAGAATTCAGAATTGCTGTCGAAGTTGAGGCACTTTCCACAGATCAAGCTCTGAATCAGCCACTCCAGAGAGACAACAGGCATGTTTGAGGCC---ACACGCTTCACTTCCTTTGATGTACATGCTGATGATGTCACTGCCACATCAAACTTCACATCTGGAATGT
500
501a score=145507.0
502s hg17.chr15            41673708 149 + 100338915 ATGGCTGGTCCCTTCTCCCGTCTGCTGTCCGCCCGCCCGGGACTCAGGCTCCTGGCTTTGGCCGGAGCGGGGTCTCTAGCCGCTGGGTTTCTGCTCCGACCGGAACCTGTACGAGCTGCC---AGTGAACGACGGAGGCTGTATCCCCCGAG
503s panTro1.chr16_random  12462177 149 +  32210112 ATGGGTGGTCCCTTCTCCCGTCTGCTGTCCGCCCGCCCGGGACTCATGCTCCTGGCTTTGGCCGGAGCGGGGTCTCTAGCCGCTGGGTTTCTGCTCCGACCGGAACCTGTACGAGCGGCC---AGTGAACGACGGAGGCTGTATCCCCCGAG
504s mm5.chr2             121140425 152 + 181686250 ATGGCTGGTCCCTTCTCCCGTCTGCTGTCTGCCCGCCCTGGACTCAGGCTCCTGGCTTTGGCTGGAGCTGGGTCTCTCACCGCCGGGATTCTGCTCCGCCCGGAATCTGTAGGAGCTGCCGCTGCTGAACGGAGGAGACTGTATCCCCCGAG
505s rn3.chr3             108059196 152 + 170969371 ATGGCTGGTCCCTTCTCCCGTCTGCTGTCTGCCCGCCCCGGACTCAAGCTCCTGGCTTTGGCTGGAGCTGGGTCTCTCGCCGCCGGGATTCTGCTCCGTCCGGAATCTGTACGAGCGGCCACCGGTGAACGGAGGAGACTGTATCCCCCGAG
506s canFam1.chr30         13349240 149 +  43165425 ATGGCTGGTCCCTTCTCTCGTCTGCTGTCCGCGCGCCCGGGGCTCAGGCTCCTAGCTTTGGCTGGAGCTGGGTCTCTAGCCGCTGGGTTTCTGCTCCGCCCGGAACCTGTAAGAGCCGCC---AGTGAACGACGGAGGCTGTATCCCCCAAG
507s galGal2.chrZ          28834466 152 +  33651169 ATGGCTGGCACCTTTGGTCGTCTCCTGGCTGGCCGTGTGACTGCTGCACTTTTTGCAGCAGCAGGCACAGGGGTACTCACCACTGGGTACCTCCTCAACCAGCAAAATGTGAAAGCTACTGTGCATGAGAAGCGGAAGCTCTTCCCTCCCAG
508s fr1.chrUn             97204237 143 - 349519338 ATGGCGAGTAGCTTCTCCAGGGTTCTGATCTCCAG---AAACATCCGGATCCTGTCGCTGTTGGG---GGGTTCGGTCACAGCCGGGATCCTGCTGCAGCGGCACCATGTCGGCGCCGAC---GGCCCCACACGGAGGAGGTACCCCGCCAG
509s danRer1.chr4            497203 149 -  30025136 ATGGCTGGTTCAATTGGCAAGATGATGTCGAGCCGCACCACTGGCCTGCTCATGGCAAGCCTCGGAGCTGGTGCTTTGGCGACCGGATATATGATGAGTGACAGTGCTGCAATCTCTGCG---GACGAGAAGAGGAAACTCTACCCTCCCAG
510
511a score=250959.0
512s hg17.chr15     41679161 89 + 100338915 TCATAGCAGGTGGCCAAGGAAGCTGATAGTCAATACCAGGGACCAGGAAGGTCGTGACCAGTCCTGGAGGCCCCAGGCTGTACTTCGAC
513s panTro1.chr16  41682794 89 + 101535987 TCATAGCAGGTGGCCAAGGAAGCTGATAGTCAATACCAGGGACCAGGAAGGTCGTGACCAGTCCTGGAGGCCCCAGGCTGTACTTCGAC
514s mm5.chr2      121145551 89 + 181686250 TCATAATAGGTGGCCAAAAATGCTGACGGGCAATGCCAGGGCCCAGGAGGCTTGGAACCAGTCGTAGAGACCCCAGGCTGAGTTTCGAC
515s rn3.chr3      108064239 89 + 170969371 TTATAATAGGTGGCCAAAAAAGCTGATGGTTAGTGTCAGAGCCCAGGAAGCATGGAACCAGTCACAGAGACCCCAGGCTGAGCTTCGAC
516s canFam1.chr30  13354361 89 +  43165425 TCATATCAGGTTGCCAAGGAAGCAGATGGTCAATGCCATGGCCCAGGAGGGTTGTGACCAGTCCTGAAGGCCCCAGGCTGTGCTTCGAC
517
518a score=50892.0
519s hg17.chr15     41826029 40 + 100338915 ATGCGCCTCCGCCGCCTAGCGCTGTTCCCGGGTGTGGCGC
520s panTro1.chr16  41735415 40 + 101535987 ATGCGCCTCCGCCGCCTAGCGCTGTTCCCGGGTGTGGCGC
521s mm5.chr2      121195614 40 + 181686250 ATGCGCTTCAGCTGCCTAGCTCTGCTCCCGGGCGTGGCGC
522s rn3.chr3      108117268 40 + 170969371 ATGCGCTTCAGCTGCCTTGCGCTGCTCCCGGGCGTGGCGT
523s canFam1.chr30  13397631 40 +  43165425 ATGCGCCCCCGCTGCCGAGCGCTGCTCCCGGGCGTGGCGC
524
525a score=11434.0
526s hg17.chr15     41826069 20 + 100338915 TGCTTCTTGCCGCG---------------GCCCGC
527s panTro1.chr16  41735455 20 + 101535987 TGCTTCTTGCCGCG---------------GCCCGC
528s mm5.chr2      121195654 20 + 181686250 TGCTGCTCGCCTCG---------------GCCCGT
529s rn3.chr3      108117308 35 + 170969371 TGCTGCTCGCCTCGGCCCTCCTCGCCTCCGCCCTC
530s canFam1.chr30  13397671 20 +  43165425 TGCTTTTCGCCGCG---------------GCCGGT
531s fr1.chrUn      97210657 23 - 349519338 TGCTTTTAGCAGCG------------CTCACCGGC
532
533a score=118454.0
534s hg17.chr15     41826089 107 + 100338915 CTCGC---CGCTGCCTCCGACGTGCTAGAACTCACGGACGACAACTTCGAGAGTCGCATCTCCGACACGGGCTCTGCGGGCCTCATGCTCGTCGAGTTCTTCGCCCCCTG
535s panTro1.chr16  41735475 107 + 101535987 CTCGC---CGCTGCCTCCGACGTGCTAGAACTCACGGACGACAACTTCGAGAGTCGCATCTCCGACACGGGCTCTGCGGGCCTCATGCTCGTCGAGTTCTTCGCCCCCTG
536s mm5.chr2      121195674 107 + 181686250 CTCGC---CGCCGCCTCCGATGTGTTGGAACTGACGGACGAAAACTTCGAGAGTCGCGTCTCCGACACGGGCTCGGCGGGGCTCATGCTAGTCGAGTTCTTCGCCCCCTG
537s rn3.chr3      108117343 107 + 170969371 CTCGC---CTCCGCCTCAGACGTGTTGGAACTGACGGACGAAAACTTCGAGAGTCGCGTCTCCGACACGGGCTCAGCTGGGCTCATGCTAGTCGAGTTCTTCGCCCCATG
538s canFam1.chr30  13397691 107 +  43165425 CTCGC---CTCTGCCTCCGACGTGCTGGAACTCACTGACGACAACTTCGAGAGTCGCATCTCCGACACGGGCTCTGCGGGCCTCATGCTCGTCGAGTTCTTCGCTCCCTG
539s fr1.chrUn      97210680 101 - 349519338 TTCACGCAGGCCGCCAGTGATGTGCTGGAGTTCACGGATAACGATTTCGAAAGTAAAATCGGAGACC---------ATGAAATTATTCTTGTGGAGTTTTTCGCACCCTG
540s danRer1.chr17  15314657  98 +  35757233 CTCGT---GGAGGGCAGCGATGTGCTGGAGCTCGGAGATTCTGACTTTGA---------CCGGAGCGCAGGCATGCATGACACTCTGCTAGTGGAGTTCTTCGCACCTTG
541
542a score=88002.0
543s hg17.chr16             142908 95 +  88827254 ATG----TCTCTGACCAAGACTGAGAGGACCATCATTGTGTCCATGTGGGCCAAGATCTCCACGCAGGCCGACACCATCGGCACCGAGACTCTGG-AGAG
544s panTro1.chr18          150233 95 +  83875239 ATG----TCTCTGACCAAGACTGAGGGGACCATCATTGTGTCCATGTGGGCCAAGATCTCCACGCAGGCCGACACCATCGGCACCGAGACTCTGG-AGAG
545s mm5.chr11            32172234 95 + 121648857 ATG----TCTCTGATGAAGAATGAGAGAGCTATCATCATGTCCATGTGGGAGAAGATGGCTGCTCAGGCCGAGCCCATTGGCACTGAGACTCTAG-AGAG
546s rn3.chr10            95139962 95 - 110733352 ATG----TCTCTGATGAAGAATGAGAGAGCTATCATCATGTCCATGTGGGACAAAATGGCGCCTCATGCAGAGCCCATTGGCACTGAGACTCTGG-AGAG
547s canFam1.chr6         37152261 96 -  79106041 ATG----TCTCTGACCAAGGCCGAGAGGACCATCATCCTGTCCATGTGGGGCAAGATCTCCACCCAGGCGGATGCTATTGGCACCGAGGCCCTGGAAGAG
548s galGal2.chr14        13958597 95 +  20603938 ATG----GCACTGACCCAAGCTGAGAAGGCTGCCGTGACCACCATCTGGGCAAAGGTGGCTACCCAGATTGAGTCCATTGGGCTGGAATCACTGG-AGAG
549s fr1.chrUn           269729641 95 + 349519338 ATG----AGTCTGAGCAGGACTGACAAGGAGGCCGTGAAGGCCATTTGGGCCAAAATGTCCAAGAGCATTGATGTCATCGGGGCCGAGGCGTTTG-GCAG
550s danRer1.chrFinished  33475840 95 -  40167097 ATGAGTCTCTCTGCCAAAGAC----AAAGCTGCCGTCAAAACCCTGTGGGCCAAGATCGCTGGAAAGGCTGACGACATCGGACACGATGCTCTCT-CCAG
551
552a score=39370.0
553s hg17.chr16       179963 35 +  88827254 TTACTTGTATTTCGCACTTCGGTCCCGGGAAGCCC-
554s panTro1.chr18    195782 35 +  83875239 TTACTTGTATTTCGCACTCCGGTCCCGGGAAGCCC-
555s mm5.chr17      68693958 35 -  93559791 TTACTTGTATTTTGTACTCCGGTCCCTGGAAGCCC-
556s rn3.chr10      95183773 35 - 110733352 TTACTTGTATTTTGTACTCCGGTCCCTGGAAGCCC-
557s canFam1.chr6   37185997 35 -  79106041 TTACTTGTATTTCGCACTCCGGTCCCTGGAAGCCC-
558s fr1.chrUn     145482403 32 + 349519338 TTACTTGTGTCTGGAGCCGTGCTC----GTGGCTGT
559
560a score=142911.0
561s hg17.chr16       179998 137 +  88827254 GACGATGTCCCCGGCTGTGGCTCCGGGAACGGCTGCGGTGGCGCCGATGTCTATCTCGGGACCGGGACCGGGACAATTTCCGTCGC---TCTCGGGAGGTAGATCTTGACCGCCTCCGACGCCGATCCCGGGAGCGTGAC
562s panTro1.chr18    195817 137 +  83875239 GACGATGTCCCCGGCTGTGGCTCCGGGAACGGCTGCGGTGGCGCCGATGTCTATCTCGGGACCGGGACCGGGACAATTTCCGTCGC---TCTCGGGAGGTAGATCTTGACCGCCTCCGACGCCGATCCCGGGAGCGTGAC
563s mm5.chr17      68693993 137 -  93559791 GGCGGTGACCCCGGCTGTGGCTCCGGGAACGGCTGCGATGGCGCCTGTATCTATCTCGGGATCTGGAACGGGAAAACTTCCGCCGC---TCTCTGGAGGTAGACCTAGACCGCCTCCGTCGACGATCCCGGGAGCGTGAC
564s rn3.chr10      95183808 137 - 110733352 GTCGGTGACCCCGGCTGTGGCTCCGGGAACGGCTGCGATGTCGCCGGTATCTATCTCGGGACCTGGAACGGGAAAACTTCCGCCGC---TCTCGGGAGGTAGACCTAGACCGCCTCCTTCGACGATCCCGGGAACGTGAC
565s canFam1.chr6   37186032 137 -  79106041 GGCGGTGGCCCCGGCTGTGGCTCCGGGAACGGCTGCGGTGGCGCCGGTGTCTGTCTCGGGACCGGGACCGGGATGACTTTCGTCGC---TCCCTGGAGGTAGATCTGGACCTCCTCCGACGCCGGTCCCGGGAGCGTGAC
566s galGal2.chr1  142364883 137 - 188239860 GGCTGCGACTCCGGCTGCGGCTGTTGGAGCGAGACCTGTGGCGATGGCGTTTCTCACGGGATTTAGAGCGAGTTCTTCTTTTCCGT---TCCCTGGAGGCTGAGCGAGAGCGATGTCTGCGACGATCTCGGGACCTAGAT
567s fr1.chrUn     145482435 134 + 349519338 GACGGTGTCCTCGGTTGCGGGAGCCCGATCTGCTGCGATGCCTCCTCCTCCTGTCCCTGGAGCGCGAACGGGAA------CGGCGCTTGTCTCGAGACGTCGAACGCGAGCGTCTCCTCCTGCGGTCACGAGAGCGGGAC
568
569a score=23245.0
570s hg17.chr16      244413 4 +  88827254 ATGT
571s panTro1.chr18   262355 4 +  83875239 ATGT
572s mm5.chr17     68753542 4 -  93559791 ATGA
573s rn3.chr10     95244723 4 - 110733352 ATGA
574s canFam1.chr6  37249961 4 -  79106041 ACGA
575
576a score=198450.0
577s hg17.chr16      244417 264 +  88827254 TGGACCACAAGGACTTAGAGGCCGAAATCCACCCCTTGAAAAATGAAGAAAGAAAATCGCAGGAAAATC-TGGGAAATCCATCAAAAAATGAGGATAA----CGTGAAAAGCGCGCCTCCACAGTCCCGGCTCTCCCGGTGCCGAGCGGCGGCGTTTTTTCTTTCATTGTTTCTCTGCCTTTTTGTGGTGTTCGTCGTCTCATTCGTCATCCCGTGTCCAGACCGGCCGGCGTCACAGCGAATGTGGAGGATAGACTACAGTGCCGCTG
578s panTro1.chr18   262359 264 +  83875239 TGGACCACAAGGACTTAGAAGCCGAAATCCACCCCTTGAAAAATGAAGAAAGAAAATCGCAGGAAAATC-TGGGAAATCCATCAAAAAATGAGGATAA----CGTGAAAAGCGCGCCTCCACAGTCCCGGCTCTCCCGGTGCCGAGCGGCGGCGTTTTTTCTTTCATTGTTTCTCTGCCTTTTTGTGGTGTTCGTCGCCTCATTCGTCATCCCGTGTCCAGACCGGCCGGCGTCACAGCAAATGTGGAGGATAGACTACAGTGCCGCTG
579s mm5.chr17     68753546 264 -  93559791 TGGACAACAAGGACTTAGAAGCTGAAATACACCCCTTGAAGAATGAGGACAAGAAATCACAGGAAAACC-CAGGAAACCTACCAAGAAACGAAGATAA----CTTGAAGAGCAAGCCTGTGCCTTCCCGCTTGTCCCGGTGCCGCACAGTGGCATTTTTCCTTTCCCTGTTCACCTGCCTCTTCGTGGTGTTTGTCCTGTCTTTCATCATCCCATGTCCAGACCGTCCCTCCTCACAGGGCACGTGGAAGCTTGACTACAACAATGCAG
580s rn3.chr10     95244727 264 - 110733352 TGGATGACAAGGATCTAGAAGCTGAAATACATCCCTTGAAGAATGAGGACAAAAAGTCACAGGAAAACC-TAGGAAACCTACCAAAGACCGAGGACAA----CTTGAAGAACAAGCCTGTGCCTTCTCGCTTGTCCCGGTGTCGCACGGTGGCATTTTTCCTTTCCCTGTTCATCTGTCTCTTTGTGGTGTTTGTCCTCTCTTTCATCATCCCATGCCCAGACCGACCGTCCTCTGAGGACAAGTGGAGGCTGGACTACGACTATGCAG
581s canFam1.chr6  37249965 264 -  79106041 TGGACAGCAAGGACCTAGAAGCCGAAATCCACCCCCTGAGGAACGAAGACAAGAGGCTGCCCGAGACCC-CGGGAAACCCGGGCCACGCAGACGAGAA----GCTGAAAAGCTCGCCCCGGCAGCCCCGCCTCTCCCGGTGCCGCACCGTTGTGTTTTTTCTTTCACTGTTTGTCTGCCTGTTCGTAGTGTTCGTGGTTTCGTTCATCATCCCGTGCCCGGAACGGCCCGTGTCGCAGGGGATGTGGCGGATAGACTACAGCGCGGCAG
582s galGal2.chr14  6505218 264 -  20603938 TGGATAACAAAGACTCAGAAGCTGAGATCCACCCCCTGAAGACAGAGGACGTGAAAGCTCAAGAGAACCATGAGAACTCTGTTGA-----GAGGAGAATCATCATCAAGCAGTCGTCGCAGCTGTCTCGGCTGTCCCGCTGGCGCACCGCCGCCTTCTTCATCTCATTATTTCTGTGTCTCATCATCGTGTTTGCCTTCTCCTTTATCATTCCTTGCCCTGAGAGGCCTGTCTCAGAGAGAACGTGGCTCCGAAACTATGACAATGCAG
583
584a score=3883.0
585s hg17.chr16       259268 28 +  88827254 C-TAGGCCACCCCAT----CTCCACCCCCAGGG
586s mm5.chr17      68763356 29 -  93559791 CCTACTACTCCCCAT----CGGCACCTTCAGGG
587s rn3.chr10      95254895 29 - 110733352 CTTAGTCCTCCTCAT----TGCCACCTGCAGGG
588s canFam1.chr6   37261496 28 -  79106041 -CTAGGTGCCCCTGT----CCCCGCACGCAGGG
589s fr1.chrUn      32270640 32 + 349519338 -CTTGGCCTGTCCGTCCTGCTCCGCCATCCGGG
590s danRer1.chrNA 221970878 28 + 390413307 CCCTGGGGCCTCTAT-----TGCAAGTCCAGGG
591
592a score=-1898.0
593s hg17.chr16     259296 9 +  88827254 CCACAAGCC
594s mm5.chr17    68763385 9 -  93559791 GAACTGGTT
595s rn3.chr10    95254924 9 - 110733352 GAGCTGGTA
596s canFam1.chr6 37261524 9 -  79106041 TCACTTGCA
597s fr1.chrUn    32270672 9 + 349519338 CCGATGCCT
598s danRer1.chr1  5581271 9 +  40858791 CCATCATCC
599
600a score=2916.0
601s hg17.chr16      259305 2 +  88827254 GC
602s mm5.chr17     68763394 2 -  93559791 GC
603s rn3.chr10     95254933 2 - 110733352 GC
604s canFam1.chr6  37261533 2 -  79106041 GC
605s galGal2.chr14  6519763 2 -  20603938 GC
606s fr1.chrUn     32270681 2 + 349519338 GC
607s danRer1.chr1   5581280 2 +  40858791 TC
608
609a score=1053.0
610s hg17.chr16      259307 19 +  88827254 TG---TGGGCTCCACAGGGGTG
611s mm5.chr17     68763396 19 -  93559791 TG---CAGGCTCCCTGGGGGTA
612s rn3.chr10     95254935 19 - 110733352 TG---CAGGCTCCCCAGAGGTC
613s canFam1.chr6  37261535 22 -  79106041 AGTCACAGGCTCTGCAGATGTG
614s galGal2.chr14  6519765 19 -  20603938 CT---CGGTGTCACCGGCGGGC
615s danRer1.chr1   5581282 13 +  40858791 TG---TGG------TATGGGTG
616
617a score=-178.0
618s hg17.chr16    259307 28 + 88827254 TGTGGGCTCCACAGGGGTGGGAAGGAGT
619s danRer1.chr1 5581282 19 + 40858791 TGTGG------TATGGGTGACGAGA---
620
621a score=499.0
622s hg17.chr16      259326 3 +  88827254 GGA
623s panTro1.chr18   279072 3 +  83875239 GGG
624s mm5.chr17     68763415 3 -  93559791 GAC
625s rn3.chr10     95254954 3 - 110733352 GAC
626s canFam1.chr6  37261563 3 -  79106041 GGA
627s galGal2.chr14  6519784 3 -  20603938 AGG
628
629a score=4058.0
630s hg17.chr16      259329 6 +  88827254 AGGAGT
631s panTro1.chr18   279075 6 +  83875239 AGGAGT
632s mm5.chr17     68763418 6 -  93559791 TGGAGA
633s rn3.chr10     95254957 6 - 110733352 TGGAGA
634s canFam1.chr6  37261566 6 -  79106041 AGGAGC
635s galGal2.chr14  6519787 6 -  20603938 AGCAGG
636s danRer1.chr1   5581295 6 +  40858791 ACGAGA
637
638a score=70372.0
639s hg17.chr16      259335 48 +  88827254 GCAGGGCTGGGGCTCGAGTGCCGTGGCCTCCACGTAAACGGGAACACG
640s panTro1.chr18   279081 48 +  83875239 GCAGGGCTGGGGCTCGAGTGCCGTGGCCTCCACGTAATTGGGAACACG
641s mm5.chr17     68763424 48 -  93559791 GCAGGGCTGGGGCTTGAGTGCAGAGGCTTCCGCAAGAATGGAAATGGC
642s rn3.chr10     95254963 48 - 110733352 GCAGGGCTGGGACTTGAGTGCAGAGGCTTCCGCAAGAATGGGAATGGC
643s canFam1.chr6  37261572 48 -  79106041 GTGGGGCTGGGGCTCGGGTGTGGCGGCTTCCGCAGGAACGGAAAGGCC
644s galGal2.chr14  6519793 48 -  20603938 GCCGGGCTGGGGCTGGAGTGTCGCTGCTTGCGCATGAAGGGGAACACC
645s fr1.chrUn     32270683 48 + 349519338 GCGGGGGAGGGGCTGGCGTGCCGCTGGCGTCTCATGAAGGGGAAGACG
646s danRer1.chr1   5581301 48 +  40858791 GCAGGCGAGGGGCTGGAGTGGCGCTGCCGACGCATGAACGGGAACACA
647
648a score=5348.0
649s hg17.chr18     23786114 2 +  76117153 TC
650s panTro1.chr17  19719396 2 +  73346066 TC
651s mm5.chr18      16960413 2 +  91083707 TC
652s rn3.chr18       8050213 2 +  87338544 TC
653s canFam1.chr7   19431300 2 -  83037113 TC
654s galGal2.chr2  103976638 2 + 147590765 TC
655s fr1.chrUn     291830820 2 - 349519338 TC
656s danRer1.chrNA 203940100 2 - 390413307 TC
657
658a score=389078.0
659s hg17.chr18     23786116 205 +  76117153 AGTCATCA---CCTCCACCATACATGTCAGCAAGTTTCTTGAACCGTGGCCCCCAGTCGTTCAGGTAATCATAGTCCTGCTCACCACCACTACTTGAGGAATTAAGGGAGCTCAAGGACCCAGCAGTGGAGCCACTGCCTTCATAGTCAAACACTAACAGGGAGTCATATGGTGGAGCTGTGGGGTCATTGTCAGCCGCTTTAAGGCC
660s panTro1.chr17  19719398 205 +  73346066 AGTCATCA---CCTCCACCATACATGTCAGCAAGTTTCTTGAACCGTGGCCCCCAGTCGTTCAGGTAATCATAGTCCTGCTCACCACCACTACTTGAGGAATTAAGGGAGCTCAAGGACCCAGCAGTGGAGCCACTGCCTTCATAGTCAAACACTAACAGGGAGTCATATGGTGGAGCTGTCGGGTCATTGTCAGCCGCTTTAAGGCC
661s mm5.chr18      16960415 205 +  91083707 AGTCGTCA---CCACCGCCGTACATGTCCGCCAGTTTCTTGAAGCGGGGTCCCCAGTCATTCAGGTAGTCATAGTCCTGGTCCCCACCGCTACTGGAGGAGTTGAGGGAGCTCAAGGAGCCAGCCGTGGAGCCGCTGCCCTCGTAGTCAAAGACTAAGAGGGAGTCATACGGTGGCGCCGTGGGGTCGTTGTCAGCAGCTTTAAGGCC
662s rn3.chr18       8050215 205 +  87338544 AGTCATCA---CCACCACCATACATGTCGGCCAGCTTCTTGAAGCGGGGTCCCCAGTCATTCAGGTAGTCATAGTCCTGGTCCCCGCCGCTGCTGGAGGAGTTGAGAGAGCTCAAGGAGCCAGCCGTGGAGCCGCTGCCCTCATAGTCGAAGACTAAAAGGGAGTCATATGGTGGCGCCGTGGGGTCATTGTCAGCAGCTTTAAGGCC
663s canFam1.chr7   19431302 205 -  83037113 AGTCATCA---CCTCCACCATACATGTCAGCAAGTTTCTTGAACCGTGGCCCCCAGTCGTTCAGGTAGTCATAGTCCTGCTCGCCACCACTACTTGAAGAATTAAGGGAGCTCAAAGACCCAGCGGTAGAGCCACTGCCTTCGTAGTCAAAGACTAAGAGGGAGTCATATGGTGGAGCTGTGGGATCATTGTCAGCAGCTTTAAGGCC
664s galGal2.chr2  103976640 205 + 147590765 AGTCATCA---CCTCCACCGTACATGTCAGCAAGTTTCTTGAAACGTGGGCCCCAGTCATTTAGGTAGTCATAGTCTTGCTCACCACCGCTACTTGAGGAATTAAGAGAGCTCAAGGATCCAGCAGTGGAGCCGCTTCCTTCATAGTCAAAGACTAAGAGGGAATCGTATGGCGGGGCTGTAGGGTCGTTGTCGGCTGCTTTAAGTCC
665s fr1.chrUn     291830822 205 - 349519338 AGTCATCGTCCCCTCCACCGTACAGGTCGGCCAGCTTCTTGAAGCGGGGGCCCCAGTCGTTGAGGTAGTCGTAGTCCTGGTCGCCCGAGCTGAT---GGAGTTGAGCGAGCTGACGGAGCCGGCTGTCGAGCCGGTGCCCTCGTAGTCGAACACCAGCAGGGAGTCGTAGGGAGGGGCCGTGGGGTCGTTATCCGCTGCTCTCAGACC
666s danRer1.chrUn 257546281 205 - 367113659 AGTCGTCG---TTACCTCCGTACATGTCGGCGAGTTTGCGGAAGCGAGGGCCCCAATCGTTGAGGTAGTCATAGTCCTGGTCTCCTCCGCTGCTGGACGAGTGAAGGGAGCTTAGTGAGCCGGCCGTGGAGCCGCTGCCCTCGTAGTCAAACACCAGCAGGGAGTCATACGGAGGGGCCGTGGGATCGGTGTCGGCTGCCTTGAGGCC
667
668a score=581809.0
669s hg17.chr18     59406881 165 +  76117153 ATGGATTCACTTGGCGCCGTCAGCACTCGACTTGGGTTTGATCTTTTCAAAGAGCTGAAGAAAACAAATGATGGCAACATCTTCTTTTCCCCTGTGGGCATCTTGACTGCAATTGGCATGGTCCTCCTGGGGACCCGAGGAGCCACCGCTTCCCAGTTGGAGGAG
670s panTro1.chr17  56243482 165 +  73346066 ATGGATTCACTTGGCGCCGTCAGCACTCGACTTGGGTTTGATCTTTTCAAAGAGCTGAAGAAAACAAATGATGGCAACATCTTCTTTTCCCCTGTGGGCATCTTGACTGCAATTGGCATGCTCCTCCTGGGGACCCGAGGAGCCACCGCTTCCCAGTTGGAGGAG
671s mm5.chr1      106957557 165 + 195203927 ATGGACTCACTAGGCACAGCAGCCACACAGTTCCTGTTTGATCTTTTCAAAGAACTGAATAAAACAAATGATGGCAACGTCTTCTTTTCCCCTGTGGGCATCTCAACAGCCATTGGCATGATCATCCTGGGGACCCGAGGAGCCACTGCTTCTGAGTTACAGAAG
672s rn3.chr13      13176896 165 + 111348958 ATGGACTCACTAAGCACAGCAACCACACATTTCCTGTTTGATCTTTTCAAAGAACTGAATAAAACAAGTGACGGCAATGTCTTCTTTTCTCCTTTGGGCATCTCAACAGCCATTGGCATGATCCTCTTGGGGACCCAAGGAGCCACTGCCTCTGAGTTACAGAAG
673s canFam1.chr1  108508362 165 - 124897793 ATGGATTCACTTGGTGCAGCATACACTCACTTTGGGTTTAATCTCTTCCAAAAGCTGAATAAAATAAATGATGGCAACATCTTCTTTTCCCCTGTGGGCATTTCTGCTGCCATTGGCATGCTCATCCCAGGGGCCCGAGAAGCTACCGCCATGCAGTTGCAGAGG
674
675a score=1700.0
676s hg17.chr18     59455932 2 +  76117153 CT
677s panTro1.chr17  56296086 2 +  73346066 CT
678s mm5.chr1      106995539 2 + 195203927 TT
679s rn3.chr13      13306377 2 + 111348958 TT
680s canFam1.chr1  108539809 2 - 124897793 CT
681s galGal2.chr2   67392007 2 + 147590765 TA
682s fr1.chrUn      39424675 2 - 349519338 CT
683s danRer1.chr20  11152772 2 +  31913010 TT
684
685a score=2707.0
686s hg17.chr18     59455934 3 +  76117153 ATG
687s panTro1.chr17  56296088 3 +  73346066 ACG
688s mm5.chr1      106995541 3 + 195203927 AAG
689s rn3.chr13      13306379 3 + 111348958 AAG
690s canFam1.chr1  108539811 3 - 124897793 AAG
691s galGal2.chr2   67392009 3 + 147590765 ATG
692s fr1.chrUn      39424677 3 - 349519338 CAG
693s danRer1.chr20  11135889 3 +  31913010 ATG
694
695a score=316154.0
696s hg17.chr18     59455937 400 +  76117153 GGGATGAGAATCTGCCATAGAAGAGGATGCT-GTTGGTCTTATTTTGCCTTATGAAGAATAGGAAAGGGTGATTACAACAGAACTCTT--CATTAGTTGAAGGAGAT-GAT---------AATTCGACT-------ACTACTACAGCGGTGGCAGCTGCAGCTTCCACTCCCTCCTCAGTGACCTCCACAAAGGCCTTGTGTAGGACTTTAGATACTGAGAGACCGTGGCTCCAGGTCATGCCT-------------------------------------------------------------------------------------GAGAGGTCTGCATCCC---CATTGAAGATATTCACCATTCCCATGGTTCTCAACGTGTCCTTGAGGTCATAGCTCTC---TTCCATTTTGAACCGAGGTAAGTGTAAATCGACACATGTCT---CTCTCATATTCTGCAAACTTGTCCATTCCATCAATTTCTCAGCAGTGAGTTTCTCTTCAAG
697s panTro1.chr17  56298740 400 +  73346066 GGGATGAGAATCTGCCATAGAAGAGGATGCT-GTTGGTCTTATTTTGCCTTATGAAGAATAGGAAAGGGTGATTACAATGGAACTCTT--CATTAGTTGAAGGAGAT-GAT---------AATTCGACT-------ACTACTACAGCGGTGGCAGCTGCAGCTTCCGCTCCCTCCTCAGTGACCTCCACAAAGGCCTTGTGTAGGACTTTAGATACCGAGAGACCGCGGCTCCCAGTCATGCCT-------------------------------------------------------------------------------------GAGAGGTCTGCATCCC---CATTGAAGATATTCACCATTCCCATGGTTCTCAACGTGTCCTTGAGGTCATAGCTCTC---TTCCATTTTGAACCGAGGTAAGTGTAAATCGACATGTGTCT---GTCTCATATTCTGCAAACTTGTCCATTCCATCAATTTCTCAGCAGTGAGTTTCTCTTCAAG
698s mm5.chr1      106995544 391 + 195203927 GGGAAGAGATTGTGCCAAAGAAGAGGATGCT-GTTGGTCTTACTGTGCTTGACCAAT---------GGATGATCACAATAGAAATCTT--CTGTAATCTGTAAAGATAAAT---------TATGGGATT-----------TTATCCCCGTGGTAGCAGCAGCTTCTGTTCCCTCTTCATTTACCTCCACAAAGGACTTGTGTAAAACTTTAGACACCACAAGACCTTGAGTGCTGTTCATGCCA-------------------------------------------------------------------------------------GAGAAGTCAGCCTTCTGTGGATCAAAGGCGCCAACCATCCCCATGTGTTTCAATGGAACTGAGAGGTCATACTTCTC---TTCCACTTTGAACCGAGGCAAAGATAAATACAACTCGGTCA---TATGCATATTTTCTGCTCTTGTCCATTCTAGTAACTTTTCAGTAGAGAGTTGTTCTTCAAG
699s rn3.chr13      13306382 400 + 111348958 GAGAAGACATTCTGCCAAAGAAGAGGATGCT-GTTGGTAGCATTGTGCTTGATGAGGAATAAGAAAGGGTGATCACAATTGAAGTCTT--CGGTTATCTGTGCTGAT-GTT---------AAACTGACT----------TCTACCCCCGTGGCAGCAGCAGCTTCTGTCCCCTCTTCATTTACCTCCACAAAGGACTTGTGTAAAACTTTAGACACCATTAGACCTTGAGTGCTGCTCATGCCT-------------------------------------------------------------------------------------GAGAAGTCAGCCTTCTTTGAGTCAAAGGCGTCCACCATCCCCATGTGCTGCAACGGACCTGGGAGGTCATACTTCTC---TTCCACTTTGAACCGTGGCAAAGACAAATACAAGTCGATCA---TGTTCATGTTCTCTGCTCTTGTCCACTCTAGTAACTTGTCAGCAGTGAGCTGTTCTTCAAG
700s canFam1.chr1  108539814 397 - 124897793 GGGAAGAGACTCTGCCCAAGAAGAGGATGCT-GTTGGTCTTATTGTGCTTGATGAAGAACAGGAAAGGGTGATCGCAATGAAA-----------AGGATAGATTGGT-GCT---------GATTTGGCA----ATAACTTCTACGTCTGTGGAGGCTGCAGCCTCCGTGCCCTCTTCGGTGACCTCCACAAAGGACTTGTGCCTGACTTTAGACACCACAAGATCCTGCCTCCCTGTCATGCCT-------------------------------------------------------------------------------------GAGAAGTTGGCCCTCTTTGTGTTGAAGGCATCCACCATTCCCAGGGCTTTCAGCGTGGCCTTGAGCTCATAACTCTC---TTCTACTTTGAACCGGGGTAAGTATAAATCCACCTGCCCAT---TGCTCATATTCTGTGAGCTCGTCCACTCTATTAGGTTCTCAGCAGTGAGTTGATCTTCAAG
701s galGal2.chr2   67392038 400 + 147590765 GAGAGCAATATCTGCCACAGAACAAAATACT-GGAAGTTTTGTTGTGCCGGATGAAGAAGAGGAAGGGATGATCGGCAGTGAA------------GTCGGGAACGAT-CAT---------AGCACAACGGAGCACCATCACTCCTGCTGTGGCAGCTGCTGCTTCAGTGCCTTCTTCGTTGACCTCCACGAAGGACTTGTGAACCACTTCAGAGAGCACAAGCTCGTTACCAGAGGAGATTCCT-------------------------------------------------------------------------------------GAGAAGTTCGCCATCCGTAAGTCAAACGCATCACGCATTCCCATGTTGCTCAGGATGGGTTTCAGATCATAATTTTC---TTCCAGTTTAAATCTGGGTAAAGACAGCCTCACTTCTGTAC---TGTCCATCATTTCAGGATTGATCCAATCCATCAGCTTCTCGTATGTAAGTTCTCTTTCCAG
702s fr1.chrUn      39424680 486 - 349519338 GAGAGCAATATCTACCAGCAAACAGAATGTTCCTTGGAGGGGTTGTGTCTGATGAAGAAGAGGAAAGGATGGTCTGCATAGAA-----------ATTCTGAGGGAAT-ACTGCACAGTGCAAAGTGAAG----------ACAACACCAGTGGCAGCAGCAGCCTCAGTTCCCTCCTCATTGACTTCCACAAAAGCTTTGTGAATCACTTCTGACAGGACCAGGTCATTGGCTGGAGACATGCCTGTCAGTCAGAGGGAAAGAGAATATTTCCCATTAATATGATGGCTTGTCTCTTCTGAAAAGGCTCTTTGGAGAAAGTCTCCTACCAGAGAAGTCGCTCGCGGCTACATCAAAGGCATCCACCATGCCCATGCTGACCAGGATGTTCTTCATGTTACATTTCTC---CTCCATCTTGAACCGTGGCAGACCCACCTGGACTTCGACTA---CATTCATCATGTCTGGACGAGTCCACTCCATGAAGTTGTCATAGGTCAGCAGCTTCTCCAG
703s danRer1.chr20  11135892 406 +  31913010 GGGCTCTGAATCTGCCCAGAAAAAGGATGCT-GTTAGTGGGGTTGTGTCTGATGAAGAACATGAAGGGATGATCGGCTATGAAATCATGAAATGCACCTTGACAAGC-ACT---------GATTGGTAA---------TAACAATGCAGTTGCTGCTGCTGCTTCAGTTCCTTCCTCATTGACCTCAACAAAAGCCTTGTGAATCACTGCTGAAAGAAAGAGACCACCATTACTGCTCATGCCT-------------------------------------------------------------------------------------GTCAGATCAGCCTTGGTTTCCTGGAACACAGAGCTCATGCCCATCTTTTCCAGTGTTTCTGATAG---ACAGCTCTCAATCTCCAACTTGAACTTTGGCAGACGGACAATGATCTTTCTCCATGTGTCCATTTTGCCTCTACTGGTCCAGTCAAGCAGCTTTTGGAGGTTCAACTCGCTCTCCAG
704
705a score=170132.0
706s hg17.chr18     59600586 168 +  76117153 ATGGCCTCCCTTGCTGCAGCAAATGCAGAGTTTTGCTTCAACCTGTTCAGAGAGATGGATGACAATCAAGGAAAT------GGAAATGTGTTCTTTTCCTCTCTGAGCCTCTTCGCTGCCCTGGCCCTGGTCCGCTTGGGCGCTCAAGATGACTCCCTCTCTCAGATTGATAAG
707s panTro1.chr17  56457248 168 +  73346066 ATGGCCTCCCTTGCTGCAGCAAATGCAGAGTTTTGCTTCAACCTGTTCAGAGAGATGGATGACAATCAAGGAAAT------GGAAATGTGTTCTTTTCCTCTCTGAGCCTCTTCGCTGCCCTGGCCCTGGTCCGCTTGGGCGCTCAAGATGACTCTCTCTCTCAGATTGATAAG
708s mm5.chr1      107433492 168 + 195203927 ATGGCCTCCCTTGCTGCAGCAAATGCAGAATTTGGCTTCGACTTATTCAGAGAGATGGATAGTAGCCAAGGAAAT------GGAAATGTATTCTTCTCTTCCCTGAGCATCTTCACTGCCCTGACCCTAATCCGTCTGGGTGCTCGAGGTGACTGTGCACGTCAGATTGACAAG
709s rn3.chr13      13464817 168 + 111348958 ATGGCCTCCCTTGCTGCAGCAAATGCAGAATTTGGCTTCGACTTATTCAGAGAGATGGATAGTAGTCAAGGAAAC------GGAAATGTATTCTTCTCTTCCCTGAGCATCTTCACTGCCCTGAGCCTAATCCGTTTGGGTGCTCGAGGTGACTGTGCACGTCAGATTGACAAG
710s canFam1.chr1  108653495 168 - 124897793 ATGGCCTCCCTTGCTGCAGCAAATGCAGAGTTTTGCTTCAATCTGTTCAGAGAGATGGATAACAATCAAGGAAGT------GAAAATGTGTTCTTTTCTTCCCTGAGCATCTTCACTGCCTTGGCCCTGGTCCGTTTGGGCGCACGGGGTGATTGTGTTTCCCAGATTGATAAG
711s danRer1.chrNA  84211897 168 + 390413307 ATGGAGTCTCTGTCTGCAGCAAACACACAGTTTTCCCTCAACCTGTTCAAGAAGAT------CAGCGGAGGAAACGCATCAGGAAATGTGTTTTATTCTCCTGTCAGCATCTCCTCGGCTCTGGCCATGGTGTCGCTCGGTGCCAAAGGAAACACCGCAGATCAGATGTTTAAG
712
713a score=40916.0
714s hg17.chr19        59068595 56 +  63811651 ATGCCAGTGACGGTAACCCGCACCAC----------CATCACAACCACCACGACGTCATCTTCGGG
715s panTro1.chr20     56482145 56 +  61571712 ATGCCAGTGACGGTAACCCGCACCAC----------CATCACAACCACCACGACGTCATCTTCGGG
716s mm5.chrUn_random  23451477 45 - 102265694 ATGCCGGTAACAGTAACTCGTACAAC----------CATCACG---ACTACAACGTCA--------
717s rn3.chr1         203863650 45 - 268121971 ATGCCGGTCACAGTCACCCGTACAAC----------CATCACA---ACTACATCATCA--------
718s canFam1.chr1      18886888 56 - 124897793 ATGCCTGTGACGGTGACCCGCACGAC----------CATCACAACCACCACGTCGTCATCCTCAGG
719s danRer1.chr2       9429255 61 -  32943701 ACGTCAAACCAAAGTACTCCCATTACTCCTGTCTGACATCACAGTCCCTGTAAC-TCTCCTC----
720
721a score=19097.0
722s hg17.chr19        59068651 29 +  63811651 CCTGGGGTCCC-CCATGATCGTGGGGTCCC
723s panTro1.chr20     56482201 29 +  61571712 CCTGGGGTCCC-CCACGATCGTGGGGTCCC
724s mm5.chrUn_random  23451522 22 - 102265694 -------TCCT-CCACCACTGTGGGGTCCG
725s rn3.chr1         203863695 22 - 268121971 -------TCCT-CCACCACTGTGGGGTCCG
726s canFam1.chr1      18886944 29 - 124897793 CCTGGGCTCCC-CAACCATCGTGGGGTCCC
727s fr1.chrUn        129654883 29 + 349519338 CCTGCGATTTC-CCGCCATGCCGGTGTTCA
728s danRer1.chr2       9429316 30 -  32943701 TCTGTGATCCCATCATGGCAGTGGTGTTGC
729
730a score=0.0
731s hg17.chr19 59068680 4 + 63811651 CTCG
732
733a score=2300.0
734s hg17.chr19        59068680 4 +  63811651 C--TCG
735s panTro1.chr20     56482230 4 +  61571712 C--TCG
736s mm5.chrUn_random  23451544 4 - 102265694 C--TCG
737s rn3.chr1         203863717 4 - 268121971 C--CCG
738s canFam1.chr1      18886973 4 - 124897793 C--TCG
739s fr1.chrUn        129654912 6 + 349519338 CGGTCA
740
741a score=66381.0
742s hg17.chr19        59068684 64 +  63811651 GGCCCTGACACAGCCCCTGGGTCTCCTTCGCCTGCTGCAGC--TGGTGTCTACCTGCGTGGCCTTC
743s panTro1.chr20     56482234 64 +  61571712 GGCCCTGACACAGCCCCTGGGTCTCCTTCGCCTGCTGCAGC--TGGTGTCTACCTGCGTGGCCTTC
744s mm5.chrUn_random  23451548 64 - 102265694 GGCGCTGACCCAGCCGCTGGGCCTCCTCCGCCTCCTGCAGC--TAATATCCACCTGTGTGGCTTTC
745s rn3.chr1         203863721 64 - 268121971 GGCGCTGACCCAGCCCCTGGGCCTCCTCCGCCTCCTGCAGC--TAGTATCCACCTGTGTGGCTTTC
746s canFam1.chr1      18886977 64 - 124897793 GGCGCTGACCCAGCCCCTGGGCCTCCTCCGTCTGCTGCAGC--TGCTGTCCACCTGTGTGGCCTTC
747s galGal2.chr18      4859021 64 +   8919268 GGCTGTGACATCTCCAGTGGGAATAGTTCGTTTGCTGCAGA--TGATGTTTGGATGCACCACGTTC
748s fr1.chrUn        129654918 59 + 349519338 TGCTCTCCCAGGTCTTCTGGGT-------GCGTTTAGCAGCTTTGTTGTTCACCTGTGTGGCCTTC
749s danRer1.chr2       9429346 59 -  32943701 GTTCCTCACCTCTCCTGTGGACCCGAGTGGCTGCCA-------TGGTTTTCGCCTGCGTGGCCTTC
750
751a score=20765.0
752s hg17.chr19        59068748 35 +  63811651 TCGCTGGTGG-C---TAGCGTGGGCGCCTGGACGGGGTC
753s panTro1.chr20     56482298 35 +  61571712 TCGCTGGTGG-C---TAGCGTGGACGCCTGGACGGGGTC
754s mm5.chrUn_random  23451612 35 - 102265694 TCGCTGGTGG-C---CAGTGTGGGTGCCTGGACAGGGCC
755s rn3.chr1         203863785 35 - 268121971 TCACTGGTGG-C---CAGTGTGGGTGCTTGGACAGGGCC
756s canFam1.chr1      18887041 35 - 124897793 TCCCTGGTGG-C---CAGTGTGGGTGCTTGGACCGGGGC
757s galGal2.chr18      4859085 36 +   8919268 AGCCTGGTGGCC---CACCAGGGGGGATTCAGCGCAGCA
758s fr1.chrUn        129654977 35 + 349519338 AGCTTGGCAG-CGCACGGCGCCAACGTCC--ACGGGGG-
759
760a score=827754.0
761s hg17.chr19        59068783 773 +  63811651 CATGGGCAACTGGTCCATGTTCACCTGGTGCTTCTGCTTCTCCGTGACCCTGATCATCCTCATCGTGGAGCTGTGCGGGCTCCAGGCCCGCTTCCCCCTGTCTTGGCGCAACTTCCCCATCACCTTCGCC-TGCTATGCGGCCCTCTTCTGCCTCTCGGCCTCCATCATCTACCCCACCACCTATGTCCAGTTC-----C--------TGTCCCACGGCCGTTCGCGG------GACCACGCCATCGCCGCCACCTTCTTCTCCTGCATCGCGTGTGTGGCTTACGCCACCGAAGTGGCCTGGACCCGGGCCCGGCCCGGCGAGATCACTGGCTATATGGCCACCGTACCCGGGCTGCTGAAGGTGCTGGAGACCTTCGTTGCCTGCATCATCTTC---GCGTTCATCAGCGACCCCAACCTGTACCAGCACCAGCCGGCCCTGGAGTGGTGCGTGGCGGTGTACGCCATCTGCTTCATCCTAGCGGCCATCGCCATCCTGCTGAACCTGGGGGAGTGCACCAACGTGCTACCCATCCCCTTCCCCAGCTTCCTGTCGGGGCTGGCCTTGCTGTCTGTCCTCCTCTATGCCACCGCCCTTGTTCTCTGGCCCCTCTACCAGTTCGATGAGAAGTATGGCGGCCAGCCTCGGCGCTCGAGAGATGTAAGCTGCAGCCGCAGC------------CATGCCTACTACGTGTGTGCCTGGGACCGCCGACTGGCTGTGGCCATCCTGACGGCCATCAACCTACTGGCGTATGTGGCTGACCTGGTGCACTCT--GCCCACCTGGTTTTTGT-CA
762s panTro1.chr20     56482333 773 +  61571712 CATGGGCAACTGGTCCATGTTCACCTGGTGCTTCTGCTTCTCCGTGACCCTGATCATCCTCATCGTGGAGCTGTGCGGGCTCCAGGCCCGCTTCCCCCTGTCTTGGCGCAACTTCCCCATCACCTTCGCC-TGCTACGCGGCCCTCTTCTGCCTCTCGGCCTCCATCATCTACCCCACCACCTATGTCCAGTTC-----C--------TGCCCCACGGTCGTTCGCGG------GACCACGCCATCGCCGCCACCTTCTTCTCCTGCATCGCGTGTGTGGCTTACGCCACCGAAGTGGCCTGGACCCGGGCCCGGCCCGGCGAGATCACTGGCTATATGGCCACCGTACCCGGGCTGCTGAAGGTGCTGGAGACCTTCGTGGCCTGCATCATCTTC---GCGTTCATCAGCGACCCCAACCTGTACCAGCACCAGCCGGCCCTGGAGTGGTGCGTGGCGGTGTACGCCATCTGCTTCATCCTAGCGGCCATCGCCATCCTGCTGAACCTGGGGGAGTGCACCAACGTGCTACCCATCCCCTTCCCCAGCTTCCTGTCGGGGCTGGCCTTGCTGTCTGTCCTCCTCTATGCCACTGCCCTTGTTCTCTGGCCCCTCTACCAGTTCGATGAGAAGTATGGCGGCCAGCCTCGGCGCTCGAGAGATGTAAGCTGCAGCCGCAGC------------CATGCCTACTACGTGTGTGCCTGGGACCGCCGACTGGCTGTGGCCATCCTGACGGCCATCAACCTACTGGCGTATGTGGCTGACCTGGTGCACTCT--GCCCACCTGGTTTTTGT-CA
763s mm5.chrUn_random  23451647 785 - 102265694 CATGGGTAACTGGGCCATGTTCACCTGGTGTTTCTGCTTTGCTGTTACCCTCATCATCCTGATTGTGGAGTTAGGTGGACTCCAGGCCCACTTCCCCCTGTCATGGCGAAACTTCCCCATCACCTTTGCC-TGCTACGCGGCCCTCTTCTGCCTGTCGTCTTCCATCATCTATCCCACCACCTATGTGCAGTTC-----C--------TAGCTCATGGACGTACCCGG------GACCATGCCATCGCTGCCACCACTTTCTCCTGCGTTGCCTGTTTGGCGTATGCCACTGAAGTGGCCTGGACCCGTGCAAGGCCCGGTGAGATCACTGGCTATATGGCTACCGTGCCAGGGCTGCTCAAAGTTTTTGAGACCTTCGTAGCCTGTATCATCTTT---GCCTTCATCAGTGAGCCGCTCCTGTATAATCAGAAGCCAGCCCTGGAGTGGTGTGTGGCAGTCTATGCCATCTGCTTCATACTAGCAGGGGTGACCATCCTGCTCAACCTGGGGGATTGTACCAACGTGTTGCCCATCCCTTTCCCCACCTTCCTCTCAGGCTTGGCCTTACTCTCTGTTCTCTTTTACGCCACTGCCATCGTCCTCTGGCCCCTCTACCAATTTGATCAGAGATATCAGGGCCAACCCCGCCGTTCAATGGATCCAAGCTGCACTCGTAGTATTAGTTATATACAACCCAACACGGTGTGTTTCTGGGACCGACGACTGGCGGTGTCCATCCTGACAGGTATCAACCTGCTGGCATATGTGTCTGATCTGGTGTACTCC--ACTCGTCTGGTGTTCGT-CA
764s rn3.chr1         203863820 779 - 268121971 CATGGGTAACTGGGCCATGTTCACCTGGTGTTTCTGCTTTGCTGTTACCCTCATCATCCTGATTGTGGAGTTAGGTGGATTCCAGGCCCGCTTCCCCCTGTCATGGCGAAACTTCCCTATCACCTTCGCC-TGTTACGCGGCCCTCTTCTGCCTGTCGTCTTCCATCATCTATCCCACCACCTACGTGCAGTTC-----C--------TACCTCACGGACGTTCCCGG------GACCACGCCATCGCTGCCACCACCTTCTCCTGCGTTGCCTGTTTGGCGTATGCTACTGAAGTGGCCTGGACTCGTGCAAGGCCTGGTGAGATCACTGGCTACATGGCTACCGTGCCAGGGCTGCTCAAAGTGTTCGAGACCTTCGTAGCCTGCATCATCTTT---GCCTTCATCAGTGAGCCGAGCCTGTACCAGCAAAGGCCGGCCCTGGAATGGTGTGTGGCAGTCTATGCCATCTGCTTCATCCTAGCAGCAGTGACCGTCCTACTCAACCTGGGGGATTGTACCAACATGCTGCCCATCCCTTTCCCTACCTTCCTGTCAGGCCTGGCCTTACTGTCTGTGCTCCTTTACGCCACTGCCATCGTCCTCTGGCCCCTCTACCAATTTGATCAGAGGTATAACAGCCAACCCCGCCGTTCAATGGATCCAAGCTGCTCTCGTAGT------TATGTACAACCCAATGAAGTGTGTAACTGGGACCGACGGCTGGCGGTGTCCATCCTGACAGGTATCAACCTGCTGGCATATGTGTCTGATCTGGTGTATTCC--ACCCGTCTGGTGTTCGT-CA
765s canFam1.chr1      18887076 773 - 124897793 CATGGGCAACTGGTCCATGTTCACATGGTGCTTCTGCTTCGCTGTGACCCTCATCATCCTAATAGTCGAGTTAGGTGGCCTCCAGTCCCGCTTCCCCCTGTCCTGGAGAAACTTCCCCATCACCTACGCC-TGCTACGCTGCCCTCTTCTGCCTGTCGGCCTCCATCATCTACCCCACCACCTACGTTCAGTTC-----C--------TGTCTCATGGCCGCTCCCGG------GACCATGCCATCGCCGCCACTGCCTTCTCCTGCATCGCTTGTGTGGCTTATGCCACCGAAGTGGCCTGGACCCGGGCCCGTCCCGGAGAGATCACCGGCTACATGGCCACTGTGCCGGGCCTGCTCAAGGTGCTGGAGACCTTTGTGGCCTGCATCATCTTC---GCCTTCATCAGCAACCCCTCCCTGTACCAGCACCAGCCGGCCCTGGAGTGGTGTGTGGCCGTCTACTCCATCTGTTTCATCCTGGCGGCTGTGGCCATCCTACTGAACCTGGGGGACTGCACCAACATGCTGCCCATCTCCTTCCCCAGTTTCCTGTCGGGCCTGGCCCTGCTCTCCGTCCTGCTGTATGCCACGGCTCTGGTTCTCTGGCCGCTCTACCAGTTCAACGAGAAGTATGGTGGCCAGCCCCGTCGGTCGAGGGATGTTAGCTGCGCCGACAGG------------CACACCTACTACGTGTGTACCTGGGACCGCCGCCTGGCTGTGGCCATCCTGACAGCCATCAACCTGCTGGCTTACGTGGCTGACCTGGTGTACTCG--GCCCGCCTGGTTTTTGT-TA
766s galGal2.chr18      4859121 763 +   8919268 TAC-GGCACTTTCTGCATGTTCGTCTGGACCTTCTGCTTTGCTGTCACTGTCTTTATCATTACCTGCGAGTTCACGCACCTGCACAGCTGTCTGAGCATCTCCTGGGGAAACTTCACAGCTGCGTTCGCCATGCT-CGCCACGCTCATGTCGGTCACAGCGGCGGTGATCTACCCGCTCTACTTCGTGCAGCTCGGCTGC--------TACCCCATCACC-TGCGAGG-TGAGAGACTTCCGCATAGCGGCCAGCGTCTTTGCCGGCCTCGTGTTCGTTGTGTATGGCGCGGAGGTGTTCTTGACCAGAGCCAAACCAGGACAGGTCACCAGCTACATGGCCACTGTCTCTGGGCTCCTGAAGATCGTACAGGCCTTTGTGGCTTGCATCATCTTTGGGGCGCTGGTGAACGA---CAGCCAGTATAGCAAATACGTGGCCACACAGTGGTGCGTGGCCGTCTACAGCTTCTGCTTTATGGTCACGGTGGTGGTGGTCGCCTTCAGTGTCACTGGTAAGACCGCCCAGCTGTGCTTCCCCTTCGAGCGCTCTGTGGTCGTCTACACTTTCGGGGCCGTCCTGCTGTACGTGAGCGCGGCCGTCATCTGGCCGGTGTTCTGCTTTGACAGCAAGTACGGCTCCCCGCAGCGCC---------------------CCAGCGCC------------TGTGCCAAGGGCAGGTGCCCCTGGGACAGCCAGCTGGTGGTGGCCATCTTCACCTACGTCAACCTGCTGCTCTACGTGGTAGACCTGGCGTACTCCCAGCGCATCCGCTTCGTATCCC
767s fr1.chrUn        129655012 728 + 349519338 CATGGCTGACTGGTGCATCTTCTGCTGGGTGTTCAGCTTCACCTGCACTCTGCTGGTCCTGCTGGTGGAGCAGTTTGGCCTTCAGGCCCGCATCCCAGTCTCCTGGTCCAACTTCCCCATCACCGTGGCC-TGCTACGCCGCCCTCCTCTGCCTGTCTGCTTCCGTCATCTTTCCCCTGTTCTTCCTGAAGGAG-----CAGGGGTGGTGGTACGCCGACGAACGCAG--------CTTCCGCATCACCTCCACGATCTTCTCCTGCCTGGCGGCGGTGGCCTACATCTGCGAGGTGAGCCTGACCAAGGCGAAACCCGGACAGGTGGCGGGATACATGGCCACGGTCCCGGGCCTCCTGAAGGTGTGCCAGACCGTTGTGGCCTGCATCATCTTC---ATCCTGATCAGCAACCCCGTCTCCTACAGCCACCACGCGGCGCTGGAGTGGTGCATGGCCGTTTACTGCATCTGCTTCATCGTCTCCATGGTGGTGGTGATCCTGTGCGTGGGCGAATGCACCGGGTTTCTCCCGGTCCCCTTCTCCCAGTTCCTGTCAGCGTACGGCCTCCTGGCCTTCCTCATGTACTTGTCAGCTGTCATCGTCTGGCCCATTTTCACGTTTGACAAAAAGTA------------CCGGCGTGGAGGCGATAT--------GTCAAAGC-----------------------------------AGATCGGCG--TGGCAGTG------CTCACCGCCATCAACATGCTGCTGTACCTCGCTGACCTGGTCTACACC--GCTCACCTGGTGTTCAT-CA
768s danRer1.chr2       9429440 764 -  32943701 CACCGGCGACTGGTGCGTGTTCTGCTGGAGCTTCAGTTTCGTGGGAACTCTTCTAATCATCCTAGTGGAGATGTTTGGCCTGCAGACGCGTGCCCCAGTCTCGTGGAAGAACTTTCCCATCACGTTCGCC-TGCTACGCCTCTCTCCTCTGCCTCTCTGCGTCCATCATATTCCCCTTGTACTTCCTGAAGGGC-----T--------T---TGCTGGGCGCACTGAGATGATTAACTGCCGCATCGTGTCCACTGTATTTTCTTGCCTTGCTACTATCGCCTATTTAAGCGAGGTGAGTCTCAGTAAGGCCCGTCCAGGAGAAGTGTCCGGCTACATGGCTACCGCACCAGGGCTGCTAAAAGTGTGCGAAACCTTCATCGCCTGCATCATCTTC---GTCTTCATCAGCGAGCCCGAGTCGTACAAACAGAATGCGGCGACCCAGTGGTGTTTGGCTGTGTACTGCATCTGCTTCATTTTATCGGCAGGCATCATTGTGATGTGTGTTGGCGAATGCACAGGTTGCTTGCCTTTCTCCTTCGCCCGCTTCCTATCCACGTATGCCCTGCTGGCTGTGAGCATGTATCTGTCGGCCACCATCATCTGGCCCATTTATAAGTTCGACAATAAGCACGGAGGCCAGAGCCACCGACCAA------------ACATCTGCGGG------------TCCAGCATTGGACTTTGCCCGTGGGACAAACTGGTCGCCATTACTGTGCTCAGCTCGCTTAACTTCATTCTTTATCTGGCTGATCTCATTTACTCC--GCAAGGCTAGTGTTTGT-TA
769
770a score=10623.0
771s hg17.chr19        59069556 8 +  63811651 AGGTCTAA
772s panTro1.chr20     56483106 8 +  61571712 AGGTCTAA
773s mm5.chrUn_random  23452432 8 - 102265694 AGGTCTGA
774s rn3.chr1         203864599 8 - 268121971 AGGTCTAA
775s canFam1.chr1      18887849 8 - 124897793 GGGTTTGA
776s galGal2.chr18      4859884 8 +   8919268 ACATCTGA
777s danRer1.chr2       9430204 8 -  32943701 ATGCTTAA
778
779a score=64200.0
780s hg17.chr19    59236026 120 +  63811651 CTACACTTTCAGTGCCGCATATTCATGAGATCCTGGGGGCTCCTGGGTGGTGT-CTGAAGCTGCCTCAGACAGGGCGCTGGTGCTTAGCTCAGCATAGGTCACTCCTTGGGGG--TCTGCCGT
781s panTro1.chr20 56680126 120 +  61571712 CTACACTTTCAGTGCCGCATATTCACGAGATCCTGGGGGCTCCTGGGTGGTGT-CTGAAGCTGCCTCAGACAGGGCGCTGGTGCTTAGCTCAGCATAGGTCACTCCTTGGGGG--TCTGCCGT
782s canFam1.chr1  18994847 123 - 124897793 CTTCACCTGCCGCACTGCACATTCACAAGATCCTGGGGACTCCTCGGTGGGGCACAGAAGCTGCCTTAGGTGGTGCCTTGGGGTTTAGATCAGCATGGCTCACTCCCTGGGGGGTCTTTCAGT
783
784a score=41374.0
785s hg17.chr19       59297998 10 +  63811651 ATGGCTGCGA
786s mm5.chr7_random  31672903 10 +  46185828 ATGGCCGGGA
787s rn3.chr1        204132123 10 - 268121971 ATGGCTGCTA
788s canFam1.chr1     19108689 10 - 124897793 ATGGCCGGGA
789
790a score=139739.0
791s hg17.chr19       59302168 120 +  63811651 TCAGTCAGAGGCTGGGCTGGCCAGGGTCGGGTAGGGCAGCAGTTTGTCTGGACCCCGAGAAACCCAACTGGAATCCAGGGCCTCATCTGCTTCAAAGCCAAAGTCTTCCTCAACCTTAAT
792s panTro1.chr20    56743920 120 +  61571712 TCAGTCAGAGGCTGGGCTGGCCAGGGTCGGGTAGGGCAGCAGTTTGTCTGGACCCCGAGAAACCCAACTGGAATCCAGGGCCTCATCTGCTTCAAAGCCAAAGTCTTCCTCAACCTTAAT
793s mm5.chr7_random  31675860 120 +  46185828 TTAGTCAAAGGGTGGGCTGGCCAGGGTAGGGTAGGGTAGCAATTTGTCTGGCTCTCGGGAAACCCAACTTGAATCCAAGGCCTCATCTGCTTCAAAGCCAAAGTCTTCCTCAACCTTAAT
794s rn3.chr1        204134929 120 - 268121971 TTAGTCAAAGGGTGGGCTAGCTAGGGTAGGGTAGGGTAGCAATTTGTCTGGCCCTCGGGAAACCCAACTTGAATCCAAGGCCTCATCTGCTTCAAAGCCAAAGTCTTCCTCGACCTTAAT
795s canFam1.chr1     19111006 120 - 124897793 TCAGTCAAATGGGGGACTGGCTAGGGTGGGGTAGGGCAGCAGTTTGTCTGGCCCCCGAGAAACCCAACTGGAGTCCAGGGCCTCATCTGCTTCGAAGCCAAAGTCTTCCTCGACCTTAAT
796
797a score=46787.0
798s hg17.chr2     118288583 7 + 243018229 ATGTCAC
799s panTro1.chr13   4310009 7 + 134309081 ATGTCTC
800s mm5.chr1       73854532 7 - 195203927 ATGTCGC
801s rn3.chr13      77744300 7 - 111348958 ATGTCGC
802s canFam1.chr19  21837737 7 -  56914383 ATGTCCC
803
804a score=62416.0
805s hg17.chr2     118288590 78 + 243018229 ACCTGCCGATGAAACTCCTGCGTAAGAAGATCGAGAAGCGGAACCTCAAATTGCGGCAGCGGAACCTAAAGTTTCAGG
806s panTro1.chr13   4310016 78 + 134309081 ACCTGCCGATGAAACTCCTGCGTAAGAAGATCGAGAAGCGGAACCTCAAATTGCGGCAGCGGAACCTAAAGTTGCAGG
807s mm5.chr1       73854539 78 - 195203927 AGTTACAGATGAAACTCCTGCGCAGGAAGATCGAGAAGCGGAATGCCAAGCTGCGGCAGCGAAACCTGAAGCTGCAAG
808s rn3.chr13      77744307 78 - 111348958 AGTTACAGATGAAACTCCTGCGCAAGAAGATCGAAAAGCGGAACGCCAAGCTGCGGCAACGGAACCTGAAGCTGCAAG
809s canFam1.chr19  21837744 78 -  56914383 ATCTACCCATGAAACTCCTGCGCAAGAAGATAGAGAAACGGAATCTCAAGTTGCGCCAGCGAAACCTGAAGCTCCGGG
810s galGal2.chr7    7730657 78 -  37338262 ACCTGCCCATGCGGCTGCTCCGCAAGAAGATCCACAAGAGGAACCTGAAGCTGCGGCAGCGCAACCTGAAGCTGCGGG
811
812a score=141298.0
813s hg17.chr2     118394148 8 + 243018229 TCAGGAGG
814s panTro1.chr13   4415862 8 + 134309081 TCAGGAGG
815s mm5.chr1       73920237 8 - 195203927 TCAGGAGG
816s rn3.chr13      77811845 8 - 111348958 TCAGGAGG
817s canFam1.chr19  21899390 8 -  56914383 TCAGGAGG
818s galGal2.chr7    7752959 8 -  37338262 TCAGGAAG
819
820a score=65234.0
821s hg17.chr2     118394156 46 + 243018229 CCTTCGCTTTCACCTTGGACAGCAGCATCTCGTTCTTGCGGCCCTC
822s panTro1.chr13   4415870 46 + 134309081 CCTTCGCTTTCACCTTGGACAGCAGCATCTCATTCTTGCGGCCCTC
823s mm5.chr1       73920245 46 - 195203927 CCTTGGCTTTGATCTTAGATAGTAATAGCTCATTCTTTCGGCCCTC
824s rn3.chr13      77811853 46 - 111348958 CCTTGGCTTTGATCTTAGACAGTAATAGCTCATTCTTTCGGCCCTC
825s canFam1.chr19  21899398 46 -  56914383 CCTTGGCTTTCACCTTGGACAGCAGCACCTCATTCTTGCGGCCCTC
826s galGal2.chr7    7752967 46 -  37338262 AACTAGCTTTCAGCTTGGACAGCAGCATTTCGTTCTTACGACATTC
827s danRer1.chr9    4164500 46 -  28422069 CTTTAGCCCTCAGTTTAGACAACAGCATCTCATTCTTACGGCACTC
828
829a score=68843.0
830s hg17.chr2     220190202 40 + 243018229 ATGCTCAAAGCGGTGATCCTGATTGGAGGCCCTCAAAAGG
831s panTro1.chr13 110354917 40 + 134309081 ATGCTCAAAGCGGTGATCCTGATTGGAGGCCCTCAAAAGG
832s mm5.chr1       75883503 40 + 195203927 ATGCTCAAAGCTGTGATTCTCATTGGAGGCCCCCAGAAGG
833s rn3.chr9       74861356 40 + 113649943 ATGCTCAAAGCTGTGATCCTCATTGGAGGACCCCAGAAGG
834s canFam1.chr37  28991402 40 +  33897405 ATGCTCAAAGCTGTGATCCTGATTGGAGGCCCTCAAAAGG
835s fr1.chrUn     298594715 40 - 349519338 ATGTTGAAGGCAGTTATTTTAATCGGAGGCCCACAGAAGG
836s danRer1.chrUn 200789632 40 + 367113659 ATGCTGAAGGCTGTCATTCTTATCGGAGGCCCCCAAAAAG
837
838a score=2052.0
839s hg17.chr2     220229609 2 + 243018229 TC
840s panTro1.chr13 110394704 2 + 134309081 TC
841s mm5.chr1       75920524 2 + 195203927 TT
842s rn3.chr9       74897410 2 + 113649943 TT
843s canFam1.chr37  29028801 2 +  33897405 TC
844s galGal2.chr7   14430359 2 -  37338262 TC
845s fr1.chrUn     298724631 2 - 349519338 TC
846s danRer1.chrUn 144716830 2 + 367113659 TT
847
848a score=1675466.0
849s hg17.chr2     220229611 1258 + 243018229 AGGTGCTGTTGCCCTGCTCCTGTTCAAAGAGTAGCATGGCCAGCTGGGTTCGGGAGCCGAGGCCCTCAAGCACGCTCTGGAGGCAGCGGTGGTACAGGTCCTCACTGAGCCTCGCGCTGCACGTCTGGGCCCGGTAGCGCTGCAGCAGCGCCGGCTCCACCGCCCGCAGCACATGCAGACTGGAGAAGTGGAGGAACAGCTCGTACACATCCAGGCTCTCCAGCAGCTCCTCTTCTTGTTCTGAGGCTGCCGCCAGGCGCCCACGGGCTGCCACATAGTCGGAGTTGTAGAAGCAGGCCTCGCTGGCTGCCTGGCGATCAAAGCGGCCAGTGTCACGGCCCAGCTCTGGGGGCCCAGG----CCCTTGTGGTGG----------------------GGCCACAGCTGGGTGGAAGGCTTGGAAATGCATGGGAAAGAAGGCCTGCCAGCCGGAGATGGCATGCATGCGGCAGCGGTTCAGGAAGTCAGGCGTGAGCACCGTGTCTGGCCCGGCCAGCAGGAACAGTGTGTCCAGCGGGTGCTTCTTGGAGAGTAGATCCATGAGGCGCAGTGGTGAGGGTGCGGCTGTCTGCACACTGAGCCATGGCACCCGGGCACCGGGGAAACGCCGCTCCAGCTCTGCCACGTGGGCCTTGACAGGTGCGAAGACATCTGCATGGGCCACGCGCTGGGCCTGGCGCGGCTCATACAGTAGCAGCAGGGTCAGGGCTGCCGCAGCATCACCAGGCTCCAGTGCTGCAGTGGCAAAGGCCTCCAAGAAGCCAGGGGCCAGGTCACGCTCAGCCGCAGCTAGAGGCAGCAGCACAGTGAGACGTGAGGCCTCAGTGACATAGGGCACAGGCAAGATCTCCACGCGGCTCAGCGGCCGGAGCAGCTGCACTCGGCGAGTGAGGGGCCGGCGGCCTCCCTGGGGGGTCAGTGCCTCCAGCTGCAAGTCCAGCGTGTATTCCATACCCCGGGCCGGATCAAAGCGTCGGTAGCCATTCACCAGCTGCTGCTTCTGGAGCCGCAAGGCCGGGTGGTAGCGGCGGTTCAGCTCCTCTAGAGCTGTCCCCAGAACATCGGCCACATCAGCCCGGTCAGCCCCACGCAGTGGGCAGCGGGGTGAGCCATCGGCGCAGGAGAAAGCGTGCTGCTCCGTGAAGTAGTCCCAGCGCAGCACCTCAAAGCGGGAGGCCGGGCGGGATGGTGCTGGAATACCCACGGGCCAAGCAGCTGCCTGGTCCCCATCAACGGCCAGATGGCTGGTATTCTGGATCTCCCA
850s panTro1.chr13 110394706 1258 + 134309081 AGGTGCTGTTGCCCTGCTCCTGTTCAAAGAGTAGCATGGCCAGCTGGGTTCGGGAGCCGAGGCCCTCAAGCACGCTCTGGCGGCAGCGGTGGTACAGGTCCTCACTGAGCCTCGCGCTGCACGTCTGGGCCCGGTAGCGCTGCAGCAGCGCCGGCTCCACCGCCCGCAGCACATGCAGACTGGAGAAGTGGAGGAACAGCTCGTACACATCCAGGCTCTCCAGCAGCTCCTCTTCTTGTTCTGAGGCTGCCGCCAGGCGCCCACGGGCTGCCACGTAGTCGGAGTTGTAGAAGCAGGCCTCGCTGGCTGCCTGGCGATCAAAGCGGCCAGTGTCACGGCCCAGCTCTGGGGGCCCAGG----CCCTTGTGGTGG----------------------GGCCACAGCTGGGTGGAAGGCTTGGAAATGCATGGGAAAGAAGGCCTGCCAGCCGGAGATGGCATGCATGCGGCAGCGGTTCAGGAAGTCAGGCGTGAGCACCGTGTCTGGCCCGGCCAGCAGGAACAGTGTGTCCAGCGGGTGCTTCTTGGAGAGTAGATCCATGAGGCGCAGTGGTGAGGGTGCGGCTGTCTGCACACTGAGCCATGGCACCCGGGCACCGGGGAAACGCCGCTCCAGCTCTGCCACGTGGGCCTTGACAGGTGCGAAGACATCTGCGTGGGCCGCGCGCTGGGCCTGGCGCGGCTCATACAGTAGCAGCAGGGTCAGGGCTGCCGCAGCATCACCAGGCTCCAGTGCTGCAGTGGCAAAGGCCTCCAAGAAGCCAGGGGCCAGGTCACGCTCAGCCGCAGCTAGAGGCAGCAGCACAGTGAGACGTGAGGCCTCAGTGACATAGGGCACAGGCAAGATCTCCACGCGGCTCAGTGGCCGGAGCAGCTGCACTCGGCGAGTGAGGGGCCGGCGGCCTCCCTGGGGGGTCAGTGCCTCCAGCTGCAAGTCTAGCATGTATTCCATACCCCGGGCCGGATCAAAGCGTCGGTAGCCATTCACCAGCTGCTGCTTCTGGAGCCGCAAGGCCGGGTGGTAGCGGCGGTTGAGCTCCTCTAGAGCTGTCCCCAGAACATCGGCCACATCAGCCCGGTCAGCCCCACGCAGTGGGCAGCGGGGTGAGCCATCGGCGCAAGAGAAAGCGTGCTGCTCCGTGAAGTAGTCCCAGCGCAGCACCTCAAAGCGGGAGGCCGGGCGGGATGGTGCTGGAATGCCCACGGGCCAAGCAGCTGCCCGGTCCCCATCAACGGCCAGACGGCTGGTATTCTGGATCTCCCA
851s mm5.chr1       75920526 1255 + 195203927 AGGTGCTGTTCCCCTGTTCCTGCTCAAAGAGCAGCATGGCAAGCTGGGTGCGGGAGCCAAGGCCCTCAAGTACGCTCTGGCGACAGCGGTGGTAAAGGTCTTCACTGAGCCGTGCACTGCACGGCTGGGCCCGGTAGCGCTGCAGCAAGGCTGGCTCTACTGCTCTCAGCACGTGCAAGTTGGAGAAGCGCAGAAACAACTCGTACACATCCAGGCTCTCCAGCAGCTCCTCCTCCTGCTCCGAGGCCGCCACCAGCCGGCCACGGGCCGCCACATAGTCGGAGTTGTAGAAGCATGCCTCACTGGCAGCCTGGCGATCAAAGTGACCGGTGTCACGGCCCAGCTCTGGTGGCCCAGG----GCCCTGAGGTGG----------------------AGCCACAGCAGGGTGGAAGGCCTGGAAGTGCATGGGGAAGAAGGCCTGCCAGCCAGAGATGGCATGCATGCGGCAGCGGTTCAGGAAATCAGGTGTGAGTACCGTGTCTGGCCCGGCCAGCAGGAACAGAGTGTCTAGTGGGTGCTTCTTGGACAGCAGATCCATGAGACGCAGTGGAGAGGGCGCTGCTGTCTGCACACTGAGCCAGGGCACCCGGGCACCAGGGAAACGCCGCTCTAGCTCTGCCACGTGGGCCTTGACAGGTGCGAAGACGTCTGAGTGGGCTGCCCGCTGGGCCTGGCGTGGCTCATACAGCAGCAGCAGGGTCAAGGCTGCT---GCATCACCAGGTTCCAGGGCTGCAGTGGCAAAGGCTTCTAAGAAGCCAGAAGCCAGGTCTCGTTCCGCTGCAGCCAGCGGCAGTAGCACAGTGAGCCGAGAAGCCTCGGTGACATAGGGTACAGGCAAGATCTCCACTCGGCTCAAGGGCCGAAGGAGCTGCACCCTGCGGGTGAGGGGCCAGCGGCCACCCTGGGGTGTCAGCGCTTCCAGCTGCAGGTCTAGTGTGTACTCCATGCCTCGGGCTGGATCAAAACGCCGGTAGCCGTTCACCAGCTGTTGCTTCTGGAGCTGCAGCGCTGGCTGGTAACGGCGGTTGAGCTCCTCTAAGGCTGTCCCCAGGACGTCAGCCACATCAGCCTGGTCGGCCCCACGCAACGGGCAGCGGGGAGAGCCATCGGCGCAGGAGAACGCGTATTGTTCTGTGAAGTAGTCCCAGCGCAGAACCTCAAAGCGTGAGGCAGGGCGAGACGGTGCTGGGATGCCCACTGGCCAGGCAGAGGCTCTCTCCCCATCAGCAGCCAGTCGGCTGGTATTCTGGATCTCCCA
852s rn3.chr9       74897412 1255 + 113649943 AGGTGCTGTTACCCTGTTCCTGTTCAAAGAGCAGCATGGCAAGCTGGGTGCGGGAGCCAAGGCCCTCAAGCACGCTCTGGCGACAGCGGTGATAAAGGTCCTCGCTGAGCCGAGCGCTGCATGGCTGGGCCCGGTAGCGCTGCAGCAAGGCTGGTTCCACTGCCCTCAGCACATGCAAGCTAGAGAAGCGTAGAAACAACTCATACACATCCAGGCTCTCCAGCAGCTCCTCCTCCTGCTCGGAGACTGCCACCAGCCGTCCACGGGCCGCCACATAGTCGGAGTTGTAGAAGCATGCCTCGCTGGCAGCCTGACGATCAAAGTGGCCGGTGTCACGGCCCAGTTCTGGTGGCCCAGG----GCCCTGAGGTGG----------------------AGCCACAGCAGGGTGGAAGGCCTGGAAGTGCATGGGAAAGAAGGCTTGCCAGCCCGAGATGGCGTGCATGCGGCAGCGGTTCAGGAAGTCGGGTGTGAGCACTGTGTCTGGCCCGGCCAGCAGGAACAGAGTGTCCAGCGGGTGCTTCTTGGAGAGTAGATCCATGAGGCGCAGCGGAGAGGGCGCGGATGTCTGTACACTGAGCCAGGGCACTCGGGCACCAGGGAAACGCCGCTCTAGCTCGGCCACGTGGGCTTTGACGGGTGCGAAGACATCTGCGTGGGCTGCCCGCTGGGCCTGGCGTGGCTCATACAGCAGCAGCAGGGTCAAGGCTGCG---GCATCGCCAGGTTCCAGTGCTGCAGTGGCAAAGGCTTCTAGGAAGCCAGATGCCAGGTCACACTCTGCTGCAGCCAGAGGCAGCAGCACAGTGACCCGAGAAGCCTCGGTGACATAGGGCACAGGCAAGATCTCCACTCGGCTCAAGGGCCGAAGGAGCTGTACCCTGTGGGTGAGGGGCCAGCGGCCACCCTGGGGCGTCAGCGCTTCCAGCTGCAAGTCTAGTGTGTACTCCATACCTCGGGCTGGATCAAAACGCCGGTAGCCATTCACCAGCTGTTGCTTCTGGAGCCGCAGTGCTGGCTGGTAACGGCGGTTGAGCTCCTCTAAGGCTGTTCCTAGGACATCAGCCACATCGGCCTGGTCGGCCCCACGCAGCAGGCAGCGGGGTGAGCCGTCAGCACAGGAGAAAGTGTGCTGTTCCGTGAAGTAGTCCCAGCGCAGAACCTCAAAGCGCGAGGCAGGGCGAGACGGCGCTGGAATGCCCACTGGCCAGGTAGAAGCCCTCTCCCCATCAGCAGCCAGTCTGCTGGTATTCTGGATCTCCCA
853s canFam1.chr37  29028803 1258 +  33897405 AGGTGCTGTTGCCCTGCTCCTGCTCAAAGAGCAGCATGGCCAGCTGGGTGCGGGAGCCCAGGCCCTCCAGCTCGCTCTGGCGGCAGCGGTGGTACAGGTCCTCGCTGAGCCGCGCGCTGCACGCCTGCGCCCGGTAGCGCTGCAGCAGCGCTGGTTCCACGGCGCGCAGCACGTGTAGGCCCGAGAAGCGCAGGAACAGCTCGTACACGTCCGTGCTCTCCAGCAGCTCCTCTTCCTGCTCCGAGGCCGCTGCCAGCCGTCCGCGGGCTGCCACGTAGTCGGAGTTGTAGAAGCAGGCCTCGCTGGCCGCCTGGCGGTCGAAGCGGCCCGTGTCTCGGCCCAGCTccgggggcccggg----gccctggggggg----------------------cgccacggccgggTGGAAGGCCTGGAAGTGCATGGGGAAGAAGGCCTGCCAGCCAGAGATGGCGTGCATGCGGCAGCGGTTCAGGAAGTCGGGCGTGAGCACCGTGTCGGGCCCGGCCAGCAGGAACAGCGTGTCCAGCGGGTGCTTCTTGGAGAGCAGGTCCATGAGGCGCAGCGGCGAGGGTGCAGCTGTCTGCACGCTGAGCCAGGGCACCCGGGCACCCGGGAAACGCCGCTCGAGTTCCGCCACGTGGGCCTTGACAGGCGCAAAGACATCTGCGTGGGCCGCCCGCTGGGCCTGTCGTGGCTCGTACAGGAGCAGCAGGGTCAGGGCTGCAGCCGCGTCACCCGGCTCCAGCGCCGCGGTGGCGAAGGCCTCCAGGAAGCCAGGGGCCAGGTCCCGCTCGGCCGCAGCCAGAGGCAGCAACACGGTGAGACGCGACGCCTCGGTGACGTAGGGCACAGGCAGGATCTCCACGCGGCTCAGGGGCCGCAGCAGCTGCACCCGGCGGGTGAGGGGCCGGCGGCCGCCCTGCGGGGTCAGCACCTCCAGCTGCAGGTCCAGCGTGTACTCCATGCCGCGGGCAGGATCGAAGCGCCGGTAGCCGTTGACCAGCTGCTGCTTCTCGAGCCGCAGGGCCGGGTGGTAGCGGCGGTTGAGCTCTTCCAGGGCGGCACCCAGCACGTCGGCCACGTCGGCCCGGTCGGCCCCTCGCAGCGGGCAGCGGGGCGAGCCGTCGGCGCAGGAGAAGGCGTGCTGCTCTGTGAAATAGTCCCAGCGCAGCACCTCGAAGCGAGAGGCCGGGCGGGATGGTGCGGGAATGCCCACGGGCCAGGCGGCCGCCCGCTCGCCGTCAGCTGCCAGGTGGCTGGTGTTCTGGATCTCCCA
854s galGal2.chr7   14430361 1258 -  37338262 AGGTGCTGTTCCCCTGCTCCTGCTCAAAGAGCACCATGGCCAACTGGGAGCGGGACCCAACGCCCTCCAGGCTGCTCTGCACGCAGCGGTGGTAGATCTCCTCACTGAGCCGCGGGTTGCAGGCCTGGTGCCGGTAGTGCTGCAGCAGGGCGGGCTCCACGGCCCGGAAGACGTGAAGGTTGGAGTACTTGATGAACATATCGTAGATGTCCAGGGTCTCCAGGATGTCCTCATTCTCCTGCACGTCACCCGCCATGCGGGTGCGTGCTGCCATGTAGTCAGCATTGTAGAAGCAGGCCTCATGGAAGACATCGCGGTCAAAGCGCCCTGCATCCCGCAGGAGGTCCAGTGTGGCAGGCGGTGCCTGGTTGTGG--------------------TAGGCGACGGCGGGGTTGTAGCCCTGGAAGTGGATGGGGAAGAAGACCTGCCAGTTGTTGATGGTGTTCATCCGGCAGCGGTTCAGGAAGTCGACGGTGACCTCTGTGCCCACACCGGCCACAAAGAACAGCGTGTCCACGGGATGCTTCTTGGAGATGATGTCCATGACCTTGATTTGGGAGGGGGCATCTGTCTTCACGCTGATCCACGGGATCTTCACCTCGGCATACTTGCGCTCATACTCTGTGATCTGGGCCTTCACAGGGGCAAAGATGTCGTTCTGGGTCACCTGCTGGGCCTCGAATGGATCGTAGATGAACAGGAAGGTGAGCACCGCG---TTCTCGCTGCTCTCAAAGGCAGCTGCCGCATAGGCCTCCAGGAAGCGTGCGGCATGGTCCCGTTCGTGGGCAGTGAGCGGCAAGATGACGTTGATGCGGCTGGCCTCCGTCACATAGGGCATAGGGATGATCTCCACCTCGCTGAGGGGCCGCACCAGGTGCACGCGCTTGGTGACAGAGCGGCTGTGACCCTTCTGCGTGACCACCTCCACCTGCAGGTCCAGCGTGTACTCCATGCCGCGCGTAGGGTCAAAGCGCCGGTAGCCATTCACCAGCTGCTGCTTGCGGACATGCAGCACCGGCTGGTACTTGCGGTTCAGCTCCTCCATGGCTGTGGCCACCACGTCAGCCACATCAGCTAGGTCTGCGCCCTGCAGCTCGCATTTGGGGGAGCCATCCACGCAGGCATAGACCTGATCCTCTGTGAAGTAGTCCCAGCGCAGCACCTCGAAGCGAGTTTTGGGCTGGAATGGAGGAGGGATGCCGACAGGCCACGCGGCACTGTGGTCCCCATCTGCAGACAGGCTGCTGGCATTCTGGATCTC---
855s fr1.chrUn       3409912 1273 + 349519338 AAGTGCTGTTGGCCTGCTCCTGCTCAAAGAGCGCCATGGCCAGGTGGGAGCGCGAGCCCAGCCCCTGTAGGTTACTGAGGACGCAGCGGTGGTAGACGTCCTCGCTGAAGCGGGGGTTGCAGGTCCGTCTCACGTACTTCTGGATCAGAGCCGGCTCCACGGCCCTGAAGACGTGCAGCCCCGAGTACCGCACAAATATGTCGTACACGTCCATGCTCTCCAGGAGCTCCTCGTTGTCCAAGAGGTCGGCCGCCATCTTGGTCCTCGCCGTCATGTAGTCGGCGTTGTAGAAGCAGGCCTCGTCAAACACGTGGCGGTCGAAGCGGCC---GTCCCGCAGCGACTC-GGAGGCGAAGG----CGGACGAGGCGGCCGAGGGCTGCTGGTCCCGGTACATGACGGCGGGGCTGAACTCCTGGAAGTGGATGGGGAAGAACACCTGCCAGTTGCTGATGGTGTTCATCCTGCAGCGGTTCAGGAAGTCGGCGTTGACCTCCGTCCACACGCTCGCCAGGAAGAAAAGCGTGTCCACCGGGTGCTTCTTGGAGATGATGTCCATCAGCTTGACCTGCGAGGGCACCTCCGTCTTCACGCTGATCCAGGGGATCTTCACGTCCCCGTAGCGCTTCTCCACCTCTCCGATCATGGCCTTGATGCCCGCGAACACGTCGGCCTGACTGACGCGCTGCGCGTCGAACGGGTCGTAGATGAACAGGAACGTGAGCAGGACG---TTGTCGCGGGCGTCCAAGGTGTTCATCACGTACATATCCAGGAAGTTGCCGACAAAGTCCTGGTCCTGGGCGGTGACGGGGAGGATGACCTGCACCCGGGTGGCCTCCGTCACGTACGGCATGGGGATGATCTCCACGGCGCTCAGAGGGCGCAGCAGGTTCACGCGCTTGGCGATGACTTGGCTGTGGTCCTTCTGGGTGTACGCCTCCAGCGCCAGGTCCAGCACGTACTCCATGCCGCGGGTGGGGTCGAAGCGCCTGTAACCGTTGAGCAGACGCCGCTTGGTGAAGCGGAGCTGCGGCTGGTAGCGCTCGTTCAGGCGCTCCACCGCGATCTCCAACACGGCGTCGACGTCCGCGCGGTCGGCGCCTCTCATCTCGCACTTGGGCGAGCCGTCGACGCAGGAGTAGATGTGCTCTTCCGTGAAGTATTCCCAGTTTATCACCTCGAAGCGAGTTCTCGGCTTAAACGGGGAGTTGATGCCGACGGGCCACGTGACTCCGGCTTTGCCCTCGGGCGTCAGCTCGCTCAGGTTGTTGATCTGCGT
856s danRer1.chrUn 144716832 1261 + 367113659 AAGTACTGTTGCCCTGTTCCTGTTCAAACAGCAGCATGGCGAGCTGAGAGCGTGATCCAAGGCTATCCAGGGTGCTTTGTACACACCTCTGGTAGATTTCTTCACTAAGGCGAGGATTACACGTTTGGTAGCTGTATTTCTGATGCAGGGCCGGCTCCACTGCTCGGAAAACATGGAGGCCAGAGTATTTGACGAACATGTCATAGATATCAAGGTTCTCCAGGATCTCCTCATTCTCCAGCACATCCGATGACATCCGGGTACGGGTCGCCATGTAGTCCGAGTTGTAGAAGCAAGCTTCGGTGAAGGAGCTGCGATCGAAAAGACCAGCCTCTTTGACCAAATCCAACGCACTGGGAAGAGGCTGGTTGTGA--------------------TAAGCGATGTCAGGATTGTAGTACTGGAAGTGGATTGGAAAGAACACCTGCCAGTTGTTGATGGAGTTCATCCGACAGCGATTGAGGAACTCTGAACTGATGCTTGTTTTTACCGTCGCAATGAAGAACAACGTGTCAACCGGGTGCTTCTTGGAGATGATGTCCATGAATTTGATTTGAGACGGACTTTCGCTTTTAACACTAATCCAGGGGATTTTGACTGCAGGATATCGATGTTCGTACGTACTGATTTGTGCTTTGATGCTGGAGAAGATGTCATTCTGGTTGACTTGTTGGGCCTCTATTGGATCGTAGATGAAGAGGAACGTCAAGATCGCA---TTCTCGCTGGTTTCGAATGCATTTGTGGCATACACTTCTAAAAACTGATGAACGTAATCTCGATCTTGAAGAGTAACGGGTAAGATGATATGAACTCTAGTTGCTTCTGTAACGTAAGGCATAGGGATGATCTCGATGCGACTGAGAGGTCTTACTAAGTGGACCCTCTTGGTAATAGAGCGACTGTGTCCTTTTTGGTTAACTACCTCCAATTGTAGGTCCAGGGTGTACTCCATACCTCTGGTGGGGTCAAAACGTCTGTATCCATTGATTAGCTGTTGCTTCTTTAGGTACAACACAGGCTTGTACTTTTTATTCAGTTCACCCATTGCTGTCTCAATGACATCGGCTACGTCTAGCTTGTCAACTCCACGAAGCTCGCATTTCGGAGAGCCATCGATGCAAGAGTAAACCTGATCCTCAGTGAAGTAATCCCACCGCAGGACCTCGAATCGTGTTTTGGGCTCAAAGGGTGGATTGATTCCAACTGGCCACAAAGCACTGCGGTTGCCCTCAAAAGCCACTACACTGACATTTCTAATTTCCGC
857
858a score=133281.0
859s hg17.chr20     33330413 10 +  62435964 TCAGGTGAGG
860s panTro1.chr21  35343723 10 +  65473740 TCAGGTGAGG
861s mm5.chr2      155883450 10 + 181686250 TCATGTGAGG
862s rn3.chr14      87484150 10 + 112220682 TCATGTGAGT
863s canFam1.chr24  27188710 10 +  50732077 TCAGGTGAGG
864
865a score=135043.0
866s hg17.chr20     33513606 186 +  62435964 ATGGAGACAAGAAGCCCTG---GGTTGAACAACATGAAGCCCCAGTCACTGCAGCT---GGTACTGGAAGAGCAGGTGCTGGCACTACAGCAGCAGATGGCAGAGAATCAGGCAGCCTCCTGGCGGAAGCTGAAGAACTCCCAGGAGGCCCAGCAGAGACAAGCAACCCTTGTGAGGAAGCTGCAGGCCAAG
867s panTro1.chr21  35533536 186 +  65473740 ATGGAGACAAGAAGCCCTG---GGTTGAACAACATGAAGCCCCAGTCACTGCAGCT---GGTACTGGAAGAGCAGGTGCTGGCACTACAGCAGCAGATGGCAGAGAATCAGGCAGCCTCCTGGCGGAAGCTGAAGAACTCCCAGGAGGCCCAGCAGAGACAAGCAACCCTTGTGAGGAAGCTGCAGGCCAAG
868s mm5.chr2      156025320 183 + 181686250 ATGGAGACAGGGAGCCCCG---GGTTG---AACATGAAGCCCCAGTCCTTGCAGCT---GGTGCTGGAGGGGCAGGTGCTGGCGCTGCAGCAGCAGATGGCCGAGAATCAGGCTGCCTCCTGGCGGAAACTGAAGAACTCCCAAGAGGCCCAGAAGAGACAAGCAACCCTCGTGAGGAAGCTGCAGGCCAAG
869s rn3.chr5       13191474 192 - 173106704 CTGCAGCTGGAGCAGGCTGTGCGGCTGGAGACTGGGGAGCTGGAGGCACAGGAGCCCCGGGGTCTGGTGCGGCAGAGCGTGGAGCTGAGGAGGCAGCTGCAGGAGGAGCAGGCCTCCTACCGGCGCAAGCTACAGGCCTACCAGGAGGGCCAGCAGCGGCAGGCCCAGCTAGTGCAGCGGCTGCAGGCCAAG
870s canFam1.chr24  27350813 186 +  50732077 ATGGAGACGCGAGGCCCTG---GGTTGAACAATATGAAGCCCCAGTCACTGCAGTT---GGTGCTGGAGGAGCAAGTACTAGCACTACAGCAGCAGATGGCAGAGAACCAAGCAGCCTCCTGGCGGAAGCTGAAGAACTCCCAGGAGGCCCAGCAGAGGCAAGCAACCCTCGTGAGGAAGCTGCAGGCCAAG
871
872a score=79158.0
873s hg17.chr20     33579500 27 +  62435964 CTAGGGAACCAGACCATCTTCCAAAAT
874s panTro1.chr21  35599874 27 +  65473740 CTAGGGAACCAGACCATCTTCCAAAAT
875s mm5.chr2      156065808 27 + 181686250 CTAGGGAATCAGACCATCTTCCAAAAT
876s rn3.chr3      146317055 26 + 170969371 CTAGGGAATCAGA-CGTCTTCCAAAAT
877s canFam1.chr24  27411797 27 +  50732077 CGAGGGCACTGGACCACCCTCCAAAAT
878
879a score=183752.0
880s hg17.chr20     33593260 88 +  62435964 ATGGAGGCGCTGGGGAAGCTGAAGCAGTTCGATGCCTACCCCAAGACTTTGGAGGACTTCCGGGTCAAGACCTGCGGGGGCGCCACCG
881s panTro1.chr21  35611606 88 +  65473740 ATGGAGGCGCTGGGGAAGCTGAAGCAGTTCGATGCCTACCCCAAGACTTTGGAGGACTTCCGGGTCAAGACCTGCGGGGGCGCCACCG
882s mm5.chr2      156071489 88 + 181686250 ATGGAGGCGCTGGGGAAGCTGAAGCAGTTCGATGCCTACCCTAAGACTCTGGAGGACTTCCGGGTCAAGACCTGCGGGGGTGCCACGG
883s rn3.chr3      146322266 88 + 170969371 ATGGAGGCGCTGGGGAAGCTGAAGCAGTTCGATGCCTACCCTAAGACTCTGGAGGACTTCCGGGTCAAGACCTGCGGGGGCGCCACGG
884s canFam1.chr24  27422888 88 +  50732077 ATGGAGGCGCTGGGGAAGCTCAAGCAGTTCGATGCCTACCCCAAGACTCTGGAGGACTTCCGGGTCAAGACCTGCGGGGGCGCCACGG
885s fr1.chrUn      60145707 88 - 349519338 ATGGATACTTTTAGCAAACTGAAACAGTTTGACGCTTATCCCAAAACTCTGGAGGATTTTAGGGTGAAGACATGGGGCGGTGCGACCG
886s danRer1.chr20  18851405 88 +  31913010 ATGGATGCGTTAAATAAACTCAAACAATTTGACGCGTATCCGAAAACTCTAGAGGACTTCAGGATCAAAACATGTGGAGGAGCCACGG
887
888a score=802859.0
889s hg17.chr21    32707032 160 + 46944323 ATGCTTCTGCCGGGACGCGCACGCCAACCGCCGACGCCCCAGCCCGTGCAGCATCCCGGCCTCCGCCGGCAGGTAGAGCCGCCGGGGCAGCTCCTGCGCCTCTTCTACTGCACTGTCCTGGTCTGCTCCAAAGAGATCTCAGCGCTCACCGACTTCTCTG
890s panTro1.chr22 32678009 160 + 47338174 ATGCTTCTGCCGGGACCCGCACGCCAACCGCCGACGCCCCAGCCCGTGCAGCATCCCGGCCTCCGCCGGCAGGTAGAGCCGCCGGGGCAGCTCCTGCGCCTCTTCTACTGCACTGTCCTGGTCTGCTCCAAAGAGATCTCAGCGCTCACCGACTTCTCTG
891s mm5.chr16     91265497 160 + 98801893 ATGCTCCTGCCAGGACACCCGCGTCCACCACCCGCGCCCCAATCGGCGCAGAATCAGGGCCTCCGCAGGCAGGTAGAGCCTCCGGGGCAGCTTCTGCGCCTGTTCTACTGCACGGTCCTAGTGTGCTCCAAAGAGACCTCCGCGCTCACCGATTTCTCTG
892s rn3.chr11     30818860 160 + 87800381 ATGGTCTTGCCCGGACACCCGCGTCTGCCGCCCGGGCCACAGCCACCGCAGAATCCCGGCCTCCGCAGGCAGGTAGAGCCTCCAGGGCAGCTTCTGCGCCTCTTCTACTGCACGGTCCTAGTGTGCTCCAAAGAGACCTCCGCGCTCACCGATTTTTCCG
893s canFam1.chr31 30192155 160 + 41215879 ATGCTTCTGCCTGGACAcgcgcgcccgccgcccgcgccgcagcccgcgcAGCATCCCGGACTCCGCCGGCAGGTAGAGCCTCCCGGGCAGCTCCTGCGCCTCTTCTACTGCACCGTCCTGGTCTGTTCCAAGGAGATCGCGGCGCTCACGGACTTCTCCG
894
895a score=93692.0
896s hg17.chr21    32869641 381 + 46944323 TCAGATTCGGCCCTGAAGGGCCACGCAGACCTCGGCCAAGGATGGGAAGGAGTCCAGGTGCCAGGCAGCCCAGGGCGAGTGGTGCCCACAGGCTTGGGCTGTGCTGTGCATAAGGGCCACACCTGAAGCTCGGCCACACCTGAGGCTCGGCCACCACATAGGCCCCGTTTCTTTACCAAGATAGGTTCCTGCAGAGGTCGTGAAGCTGCTGTGGTCATTTGCTGGCAGCGACGTGAAGATAGAATTCTTTCCTGACTCAACCAGGGGCACTCTCGTCTCCTCCCCGTGAGACCCGCAATGCAGGAAGCACCCACAGCTGCATGGACAGAACTGGGGCCTGGGAAAGAGGCCAGGAAGGTGCCAGATGAGAGGGCGCTCCAT
897s panTro1.chr22 32842524 381 + 47338174 TCAGATTCGGCCCTGAAGGGCTACGCAGACCTCGGCCAAGGATGGGAAGGAGTCCAGGTGCCAGGCAGCCCAGGGCGAGTGGTGCCCACAGGCTTGGGCTGTGCTGTGCATAAGGGCCACACCTGAAGCTCGGCCACACCTGAGGCTCAGCCACCAGATAGGCTCTGTTTCTTTACCGAGATAGGTTCCTGCAGAGGTCGTGAAGCTGCTGTGGTCATTTGCTGGCAGCGACGTGAAGATAGAATTCTTTCCTGACTCAACCAGGGGCACTCTTGGCTCCTCCCCGTGAGACCCGCAATGCAGGAAGCACCCACAGCTGCATGGACAGAACTGGGGCTTGGGAAAGAGGCCAGGCAGGTGCCAGATGAGAGGGCGCTCCAT
898
899a score=62310.0
900s hg17.chr21     33321040 51 +  46944323 ATGGACTCGGACGCCAGCCTGGTGTCCAGCCGCCCGTCGTCGCCAGAGCCC
901s panTro1.chr22  33286911 51 +  47338174 ATGGACTCGGACGCCAGCCTGGTGTCCAGCCGCCCGTCGTCGCCAGAGCCC
902s mm5.chr16      91660624 51 +  98801893 ATGGACTCGGACGCCAGCCTGGTGTCTAGTCGCCCATCGTCCCCAGAACCC
903s rn3.chr11      31244293 51 +  87800381 ATGGACTCGGACGCCAGCCTGGTGTCTAGTCGCCCGTCGTCGCCAGAACCC
904s canFam1.chr31  30690225 51 +  41215879 ATGGACTCGGACGCCAGCCTGGTGTCCAGTCGCCCGTCGTCACCAGAGCCC
905s galGal2.chr3   53622667 51 + 108638738 ATGAATTCTGACTCCAGCTCCGTCTCCAGCAGAGCCTCCTCGCCGGACATG
906s fr1.chrUn     314816718 51 - 349519338 ATGGACTCAGATACGAGCCGCATGTCGAGCAGACCCTCCTCCCCCGAGGTG
907
908a score=19085.0
909s hg17.chr21     33321091 26 +  46944323 GATGACCTTTTTCTGCCGG----------------------------CCCGGAG
910s panTro1.chr22  33286962 26 +  47338174 GATGACCTTTTTCTGCCGG----------------------------CCCGGAG
911s mm5.chr16      91660675 26 +  98801893 GATGATCTTTTTCTGCCCG----------------------------CCCGGAG
912s rn3.chr11      31244344 26 +  87800381 GATGATCTTTTTCTGCCGG----------------------------CCCGGAG
913s canFam1.chr31  30690276 26 +  41215879 GATGACCTGTTTCTGCCGG----------------------------CCCGGAG
914s galGal2.chr3   53622718 54 + 108638738 GACGAGATGTACCTGCGGGAGcaccgccaccaccaccaccaccaccaccCGGAG
915s fr1.chrUn     314816769 22 - 349519338 GACGACATCTTCATGTCCA----------------------------GCC----
916s danRer1.chr24  18057443 31 +  23152154 CATCAGCTGTTTCGAGCAA-----------------------AACGACCCGGAC
917
918a score=-194.0
919s hg17.chr21     33321117 3 +  46944323 TAA
920s panTro1.chr22  33286988 3 +  47338174 TAA
921s mm5.chr16      91660701 3 +  98801893 CAA
922s rn3.chr11      31244370 3 +  87800381 CAA
923s canFam1.chr31  30690302 3 +  41215879 CAA
924s fr1.chrUn     314816791 3 - 349519338 TGA
925s danRer1.chr24  18057475 2 +  23152154 CG-
926
927a score=36.0
928s hg17.chr21     33321117 7 +  46944323 TAAGGGC
929s fr1.chrUn     314816791 7 - 349519338 TGAAGAC
930s danRer1.chr24  18057474 7 +  23152154 CCGGTGC
931
932a score=260.0
933s hg17.chr21     33321120 4 +  46944323 GGGC
934s panTro1.chr22  33286991 4 +  47338174 GGGC
935s mm5.chr16      91660704 4 +  98801893 GGGG
936s rn3.chr11      31244373 4 +  87800381 GGGG
937s canFam1.chr1   91988693 4 - 124897793 catc
938s fr1.chrUn     314816794 4 - 349519338 AGAC
939s danRer1.chr24  18057477 4 +  23152154 GTGC
940
941a score=24176.0
942s hg17.chr21     33321124 110 +  46944323 AGCAGCGGCAGCGCCTTCACTGGGGGCACCGTGTC--------CTCGTCCACCCCGAGTGACTGCCCGCCGGAGCT----GAGCGCCGAGCTGCGCG-GCGCTATGGGCTCTGCGGGCGCGCA
943s panTro1.chr22  33286995 110 +  47338174 AGCAGCGGCAGCGCCTTCACTGGGGGCACCGTGTC--------CTCGTCCACCCCGAGCGACTGCCCGCCGGAGCT----GAGCGCCGAGCTGCGCG-GCGCTATGGGCTCTGCGGGCGCGCA
944s mm5.chr16      91660708 110 +  98801893 GGAAGCAGCAGCGGCTTCACAGGAGGGACTGTGTC--------CTCGTCCACGCCGAGCGACTGCCCGCCAGAGCT----GAGCTCCGAGCTACGAG-GGGCCATGGGCGCGTCAGGCGCGCA
945s rn3.chr11      31244377 110 +  87800381 GGAAGCAGCAGCGGCTTCACAGGAGGAACCGTGTC--------CTCATCCACGCCGAGCGACTGCCCGCCAGAGCT----GAGCTCCGAGCTGCGAG-GAGCCATGGGCACGGCGGGCGCGCA
946s canFam1.chr1   91988697  97 - 124897793 accaccgccaccaccaccaccaGGAGAGCCGTCTCAACTCGGTCTCCTCCACTCAGGGCGACATGGTGCAGAAGAT----GCCCGGGGAG---------------AGTCTCT-------CGCG
947s galGal2.chr3   53622772  75 + 108638738 ---------AGCCGCCTCA--------ACCCCGT---------CTCTTCCACGCAGGGCGACCTGGTGCAGAAGAT----GGCCGGGGAG---------------GGCCTGGCCCGGGGC---
948s fr1.chrUn     314816798  83 - 349519338 --ATCCGTGCACGGCTTCTCCGGA---ACCGTGTC--------C---TCCACGCAGAGCGACTCCCCGCCGGACAT-------CGGGAGCCTGCGC---------GGCCTCTCCG--------
949s danRer1.chr24  18057481  91 +  23152154 AGCCCGGGGGGCG-----AGCGGGCACGCTGGGTC---------------------------TGCCGACCGGATCTTTGTGTGTGAAATACGGCGAGAGCGCCAACAGGACTTCAGGCGCGGA
950
951a score=6480.0
952s hg17.chr21     33321234 22 +  46944323 TCCTGGGGACAAGCTAGGAGGC
953s panTro1.chr22  33287105 22 +  47338174 TCCTGGGGACAAGCTAGGAGGC
954s mm5.chr16      91660818 22 +  98801893 TCCCGGGGACAAACTGGGCGGC
955s rn3.chr11      31244487 22 +  87800381 TCCCGGGGACAAACTGGGCGGC
956s canFam1.chr1   91988794 22 - 124897793 GGCCGGCGCCAAGGCCACGGGC
957s galGal2.chr3   53622847 18 + 108638738 ----GGCCCCAAGGCGCAGGGG
958s fr1.chrUn     314816881 12 - 349519338 --CCACTGACGAGG--------
959
960a score=215890.0
961s hg17.chr21     33321256 192 +  46944323 AGTGGCTTCAAGTCATCCTCGTCCAGCACCTCGTCGTCTACGTCG-TCGGCGGCTGCGTCGTCCACCAAGAAGGACAAGAAGCAAATGACAGAGCCGGAGCTGCAGCAGCTGCGTCTCAAGATCAACAGCCGCGAGCGCAAGCGCATGCACGACCTCAACATCGCCATGGATGGCCTCCGCGAGGTCATGCCG
962s panTro1.chr22  33287127 192 +  47338174 AGTGGCTTCAAGTCATCCTCGTCCAGCACCTCGTCGTCTACGTCG-TCGGCGGCTGCGTCGTCCACCAAGAAGGACAAGAAGCAAATGACAGAGCCGGAGCTGCAGCAGCTGCGTCTCAAGATCAACAGCCGCGAGCGCAAGCGCATGCACGACCTCAACATCGCCATGGATGGCCTGCGCGAGGTCATGCCG
963s mm5.chr16      91660840 192 +  98801893 GGTGGCTTCAAGTCATCTTCCTCCAGCACCTCCTCGTCCACGTCC-TCGGCGGCCACGTCTTCCACCAAGAAAGACAAGAAGCAGATGACTGAGCCCGAGCTGCAGCAGCTGCGCCTGAAGATCAACAGCCGCGAACGCAAGCGCATGCACGACCTCAACATCGCCATGGACGGCCTGCGGGAGGTCATGCCT
964s rn3.chr11      31244509 192 +  87800381 GGTGGCTTCAAGTCATCTTCCTCCAGCACCTCCTCGTCCACGTCG-TCGGCGGCCACGTCTTCCACCAAGAAAGATAAGAAGCAGATGACTGAGCCCGAGCTGCAGCAGCTGCGCCTGAAGATCAACAGCCGCGAGCGCAAGCGCATGCACGACCTCAACATCGCCATGGACGGCCTGAGGGAGGTCATGCCG
965s canFam1.chr1   91988816 138 - 124897793 GAGAGTAGCAAGT-------------------------------------------------------ACAAAATCAAGAAGCAGCTGTCGGAGCAGGACCTACAGCAATTACGGCTGAAGATCAACGGCCGCGAGCGCAAGCGGATGCACGACCTCAACCTAGCCATGGACGGGCTGCGCGAGGTCATGCCC
966s galGal2.chr3   53622865 138 + 108638738 GAGGGCGGCAAGT-------------------------------------------------------ACAAGATCAAGAAGCAGCTCTCGGAGCAGGACCTGCAGCAGCTGCGGCTCAAGATCAACGGGCGGGAGCGCAAGCGGATGCACGACCTCAACCTGGCCATGGACGGGCTGCGGGAGGTGATGCCC
967s fr1.chrUn     314816893 149 - 349519338 ------------------------AGTCCCTCGCCATCCG--------------------GCTCGCAAAGAAAGATCGGAAAGTGCTTTCGGACAACGAACTGCAGACGATCCGCCTCAAAATCAACAGCCGCGAGAGGAAAAGGATGCACGACCTCAACGTGGCCATGGACGGACTCCGGGAAGTCATGCCC
968s danRer1.chr25  10119771 182 -  17189730 AGCTGCTGCAGAAGATGGCCAGCGAGCACCTC----TCCAAGACGCCCAGCGGCAGCAAGT-------ACAAGCTGAAGAAGCAGGTGACCGAGCATGAGATCCAGCAGCTGCGGCTCAAGATCAACGGGAGGGAGCGCAAGCGCATGCACGACCTGAATTTGGCGATGGACGGGCTCCGAGAGGTCATGCCG
969
970a score=323301.0
971s hg17.chr21     33321448 176 +  46944323 TACGCACACGGCCCTTCGGTGCGCAAGCTTTCCAAGATCGCCACGCTGCTGCTGGCGCGCAACTACATCCTCATGCTCACCAACTCGCTGGAGGAGATGAAGCGACTGGTGAGCGAGATCTACGGGGG------------C------CACCACGCTGGCTTCCACCCGTCGGCCTGCGGCGGCCTGGCGCACTC
972s panTro1.chr22  33287319 176 +  47338174 TACGCACACGGCCCTTCGGTGCGCAAGCTTTCCAAGATCGCCACGCTGCTGCTGGCGCGCAACTACATCCTCATGCTCACCAACTCGCTGGAGGAGATGAAGCGACTGGTGAGCGAGATCTACGGGGG------------C------CACCACGCTGGCTTCCACCCGTCGGCCTGCGGCGGCCTGGCGCACTC
973s mm5.chr16      91661032 176 +  98801893 TACGCGCACGGGCCGTCGGTGCGCAAGCTCTCCAAGATCGCCACGCTGCTGCTGGCGCGAAACTACATCCTCATGCTCACCAACTCGCTGGAGGAGATGAAGCGACTGGTGAGCGAGATCTACGGGGG------------T------CACCACGCCGGCTTCCACCCATCGGCCTGTGGCGGGCTGGCACACTC
974s rn3.chr11      31244701 176 +  87800381 TACGCGCACGGCCCGTCGGTGCGCAAGCTCTCCAAGATCGCCACGCTGCTGCTGGCGCGAAACTACATCCTGATGCTCACCAACTCGCTGGAGGAGATGAAGAGACTGGTGAGCGAGATTTACGGGGG------------T------CACCACGCCGGCTTCCACCCGTCGGCCTGTGGCGGGCTGGCACACTC
975s canFam1.chr1   91988954 167 - 124897793 TACGCGCACGGGCCCTCGGTGCGCAAGCTCTCCAAGATCGCCACTCTCCTGCTGGCCAGAAACTACATCCTCATGCTCACCAGCTCCCTGGAGGAGATGAAGAGGTTGGTTGGCGAGATCTACGGGGG------------C------CACCACTCTGCCTTCCA---------CTGCGGGACCGTGGGCCACTC
976s galGal2.chr3   53623003 167 + 108638738 TACGCGCACGGCCCCTCCGTCCGGAAACTCTCCAAAATCGCCACCCTGCTGCTGGCCAGAAACTACATCCTGATGCTCACCAGCTCCCTGGAGGAGATGAAGCGCCTGGTGGGGGAGATCTACGGTGG------------C------CACCACTCGGCCTTCCA---------CTGCGGCACCGTGGGCCACTc
977s fr1.chrUn     314817042 182 - 349519338 TACGCGCACGGACCGTCGGTGCGCAAACTCTCCAAAATCGCCACGCTGCTCCTGGCGAGAAATTACATCCTGATGCTGAGCAACTCGCTGGAAGAGATGAAGCGGCTGGTGAGCGAGATCTACGGCAG------------CGGCGCACACCACGGTGGCTTCCACCCGACAGCTTGTGGGACAATGACACACGC
978s danRer1.chrNA 310476113 188 - 390413307 TACGCTCACGGGCCGTCTGTGCGCAAGCTCTCTAAAATAGCCACTCTGCTGCTCGCGCGCAACTACATCCTTATGCTGAGCAACTCGCTGGAGGAGATGAAGCGGCTCGTGAGCGAGATCTACGGCGGAGGGAGCGGGGCC------CATCACGCCGGTTTCCATCCGTCCAGTTGTGGCACTCTTACGCACGC
979
980a score=23510.0
981s hg17.chr21     33321624 71 +  46944323 CGCGCCCCTGCCC-GCCGC-----------CACCGCGCACCCGGCAGCAGCAG-CGCACGCCGCACATCACCCCGCGGTGCACC
982s panTro1.chr22  33287495 71 +  47338174 TGCGCCCCTGCCC-GCCGC-----------CACCGCGCACCCGGCAGCAGCAG-CGCACGCCGCACATCACCCCGCGGTGCACC
983s mm5.chr16      91661208 71 +  98801893 GGCGCCTCTACCC-ACCGC-----------CACGGCGCACCCCGCGGCCGCCG-CGCACGCCGCGCACCACCCGGCCGTGCACC
984s rn3.chr11      31244877 71 +  87800381 GACGCCTCTACCC-ACCGC-----------CACGGCGCACCCTGCAGCCGCCG-CGCACGCCGCGCACCACCCGGCGGTGCATC
985s canFam1.chr1   91989121 45 - 124897793 CGC-----------------------------CGGC-CACCCAGCACACGCCG-CCAACGCCGTGCACC------CGGTGCA--
986s galGal2.chr20   5296387 84 -  13506680 CACGGCCTTGCCCGGCTGCCCCGAGAAATGCACTGCCTTCACAGGAGCCGCCTCCGCGCTCTGCAAACACTGCAGCGACAAGCC
987s fr1.chrUn     314817224 56 - 349519338 GGGGCCCGTGCCGGGACAC-----------CCGAGCACAT--------------CTCACAGCTCACACC---CGGCGGTGCACC
988s danRer1.chrNA 310476301 62 - 390413307 GGCGGCGGCTCC--GTTAC-------------CGGGTCACCCCGCTGCTGTCT-CGCATTCCTCTCACC------CGGTGCACC
989
990a score=9256.0
991s hg17.chr21     33321695  9 +  46944323 A-CCCCATCc
992s panTro1.chr22  33287566 10 +  47338174 AACCCCATCc
993s mm5.chr16      91661279  9 +  98801893 A-CCCCATCC
994s rn3.chr11      31244948  9 +  87800381 A-CCCCATCC
995s canFam1.chr1   91989166  8 - 124897793 --CCCCATCC
996s fr1.chrUn     314817280  9 - 349519338 A-CCCGCTCC
997s danRer1.chrNA 310476363  9 - 390413307 A-TCCTCTGC
998
999a score=14345.0
1000s hg17.chr21    33321704 48 +  46944323 tgccgcccgccgccgcagcggctgctgccgccgctgcagccgcggctg
1001s panTro1.chr22 33287576 48 +  47338174 tgccgcctgccgccgcagcggctgctgccgccgctgcagccgcggctg
1002s mm5.chr16     91661288 48 +  98801893 TCCCTCCCGCAGCCGCCGCCGCCGCCGCAGCCGCCGCCGCCGCAGCGG
1003s rn3.chr11     31244957 48 +  87800381 TCCCTCCAGCAGCCGCGGCCGCAGCCGCCGCAGCCGCTGCCGCAGCGG
1004s canFam1.chr1  91989174 39 - 124897793 TG------GGCGGCGCGCTCTCGTCCGGCAACGCCTC-GTCGCCGC--
1005
1006a score=4230.0
1007s hg17.chr21     33321752 3 +  46944323 TGT
1008s panTro1.chr22  33287624 3 +  47338174 TGT
1009s mm5.chr16      91661336 3 +  98801893 TGT
1010s rn3.chr11      31245005 3 +  87800381 TGT
1011s canFam1.chr1   91989213 3 - 124897793 TGT
1012s fr1.chrUn     314817304 3 - 349519338 TGT
1013
1014a score=2889.0
1015s hg17.chr21     33321755 6 +  46944323 CCAGCG---
1016s panTro1.chr22  33287627 6 +  47338174 CCAGCG---
1017s mm5.chr16      91661339 6 +  98801893 CCAGCG---
1018s rn3.chr11      31245008 6 +  87800381 CCAGCG---
1019s canFam1.chr1   91989216 6 - 124897793 CCGCCG---
1020s fr1.chrUn     314817307 6 - 349519338 CCACGG---
1021s danRer1.chrNA 310476387 9 - 390413307 CCACCGCAG
1022
1023a score=65057.0
1024s hg17.chr21     33321761 77 +  46944323 CCTCTCTGCCCGGATCCGGGCTGCCGTCGGTCGGCTCCATCCGTCCACCGCACGGCCTACTCAAGTCTCCGTCTGCT
1025s panTro1.chr22  33287633 77 +  47338174 CCTCTCTGCCCGGATCCGGGCTGCCGTCGGTCGGCTCCATCCGTCCACCGCACGGCCTACTCAAGTCTCCGTCTGCT
1026s mm5.chr16      91661345 77 +  98801893 CCTCTCTACCGGGCTCCGGGCTGTCCTCGGTCGGATCCATCCGGCCTCCGCACGGCCTGCTCAAGTCACCGTCGGCA
1027s rn3.chr11      31245014 77 +  87800381 CTTCTCTGCCGGGCTCCGGGCTGTCCTCGGTCGGATCCATCCGGCCTCCTCACGGCCTGCTCAAGTCTCCATCGGCA
1028s canFam1.chr1   91989222 60 - 124897793 CCTCGCTGCCGG---------------CCATCGGCACCATTCGACCTCCCCACTCTCTGCTCAAGGCGCCCTCCA--
1029s galGal2.chr3   53623259 74 + 108638738 CGTCGCTGCCAG---CCTCGCTGCCGGCCCTGGGCACCATCCGGCCGCCCCACTCCCTGCTGAAGACCCCCTCCACT
1030s fr1.chrUn     314817313 77 - 349519338 CGTCTCTGTCGGCACCTGGCATCGCCGCCGTCACATCTGTCAGACCTCATCATGGACTCCTCAAAGCTCCCGGTACC
1031s danRer1.chrNA 310476396 68 - 390413307 CATCTCTTTCCGGGACGGGGCTTTCAGCCGTCA---------GGCCGCATCACGGACTCCTCAAAGCCCCGTCAGCC
1032
1033a score=100.0
1034s hg17.chr21     33321838 1 +  46944323 g
1035s danRer1.chrNA 310476464 1 - 390413307 G
1036
1037a score=16973.0
1038s hg17.chr21    33321838 36 +  46944323 gccgcggccgccccgctggggggcgggggcggcggc
1039s panTro1.chr22 33287710 36 +  47338174 GCCGCAgccgccccgctggggggcgggggcggcggc
1040s mm5.chr16     91661422 36 +  98801893 GCCGCAGCCGCCCCTCTCGGAGGCGGGGGTGGAGGC
1041s rn3.chr11     31245091 36 +  87800381 GCCGCGGCCGCCCCTCTCGGAGGCGGGGGTGGAGGC
1042s canFam1.chr1  91989282 15 - 124897793 --CGCCGCCGGCCCT-------------------GC
1043
1044a score=-1380.0
1045s hg17.chr21  33321838 36 +  46944323 gccgcggccgccccgctggggggcgggggcggcggc
1046s fr1.chrUn  314817391  1 - 349519338 G-----------------------------------
1047
1048a score=627.0
1049s hg17.chr21     33321874 1 +  46944323 A
1050s panTro1.chr22  33287746 1 +  47338174 A
1051s mm5.chr16      91661458 1 +  98801893 A
1052s rn3.chr11      31245127 1 +  87800381 A
1053s canFam1.chr1   91989297 1 - 124897793 A
1054s galGal2.chr3   53623346 1 + 108638738 A
1055s fr1.chrUn     314817392 1 - 349519338 T
1056
1057a score=101521.0
1058s hg17.chr21     33321875 67 +  46944323 GTGGGGC----GAGCGGGGGCTTCCAGCACTGGGG---------C---GGCATGCCCTGCCCCTGCAGCATGTGCCAGGTGCC
1059s panTro1.chr22  33287747 67 +  47338174 GTGGGGC----GAGCGGGGGCTTCCAGCACTGGGG---------C---GGCATGCCCTGCCCCTGCAGCATGTGCCAGGTGCC
1060s mm5.chr16      91661459 67 +  98801893 GCGGTGG----CAGCGGTGGCTTCCAGCACTGGGG---------C---GGCATGCCGTGCCCCTGCAGCATGTGCCAGGTGCC
1061s rn3.chr11      31245128 67 +  87800381 GCGGTGG----CAGCGGTGGCTTCCAGCACTGGGG---------T---GGCATGCCGTGCCCCTGCAGCATGTGCCAGGTGCC
1062s canFam1.chr1   91989298 63 - 124897793 GCTGG--------GCAGCGGCTTCCAGCACTGGGC---------C---GGGCTGCCCTGCCCCTGCACCATCTGCCAGATGCC
1063s galGal2.chr3   53623347 63 + 108638738 GCTCG--------GCGGAGGCTTCCAGCACTGGGC---------C---GGCTTGCCGTGCCCCTGCACCATCTGCCAGGTGCC
1064s fr1.chrUn     314817393 80 - 349519338 GCGGGGCCCCTGGGAAGCAGTTTCCAGCACTGGGGTGTGGGCACC---GGGATGCCTTGTCCGTGCAGCATGTGCCAAGTTCC
1065s danRer1.chrNA 310476467 74 - 390413307 GCTGGGCCTCTGGGCGCGGGTTTCCAGCACTGGGG---------TGCGGGGATCCCTTGTCCGTGTAGCATGTGCCAGGTGCC
1066
1067a score=77095.0
1068s hg17.chr21     33321942 70 +  46944323 GCCGCCGCACCACCACGTGTCGGCTATGGGCGCCGGCAGCCTGCCGCGCCTCACCTCCGACGC------------CAAG-TGA
1069s panTro1.chr22  33287814 70 +  47338174 GCCGCCGCACCACCACGTGTCGGCCATGGGCGCCGGCAGCCTGCCGCGCCTCACCTCCGACGC------------CAAG-TGA
1070s mm5.chr16      91661526 70 +  98801893 GCCGCCGCACCACCACGTGTCGGCTATGGGCGCCGGCACCTTGCCGCGCCTCACCTCCGACGC------------CAAG-TGA
1071s rn3.chr11      31245195 70 +  87800381 GCCGCCACACCACCACGTGTCGGCTATGGGCGCCGGCACCTTGCCGCGCCTCACCTCCGACGC------------CAAG-TGA
1072s canFam1.chr31  30691121 70 +  41215879 GCCGCCGCACCCCCACGTGCCGGCCATGGGCGGGGGCAGCCTGCCGCGCCTTGCCTCCGACGC------------CAAG-TGA
1073s galGal2.chr3   53623413 76 + 108638738 CCCGCCGCACCTC------TCTGCCCTCTCCGCCTCCGGCATGGGCCGGATCTCGGCGGACACCAAGGACCTGCTCAAG-TGA
1074s fr1.chrUn     314817473 65 - 349519338 CCCTCCACACGTC------CCGGCCATCAGTACCGTTACCATGTCAAGGCTGTCCAGCGACTC------------CAAGTTGA
1075s danRer1.chrNA 310476541 64 - 390413307 TCCGTCTCACGTT------CCCGGTATGAGCGCCGTCAGCATGCCACGGCTGACCAGTGACTC------------AAAA-TAA
1076
1077a score=113636.0
1078s hg17.chr21    33744994 2 + 46944323 TC
1079s panTro1.chr22 33720891 2 + 47338174 TC
1080s mm5.chr16     92040468 2 + 98801893 TC
1081s rn3.chr11     31574511 2 + 87800381 TC
1082s canFam1.chr31 31078278 2 + 41215879 TC
1083
1084a score=61167.0
1085s hg17.chr21     33744996 44 +  46944323 AGGTCCATAGCTCTTCGGTTCTTCCAAATTTGTAGATCAGAGTG
1086s panTro1.chr22  33720893 44 +  47338174 AGGTCCATAGCTCTTCGGTTCTTCCAAATTTGTAGATCAGAGTG
1087s mm5.chr16      92040470 44 +  98801893 AGGCCCAGAGCTCTTCAGTTCTTCCAAATTTGTAGATCAGAGTG
1088s rn3.chr11      31574513 44 +  87800381 AGGCCCAGAGCTCTTCAGTTCTTCCGAATTTGTAGATCAGAGTG
1089s canFam1.chr31  31078280 44 +  41215879 AGGTCCAAAGCTCTTCAGTTCTTCCAAATTTGTAGATCAGAGTG
1090s fr1.chrUn     305707709 44 + 349519338 AGCCCCATAAATCTTCAGTGCGTCCGAACTTGTAGATCAGGGTG
1091
1092a score=71764.0
1093s hg17.chr22     30120223 42 +  49554710 ATGAGCAGCACCTTAGCTAAGATCGCGGAGATAGAAGCAGAG
1094s panTro1.chr23  30222612 42 +  50034486 ATGAGCAGCACCTTAGCTAAGATCGCGGAGATAGAAGCAGAG
1095s mm5.chr11     118487759 42 - 121648857 ATGAGCGGGACCTTAGCGAAGATCGCGGAGATCGAAGCCGAG
1096s rn3.chr14      28338530 42 - 112220682 ATGAGTGGGACCTTAGCGAAGATCGCGGAGATCGAAGCCGAG
1097s canFam1.chr26  27465575 42 +  41009621 ATGAGCAGCACCTTAGCGAAGATCGCGGAGATCGAAGCCGAG
1098s galGal2.chr15   3499721 42 -  12438626 ATGAGTGGGACTCTGGCGAAGATCGCGGAGATCGAGGCTGAG
1099s fr1.chrUn     242087985 39 - 349519338 ATGAGT---ATTCTTGCTAAAATAGCAGAGATTGAAAATGAG
1100
1101a score=249684.0
1102s hg17.chr22            30160419 187 +  49554710 TCACTGTCGGTATTCCAATTCATCTACACTGATAACTTTGGCG---GGCATGGAGGGCAGGGGTTGCTGTAGCACATCTGAGCCAAACCATTTGGCAAGGCCCACAGGGGAGCT------GCTCCTCTGGCTGGGGCGATGCTCCAGCTGGGA--GTGCATGTGGGGCAGGCCTGACCGGCTGGGCACGTTCTGAGGG
1103s panTro1.chr23_random   7588856 187 -  16744317 TCACTGTCGGTATTCCAATTCATCTACACTGATAACTTTGGCG---GGCATGGAGGGCAGGGGTTGCTGTAGCACATCTGAGCCAAACCATTTGGCAAGGCCCACAGGGGAGCT------GCTCCTCTGGCTGGGGCGATGCTCCAGCTGGGA--GTGCATGTGGGGCAGGCCTGACCGGCTGGGCACGTTCTGAGGG
1104s mm5.chr11            118509980 187 - 121648857 TCACTGTCTATATTCCAGTTCATCTACACTGATGACTTTGGTG---GGCATGGAGGGCAGAGGCTGCTGTAGCACATCTGAGCCAAACCATTTGGCAAGGCCCACAGGGGAGCT------GCTCCTTTGGCTGGTACGATGCTCCAGCTGGGA--GTGCATGTGGGGCATGCCCGACCGGCTGGGTACATTCTGAGGA
1105s rn3.chr14             28360090 187 - 112220682 TCACTGTCTATATTCCAGTTCATCTACACTGATGACTTTGGTG---GGCATGGAGGGCAGAGGCTGCTGTAGCACATCTGAGCCAAACCACTTGGCAAGACCCACGGGGGAGCT------GCTCCTTTGGCTGGTGCGATGCTCCAGCTGGGA--GTGCATATGGGGCAGGCCTGACCGGCTGGGTACATTCGGAGGA
1106s canFam1.chr26         27493563 187 +  41009621 TCATTGACGGTACTCCAATTCATCTACACTGATGACTTTGGCA---GGCATGGAGGGCAGGGGTTGCTGTAGCACATCTGAGCCAAACCACTTAGCGAGGCCTACTGGGGAGCT------GCTCCTCTGGCTGGGGCGATGTTCCAGCTGGGA--GTGCACGTGGGGCAGGCCTGACCTGGTGGGCACATTCTGAGGG
1107s galGal2.chr15          3506922 187 -  12438626 TCACTGCCGATATTCCAGTTCATCTACACTGATGACTTTGGAT---GGCATGGAAGGGAGAGGCTGCTGCAAGACATCTGAACCAAACCACTTTGCAAGGCCAATGGGAGAGCC------ACTTCTCTGGCTGGGACGATGGTCGAGCTGCGC--GTGCCCATGAGATAATCCAGTCCGAGACGGCACATTCTGAGGT
1108s danRer1.chrNA        320160139 177 + 390413307 TCACTGGCGGAACTCGAGCTCATCAACACTGATCACTTTAGTGGAAGGCATGGAAGGGAGAGGCTGCTGCAGCATGTCTGAACCAAACCACTTGGCCAGGCCCAGAGGGGGACTTGCACCTCTCCGCTGGTTTGTCCGATG--------GGGACCGTGGCTCTGGGAC-------------TGGGGGCCTCCTGAGGG
1109
1110a score=49183.0
1111s hg17.chr22            30160606 55 +  49554710 GTTGTCTGAACGCTGACAGCTGCTGCATGGGAACCAGAGCCTGGAGGATGCAGAA
1112s panTro1.chr23_random   7589043 55 -  16744317 GTTGTCTGAACGCTGACAGCTGCTGCATGGGAACCAGAGCCTGGAGGATGCAGAA
1113s mm5.chr11            118510167 52 - 121648857 ---GTCTGAACGCTGATAGCTGCTGCCTGGGAACTAGAGCCTGGAGGATGCAGAA
1114s rn3.chr14             28360277 52 - 112220682 ---GTCTGAACGTTGATAGCTGCTGCCTGGGAACTAGAGCCTGGAGGATGCAGAA
1115s canFam1.chr26         27493750 55 +  41009621 GTTGTCTGAACGCTGACAGCTGCTGCCGGGGAACCAGAGCCTGGAGGATGAAGAA
1116s galGal2.chr15          3507109 55 -  12438626 GTTGTTTGCACACCAGCAGGTGATCCCTGTGCTCCAGTGCCTGTGGAATGTAAAG
1117
1118a score=2821.0
1119s hg17.chr22     30665273 6 +  49554710 ATGGGG
1120s panTro1.chr23  30832251 6 +  50034486 ATGGGG
1121s mm5.chr5       31452558 6 + 149219885 ATGGGG
1122s rn3.chr14      28756724 6 - 112220682 ATGGGG
1123s galGal2.chr15   3672628 6 -  12438626 ATGGGG
1124s fr1.chrUn     333993217 6 - 349519338 ATGGTC
1125s danRer1.chr10   6576471 6 -  25436222 ATGGCT
1126
1127a score=177812.0
1128s hg17.chr22     30665279 81 +  49554710 GACCGGGAGCAGCTGCTGCAGCGGGCGCGGCTGGCCGAGCAGGCGGAGCGCTACGACGACATGGCCTCCGCTATGAAGGCG
1129s panTro1.chr23  30832257 81 +  50034486 GACCGGGAGCAGCTGCTGCAGCGGGCGCGGCTGGCCGAGCAAGCGGAGCGCTACGACGACATGGCCTCCGCCATGAAGGCG
1130s mm5.chr5       31452564 81 + 149219885 GATCGAGAGCAGCTGCTGCAGCGGGCGCGACTGGCGGAGCAGGCGGAGCGCTACGACGATATGGCCTCCGCCATGAAGGCG
1131s rn3.chr14      28756730 81 - 112220682 GACCGAGAGCAGCTGCTGCAGCGGGCGCGACTGGCGGAGCAGGCGGAGCGCTACGACGACATGGCCTCCGCCATGAAGGCG
1132s canFam1.chr26  27923330 81 +  41009621 GACCGAGAGCAGCTGCTGCAGCGGGCGCGGCTGGCCGAGCAGGCGGAGCGCTACGACGACATGGCCTCCGCCATGAAGGCG
1133s galGal2.chr15   3672634 81 -  12438626 GACCGAGAGCAGCTGCTGCAGCGAGCCCGCCTGGCCGAGCAGGCGGAGAGATACGACGACATGGCCTCGGCCATGAAGTCG
1134s fr1.chrUn     333993223 81 - 349519338 GACCGCGAGCAGCTGGTGCAGAAAGCCAGGCTGGCTGAACAGGCTGAGAGATATGATGATATGGCCGCTGCAATGAAATCG
1135s danRer1.chr10   6576477 81 -  25436222 GACCGGGAACAACTGATCCAAAGAGCCCGTCTGGCGGAGCAGGCGGAGCGCTATGATGATATGGCCTCCGCGATGAAGCTG
1136
1137a score=239048.0
1138s hg17.chr22     30939054 212 +  49554710 TC-AGGCATAGTAGCCGTGAATAAAGACCACCACAGCCAGGAGGAGGATGGCGTTGATGTTCACTATTGTCCTCCACGAGGGCCTCTCAGACGTGTCTGTGAGCTTCTTGCTCAAGGCTTCCTCCTCCTCCTTGGTTAGCTTGGGTC---CCTTCTG---------CAAACCGCAGAA-CAAGTCATAAGCTTTCTTGAGGCATCCACGTGATTTCTCAGGATAAT
1139s panTro1.chr23  31094394 212 +  50034486 TC-AGGCATAGTAGCCGTGAATAAAGACCGTCACAGCCAGGAGGAGGATGGCGTTGATGTTCACTATTGTCCTCCACAAGGGCCTCTCAGACGTGTCTGTGAGCTTCTTGCTCAAGGCTTCCTCCTCCTCCTTGGTTAGCTTGGGTC---CCTTCTG---------CAAACCGCAGAA-CAAGTCATAAGCTTTCTTGAGGCATCCACGTGATTTCTCAGGATAAT
1140s mm5.chr10      54573933 203 - 130633972 TC-AGGCAAAATAGCCATAGAAAAACGCTGCTACAGCCAAGAGGAGGATGACATTGACGTTCATGACCGTCCGCCAGAAGGGCTTCTCTGTTGTGTCTG------------TCAGAGCTTCCTCCTCTACTTTAGTCAACTTGAATTCAGCTCTTTG---------CAAACCACAGAA-TAGGTCACACGTCTTCTTGAGACATCCACGAGGTTTCTCAGTTTGGT
1141s rn3.chr20      12876263 215 +  55296979 TC-AGGCAAAATAGCCATAGAAAAAAGCCGCCACGGCCAAGAGGACAATGACATTGACGTTCACGACCGTCCGCCAGAAGGGCTTCTCGGATGTGTCTGTCAGCTTCTTCTTCAGGGCTTCTTCCTCCTCTTTAGTCAGCTTGGGTTCCGCTCTTTG---------CAAACCACAGCA-TAGGTCATAAGTCTTCTTGAGACATCCACGAGGTTTCTCCGTTTGGT
1142s canFam1.chr26  28103537 215 +  41009621 TC-AGGCAAAATAGCCATGGGCAAAGACAGCCACTGCTAGGAGTAGAATGGCATTGACATTCACTATAGTCCTCCATAAAGGCTTCTCAGATGTGTCTGTCAGCTTCTTTTTCTGGGCTTCTTCCTCTTCTTTGCTCAGTTTGGGACCTGTCTTCTG---------CAAACCACAAAA-TATGTCATAAGCCTTCCTGAGGCATCCACGGGGTTTCTCAGGATTAT
1143s galGal2.chr15   8705700 216 +  12438626 CCTATGCAAAAAAGGCATGGCAAAATACAGCCACAGTCAGTAGGATGATGCCGTTGATATTCACAACATTCCTCCAAAGTGGCACTTCTGATGTGTCAGTCAGTTTCTTCTTCAGCGCTTCCTCTTCCTCCTTGCTCAGTTTGGGTC---CTTTTTG---TTGGTCTAAGCCACAGAA-CCAGTTGTAAGCTTTCTTTAGGCATCC---TGGGTCTTCACTTTCCT
1144s fr1.chrUn     241992320 217 - 349519338 TT-ACGCGAAAAAGCCGTGGCAGAAGAAAGCGACAGCCAGGAGGATGAGGGCGTTGACGTTGACCACGTTCCTCCACAGCGGCTTCTCCGAGGTGTCCGTGAGCTTCCGCTTCATCTCGGCTTCTTCTTCCGGGGTCAGTTTGA------CCGTTTGGTTCTGTTCCAGCCCGCAGAAGCACATCAC-CGCCTTCTTGC-ACAGACCCGGTTGTTCTTGGGGTTCT
1145s danRer1.chrUn  30145435 215 + 367113659 TT-AACCGAAGAAACCGTGGAAAAAGACGCAGACGGTGAGGAGGATAACGGCGTTAGCGTTGACCACATTTCTCCATAGAGGTTTCTCAGTGGTGTCGGTGAGCTTCATCTTCAGCTCAGCCTCCTGTTCTTTAGTCAGTTTGGGAGCATTGCCTTG------ATCGAAGCCGCAGAA-CCAGTTGTAGGCCTTCTTACAACAGCC---TGGCTCCTCACGCATCT
1146
1147a score=593066.0
1148s hg17.chr5     131424298 81 + 180857866 ATGAGCCGCCTGCCCGTCCTGCTCCTGCTCCAACTCCTGGTCCGCCCCGGACTCCAAGCTCCCA----TGACCCAGACAACGCCC
1149s panTro1.chr4  137757118 81 + 188378868 ATGAGCCGCCTGCCCGTCCTGCTCCTGCTCCAACTCCTGGTCCGCCCCGGACTCCAAGCTCCCA----TGACCCAGACAACGTCC
1150s mm5.chr11      67741889 85 - 121648857 ACCAGCATCCACACCATGCTGCTCCTGCTCCTGATGCTCTTCCACCTGGGACTCCAAGCTTCAATCAGTGGCCGGGATACCCACC
1151s rn3.chr10      71032732 73 - 110733352 ACCAGCATCCTCTGCATGCTGCTTCCGCTCCTGATGCTCTTCCACCAGGGACTCC-AGTTTTCA-----------GGCAGTGCCC
1152s canFam1.chr11  21697475 75 +  75769841 ATGAGCAGCTTCCCCATCCTGCACCTTCTCTTGCTCCTG------CTTGGATGCCAAGTCCCAC----AGGCACAGGGGAGGCCT
1153
1154a score=7416.0
1155s hg17.chr5     131424379 81 + 180857866 TTGAAGACAAGCTGGGTTA---ACTGCTCTAACATGATCGATGAAATTATAACACACTTAAAGCAGCCACCTTTGCCTTTGCTG
1156s panTro1.chr4  137757199 81 + 188378868 TTGAAGACAAGCTGGGTTA---ACTGCTCTAACATGATCGATGAAATTATAACACACTTAAAGCAGCCACCTTTGCCTTTGCTG
1157s mm5.chr11      67741976 57 - 121648857 TTAACCAGAACGTTGAATT---GCAGCTCT---ATTGTCAAGGAGATTATAG------GGAAGCTCCCA---------------
1158s canFam1.chr11  21697550 84 +  75769841 TTTTCGACAGACCTGCCTAAGCAATACTTCACAATGATCAATGAAATTATGGAGATGTTAAACAAGTCACCCTCGCCTTCAGAA
1159
1160a score=137534.0
1161s hg17.chr5     131556601 71 + 180857866 TCAGTCAACTTCTGTTGATCCACAAGGTCTCAAGAACTCCTGTCCTCGTTCATGGAACCACTTATTGGAGA
1162s panTro1.chr4  137889227 71 + 188378868 TCAGTCAACTTCTGTTGATCCACAAGGTCTCAAGAACTCCTGTCCTCGTTCATGGAACCACTTATTGGAGA
1163s mm5.chr11      67877858 71 - 121648857 TCAATCAACTTCCGTTGTTCCACAAGGTCTTAAGAACTCCTGTCCTCGCTCATGGAACCACTTGTTGGAGA
1164s rn3.chr10      71169107 71 - 110733352 TCAATCGACTTCCGTTGTCCCACAAGGCCTCAAGAACTCCTGTCCTCGCTCATGGAACCACTTATTGGAGA
1165s canFam1.chr11  21882340 71 +  75769841 TCAGTCAACTTCTGTTGATCCACATGGCCTCAAGAATTCCTGTCCTCGTTCATGGAACCACTTATTGGAGA
1166s galGal2.chr13  15754170 71 +  17279963 TCAGTCAACCTCTGTTCTCCCACAGGGTCTTAAGAATTCGTTTCCTCTTTCATGAAACCATTTGTTTGAAA
1167s fr1.chrUn     144469271 71 + 349519338 TCAATCCACTTCTGTCAAACCGCAGGGTCTCCTGAATTCTTGACCTCGCTCATGAATCCACTTGTTCGACA
1168s danRer1.chr17  23182922 71 -  35757233 TCATTCCACCTCAGATAATGCACAGGGCCGTCTGAATTCTTGACCTCGTTCATGTATCCATTTGTTCGATA
1169
1170a score=153108.0
1171s hg17.chr5     131621326 93 + 180857866 ATGCCCCATTCCGTGACCCTGCGCGGGCCTTCGCCCTGGGGCTTCCGCCTGGTGGGCGGCCGGGACTTCAGCGCGCCCCTCACCATCTCACGG
1172s panTro1.chr4  137954377 93 + 188378868 ATGCCCCATTCCGGGACCCTGCGCGGGCCTTCGCCCTGGGGCTTCCGCCCGGAGGGCGGCCGGGACTTCAGCGCGCCCCTCACCATCTCACGG
1173s mm5.chr11      67940186 93 - 121648857 ATGACCCACTCGGTGACCCTGCGCGGCCCTTCACCCTGGGGCTTCCGCCTGGTGGGCGGCCGGGACTTCAGTGCTCCCCTCACCATCTCGCGG
1174s rn3.chr10      71238657 93 - 110733352 ATGACCCACTCGGTGACCCTGCGCGGCCCTTCACCCTGGGGCTTCCGCCTGGTGGGCGGCCGTGACTTCAGTGCCCCCCTCACCATCTCGCGG
1175s canFam1.chr11  21937834 93 +  75769841 ATGCCGCACTCCGTGACCCTACGCGGCCCGTCGCCCTGGGGCTTCCGCCTGGTAGGCGGCCGGGACTTCAGCGCACCCCTCACCATCTCGCGG
1176s fr1.chrUn     144492794 93 + 349519338 ATGTCGCAGACCGTTACACTAAAGGGACCCTCTCCTTGGGGGTTCCGGCTGGTGGGAGGACGCGATTTCAGCACCCCGTTAACCATCTCCAGG
1177s danRer1.chrUn 204956892 93 + 367113659 ATGTCTCACACTGTGACTCTCAGCGGTCCCTCGCCCTGGGGTTTTCGGCTGGTGGGTGGACGAGACTTCAGCACACCGCTCACCATTTCCAGA
1178
1179a score=705535.0
1180s hg17.chr5     131847541 125 + 180857866 CTACGGTGCACAGGGAATGGCCTGGATGGAG---GGCAACCGGACTGGGGT---CAGCAGGCTGTCCAGCCA---GGTGGCATCCATGTTCTTCAGATCTGTGAAGACACGCTGTAGACTCAGCCCAATATCCC
1181s panTro1.chr4  138180513 125 + 188378868 CTACGGTGCACAGGGAATGGCCTGGATGGAG---GGCAACCGGACTGGGGT---CAGCAGGCTGTCCAGCCA---GGTGGCATCCATGTTCTTCAGATCTGTGAAGACACGCTGTAGACTCAGCCCAATATCCC
1182s mm5.chr11      68232672 134 - 121648857 CTATGGTGCACAAGGAATGGCCTGAATAGAGGGCGGCAGCCTCACAGAGTTGCCCAGCAGGCTGTCCATCCACATGATGGAGTCCATATTCTTCATCTCCGTGAAGACATGTTGTATGCCTATCCCAATGTCCC
1183s rn3.chr10      71497371 131 - 110733352 TTATGGTGCACAAGGAATAGCCTGAATGGAG---GGCGGCCTGGTAGAGTTGCCCAGCAGGGTGTCCATCCACATGACGGGGTCCATATTCTTCATCTCTGTGAAGACACGCTGTATGCCTATCTCGATGTCCC
1184s canFam1.chr11  22141585 113 +  75769841 CTATGGTGCACAAGGAATGGCCTGGATGGAG---GGCAGTCTGACTGGAGT---CAACAGGCTGTCCAGCCA---GCTGGTGTCCATGTTCTTCAGATCTGAAGAGA------------TCAGCCCAACATACC
1185
1186a score=0.0
1187s hg17.chr6 108299600 2 + 170975699 TT
1188
1189a score=2325.0
1190s hg17.chr6     108299600 2 + 170975699 TT
1191s panTro1.chr5  110600637 2 + 175429504 TT
1192s mm5.chr10      87897895 2 - 130633972 TT
1193s rn3.chr20       8534936 2 -  55296979 TT
1194s canFam1.chr12  67925618 2 +  75455811 TT
1195s galGal2.chr3   42632727 2 - 108638738 TT
1196s fr1.chrUn     159061419 2 + 349519338 TC
1197
1198a score=237362.0
1199s hg17.chr6     108299602 142 + 170975699 AGTCATCATCTTCTTCTTCCTCCTCTTCTTCCTCAAAGCTATCTTCAAAGCCCTCACTGTCCTCCTGGTCTTCATCCCCCTCTATTGC------TGTATCCCACTGTGGGTGATTTTCTGGCACAGGCTTAGCCTCATGAACTTCCAA
1200s panTro1.chr5  110600639 142 + 175429504 AGTCATCATCATCTTCTTCCTCCTCTTCTTCCTCAAAGCTATCTTCAAAGCCCTCACTGTCCTCCTGGTCTTCATCCCCCTCTATTGC------TGTATCCCACTGTGGGTGATTTTCTGGCACAGGCTTAGCCTCATGAACTTCCAA
1201s mm5.chr10      87897897 142 - 130633972 AGTCTCCACCTTCCTCTTCCTCCTCCTCTTCCTCAAAGCTGTCTTCAAATCCTTCACTGTCTTCCTGGTCTTCGTCACCTTCTATCGC------TGTGTCCCACTGTGGGTGGTTTTCTGGCACAGGCTTGGCCTCATGAACTTCCAA
1202s rn3.chr20       8534938 142 -  55296979 AGTCACCACCCTCCTCTTCCTCCTCCTCTTCCTCAAAGCTGTCTTCAAATCCTTCACTGTCTTCCTGGTCTTCGTCACCTTCTATTGC------TGTGTCCCACTGTGGGTGGTTTTCTGGCACGGGCTTGGCCTCATGAACTTCCAA
1203s canFam1.chr12  67925620 142 +  75455811 AGTCATCATCTTCCTCCTCTTCTTCCTCCTCCTCAAAGCTATCTTCAAAGCCTTCGCTGTCCTCCTGGTCTTCATCCCCCTCTATTGC------TGTATCCCACTGTGGGTGATTTTCTGGTACAGGCTTAGCCTCATGAACTTCCAA
1204s galGal2.chr3   42632729 142 - 108638738 AATCATCATCTTCCTCCTCTTCCTCTTCTTCCTCAAAACTGTCTTCAAAGCCCTCGCTGTCTTCCTGGTCCTCATCACCTTCTATTGC------TGTATCCCACTGAGGATGATTTTCTGGCACTGGTTTTGCTTCATGAACTTCCAG
1205s fr1.chrUn     159061421 136 + 349519338 AGTCATTGTCCTCGTCGTCGTCTTC------------ACTCTCCTCGATGCCGTCGCTGTCCTCCTGCTCCTCGTCCTCCTCCTCCGTGTCGGGGATGTCCCACTGAGGGTGATTGTCCAGCATAGCCTTGGCTTCGTGGACCTCCAG
1206s danRer1.chr8   26343964 145 -  36410523 AATGATTTTAGTCGTTGTCTTCTTCGTCTTCCTCAGA---CTCCTCAATGCCGTCACTGTCCTCCTGGTCATCCTCCTCTTCCTCAGTTTCTGGGATGTCCCACTGCGGGTGGTTATCCATCATGGCCTTCGCCTCATGAACCTCCAG
1207
1208a score=78207.0
1209s hg17.chr6     108594662 25 + 170975699 ATGAGCAAGCCAGCCGGATCAACAA
1210s panTro1.chr5  110895281 25 + 175429504 ATGAGCAAGCCAGCCGGATCAACAA
1211s mm5.chr10      88143690 25 - 130633972 ATGAGCAAGCCCGCCGGATCAACAA
1212s rn3.chr20       8761429 25 -  55296979 ATGAGCAAGCCCGCCGGATCAACAA
1213s canFam1.chr12  68179741 25 +  75455811 ATGAGCAAGCCGGCCGGATCAACAA
1214s fr1.chrUn     210130082 25 + 349519338 ATGAGCAAAGCCGCCGGCTCAACAA
1215s danRer1.chr20  17232749 25 +  31913010 ATGAGCAAGCCTGCTGGTTCAACAA
1216
1217a score=89508.0
1218s hg17.chr6     108640045 50 + 170975699 TCAGGCATGTCTTATTTTAGATGGAGTATAGCTTTTATCTATTATTTCAT
1219s panTro1.chr5  110940096 50 + 175429504 TCAGGCATGTCTTATTTTAGATGGAGTATAGCTTTTATCTATTATTTCAT
1220s mm5.chr10      88191839 50 - 130633972 TCAGGCATGTCTTATTTTAGATGGAGTATAGCTTTTATCTATAATTTCAT
1221s rn3.chr20      52647276 50 -  55296979 TCAGGCATGTCTTAGTTTAGATGGAGTATAGCTTTTATCTATGATTTCAT
1222s canFam1.chr12  68222804 50 +  75455811 TCAGGCATGTCTTATTTTAGATGGTGTATAGCTTTTATCTATAATTTCGT
1223s galGal2.chr3   42753356 50 - 108638738 TCAAGTATGTCTTATTTTGGATGGTGTGTAGTTTTTGTCTATTACTTCAT
1224s fr1.chrUn     210136674 50 + 349519338 TCAGGCTTGTCTGATCTTAGAGGGGGTGTAGTTCTTGTCCAAGACCTTGT
1225s danRer1.chr20  17245947 50 +  31913010 TTAGGCTTGTCTAATTTTGGAAGGGGTGTAGTTTTTATCCACAGACTCAT
1226
1227a score=92653.0
1228s hg17.chr6     108640095 56 + 170975699 CTTGTAAAAACATGTGAAGACAACG-TTCGTTCTGTGCCAGAGGATGACCAGCGACC
1229s panTro1.chr5  110940146 56 + 175429504 CTTGTAAAAACATGTGAAGACAACG-TTCGTTCTGTGCCAGAGGATGACCAGCGACC
1230s mm5.chr10      88191889 56 - 130633972 CCTGTAAAAACATGTGAAGACAACG-TTCATTCTGGGCCAGAGGATGACCAGCGACC
1231s canFam1.chr12  68222854 57 +  75455811 CCTGTAAAAACATGTGAAGACAACGTTTCATTCTGTGCCAGAGGATGACCAGCAACC
1232s galGal2.chr3   42753406 56 - 108638738 CTTGTAAGAACATATGAAGACAGCG-CTCATTCTGTGCCAGTGGGTGGCCTGCAACC
1233s fr1.chrUn     210136724 56 + 349519338 CCTGTAGAAACATGTGCAGGCATCG-CTCGTTCTGGGCGAGAGGATGACCGGCCACT
1234s danRer1.chr20  17245997 56 +  31913010 CCTGTAGGAACATGTGCAGGCAGCG-CTCATTTTGGGCCAATGGATGACCAGCAACT
1235
1236a score=53058.0
1237s hg17.chr6    108722976 139 + 170975699 ATGGCGGCCTCCTGGTCGCTCTTGGTTACCCTGCGCCCCTTAGCACAGAGCCCGCTGAGAGGGAGATGTGTTGGGTGCGGGGCCTGGGCCGCCGCTCTCGCTCCTCTGGCCACCGCCCCTGGGAAGCCCTTTTGGAAAG
1238s panTro1.chr5 111023287 139 + 175429504 ATGGCGGCCTCCTGGTCGCTCTTGGTTACCCTGCGCCCCTTAGCACAGAGCCCGCTGAGAGGGAGATGTGTTGGGTGCGGGGCCTGGGCCGCCGCTCTCGCTCCTCTGGCCACCGCCCCTGGGAAGCCCTTTTGGAAAG
1239s mm5.chr10     88248538 139 - 130633972 ATGGCGGCCTCCTGGTCGCCCTTGGTTACTCTGCGCTCCGCCGCGCGCAGCCGGCTGACTGGGAGAGGTGTTGGGTGCGGGGCGCGGGTCGTCGCAATCCCTCCTCCGGCCCCTGGCCCTGGGAAACCCCTGTGGAAAG
1240s galGal2.chr3  42777490 100 - 108638738 ATGGCGGCGCCCGTGTCGCCCTTGGTTACT------------GCGTGGTGCCTGCTGCGGGCA--------TCGGCGCGGCGTGTTGTCCGTC--------------TGCTGCCGGCACGGG-----CCCTGCCGAGAG
1241
1242a score=607969.0
1243s hg17.chr7     113660517 168 + 158628139 ATGATGCAGGAATCTGCGACAGAGACAATAAGCAACAGTTCAATGAATCAAAATGGAATGAGCACTCTA---AGCAGCCAATTAGATGCTGGCAGCAGAGATGGAAGATCAAG---TGGTGACACCAGCTCTGAAGTAAGCACAGTAGAACTGCTGCATCTGCAACAACAGCAG
1244s panTro1.chr6  115716623 168 + 161576975 ATGATGCAGGAATCTGCGACAGAGACAATAAGCAACAGTTCAATGAATCAAAATGGAATGAGCACTCTA---AGCAGCCAATTAGATGCTGGCAGCAGAGATGGAAGATCAAG---TGGTGACACCAGCTCTGAAGTAAGCACAGTAGAACTGCTGCATCTGCAACAACAGCAG
1245s mm5.chr6       14955268 168 + 149721531 ATGATGCAGGAATCTGCGACAGAGACAATAAGCAACAGTTCAATGAATCAAAATGGAATGAGCACTTTA---AGCAGCCAATTAGATGCTGGCAGCAGGGATGGGAGATCAAG---TGGTGACACCAGCTCTGAAGTAAGCACAGTGGAGCTGCTGCATCTGCAACAACAGCAG
1246s rn3.chr4       40844510 168 + 187371129 ATGATGCAGGAATCTGCGACAGAGACAATAAGCAACAGTTCAATGAATCAAAATGGAATGAGCACTCTA---AGCAGCCAATTAGATGCTGGCAGCAGGGATGGGAGATCAAG---TGGTGACACTAGCTCAGAAGTAAGCACAGTGGAGCTGCTGCATCTGCAACAACAGCAG
1247s canFam1.chr14  56181068 168 +  63549963 ATGATGCAGGAATCTGCGACAGAGACAATAAGCAACAGTTCAATGAATCAAAATGGAATGAGCACTCTA---AGCAGCCAATTAGATGCTGGCAGCAGAGATGGAAGATCAAG---TGGTGACACCAGCTCGGAAGTAAGCACAGTAGAACTGCTGCATCTGCAACAACAGCAG
1248s galGal2.chr1  165171657 168 - 188239860 ATGATGCAGGAATCTGCGACAGAGACAATAAGCAACAGTTCAATGAATCAAAATGGAATGAGCACTCTA---AGCAGCCAATTAGATGCTGGCAGCAGAGATGGAAGATCAAG---TGGTGACACGAGCACTGAAGTAAGCACAGTGGAACTCCTGCATCTGCAACAACAGCAG
1249s fr1.chrUn     206218864 174 + 349519338 ATGATGCAGGAGTCGGCCACAGAGACAATAAGCAACAGTTCAATGAGTCAAAATGGAATGAGCACCCTAAGCAGCAGCCAATTAGAGGCTGGCAGTAGAGATGGGAGATCAAGCGCTGGTGACACGAGCAGCGAAGTAAGCACAGTCGAGCTGCTGCATCTGCAACAACAGCAG
1250s danRer1.chrUn 132907084 167 + 367113659 ATGATGCAGGAGTCGGCCAATGAGACAATAAGCAACAGTTCAATGAGTCAAAATGGAATGAGCAGCCTA---AGCAGCCAATTAGATGCTGGCAGTAGAGATGGAAGATCAAG---TGGGGAGACGAGCAGTGAAGTAAGCGCAGTCGAGCTGCTGCATCTGC-ACAACAGCAG
1251
1252a score=398171.0
1253s hg17.chr7     116512159 230 + 158628139 TCATGTAGCGGTTGTCCAGTCAGCGTTCTTGGGGGCCTTGCATGTGTGCACATCCAGAGCTTCCAGGCAGTCCTGACAGCGCACGGCGCAGCACCAGTGGAACTTACACCCACACTTGGTCATCCGGGTGACATGGGAGGTGTCGTAGCCTCTCCCACAGCACATGACTTCACAGCTGTCCATGCCCCGGGAAGTCAGGTTGCACACACGGCCTGCTGTACCCAGGGAGC
1254s panTro1.chr6  118798885 230 + 161576975 TCATGTAGGGGTTGTCCAGTCAGCGTTCTTGGGGGCCTTGCATGTGTGCACATCCAGAGCTTCCAGGCAGTCCTGACAGCGCACGGCGCAGCACCAGTGGAACTTACACCCACACTTGGTCATCCGGGTGACATGGGAGGTGTCGTAGCCTCTCCCACAGCACATGACTTCACAGCTGTCCATGCCCCGGGAAGTCAGGTTGCACACACGGCCTGCTGTACCCAGGGAGC
1255s mm5.chr6       17732295 230 + 149721531 TCATGTAGGCGTCGCCCAGTCGGCACTCTTGGGGGCCTTGCATGTGTGCACGTCCAGGGCCTCCAGGCAGTCCTGACAGCGCACGGCACAGCACCAGTGGAATTTACACTCACACTTGGTCATCCGGGTGACGTGGGATGTGTCATAGCCTCTCCCACAACACATAACTTCGCAGCTGTCCATGCCTCGGGAAGTCAAGTTGCACACACGGCCCGCTGTACCCAGGGAGC
1256s rn3.chr4       43819674 230 + 187371129 TCATGTAGGAGTTGTCCAGTCGGCACTCTTGGGGGCCTTGCATGTGTGCACGTCCAGGGCTTCCAGGCAGTCCTGACAGCGCACGGCACAGCACCAGTGGAATTTACACTCACACTTGGTCATCCGGGTGACATGGGATGTGTCATAGCCTCTCCCACAACACATAACTTCGCAGCTGTCCATGCCTCGGGAAGTCAAGTTGCACACACGGCCTGCTGTACCCAGGGAGC
1257s canFam1.chr14  58698446 230 +  63549963 TCATGTGGGAGCCGCCCAGTCGGCGCTCGTGGGGGCCTTGCACGTGTGCACGTCTAGGGCCTCCAGGCAGTCCTGACAGCGCACGGCGCAGCACCAGTGGAACTTACACTCGCACTTGGTCATCCGCGTGACGCGGGACGTGTCGTAGCCTCTCCCGCAGCACATGACCTCGCAGCTGTCCATGCCGCGGGAAGTCAGGTTGCACACGCGGCCCGCCGTCCCCGGGGAGC
1258s galGal2.chr1  166556534 230 - 188239860 TCATGTCCGGGAGGCCCAGCCCGCAGCCTTGGGCGCCTTGCACGTGTGGATGTCCACCTCCTCCAGGCAGTCCTGGCAGCGCACCGCGCAGCACCAGTGGAACTTGCACTCGCATTTGGTCATCCTGCTGACGCGCAACGTGTCGTAGCCACGGCCGCAGCACATCACCTCACAGCTGTCCATGCCGCGGGACGTCTGGTTGCACACCCGGCCGGCCGTCCCCGGAGAGC
1259s fr1.chrUn     117668262 224 - 349519338 --CCGCGGGGGGGGGCCAGGTCACGTC----AGGCCCTTGCAGGTGTGCACGTCCACCTGCTGGTGGCAGTCTCGGCAGAGCACGGCGCAGCACCAGTGGAACTTGCACTCGCACTTGGTGGTGCGGCCGACCCGGGACGTGTCGTAGCCCCGGCCGCAGCACATCACCTCGCAGCCGTCGGTGCCGGGGGACGTCCTGTTGCAGAGGCGCCCGCCGGTCCCCAGCGACC
1260s danRer1.chrUn 193800262 230 - 367113659 TCAAGTCAAATCGAGCCAGTCGGGTTTCTTGTGTAGTTTACAAGTGTGGACGTCCACCGTTTCCTCGCAGTCTCTGCACTCCACAGCGCAGCACCATTTAAACTTGCACTCGCATTTGGTCATGCGGTTTACACGGGTGGTGTCGTACCCGCGGCCGCAGCACATGATCTCACAGCCGTCCATGCCTCTGGAGGACTTGTTGCACACCCGTCCTGACGTACCCAGAGAAC
1261
1262a score=266204.0
1263s hg17.chr7     116714099 53 + 158628139 ATGCAGAGGTCGCCTCTGGAAAAGGCCAGCGTTGTCTCCAAACTTTTTTTCAG
1264s panTro1.chr6  119004369 53 + 161576975 ATGCAGAGGTCGCCTCTGGAAAAGGCCAGCGTTGTCTCCAAACTTTTTTTCAG
1265s mm5.chr6       17978854 53 + 149721531 ATGCAGAAGTCGCCTTTGGAGAAAGCCAGCTTTATCTCCAAACTCTTCTTCAG
1266s rn3.chr4       44072448 53 + 187371129 ATGCAGAAGTCGCCTCTGGAGAAAGCCAGCTTTATCTCCAAACTCTTCTTCAG
1267s canFam1.chr14  58860070 53 +  63549963 ATGCAGAGGTCGCCCCTGGAAAAGGCCAGCGTCCTCTCCAAACTTTTCTTCAG
1268
1269a score=435383.0
1270s hg17.chr7     116945541 246 + 158628139 CTATTTGTTAGGTTTTTCTAGGTGTTCATTTTT---GTGTAAGTTCCAATTCAC---TTCTTTTGAGTTGTTGTTGATTTCTATTTGCCTTGTATTA---CTGCTGCTGCTGCTTCTTTTGGTGTTCTGGGAACACTGGGTGACTTTACTTCTAGGAACAGGAAGAAAAGATTTAACTCTTGAAACACCCAACTCAGTCTTTGATTTACTGTTGCTGCATTCAGTAGTTTGATGGCTGCTGAGAGGACTGACC---TC
1271s panTro1.chr6  119229725 246 + 161576975 CTATTTGTTAGGTTTTTCTAGGTGTTCATTTTT---GTGTAAGTTCCAATTCTC---TTCTTTTGAGTTGTTGTTGATTTCTATTTGCCTTGTATTA---CTGCTGCTGCTGCTTCTTTTGGTGTTCTGGGAACACTGGGTGACTTTACTTCTAGGAACAGGAAGAAAAGATTTAACTCTTGAAACACCCAACTCAGTCTTTGATTTACTGTTGCTGCATTCAGTAGTTTGATGGCTGCTGAGAGGACTGACC---TC
1272s mm5.chr6       18175809 246 + 149721531 CTATTTGTTTGGTTTTTCTACTTGTTCGTGTTT---GTCTAAGGTCCAATTCTC---TTCTTTGGAGTTGTTGTTGATTTCTAGTTGCCTTGTATTG---CTGCTGCTGCTGTTTCTTTTGGTGTTCTGGGAACACTGAGCGACTTTGCTTCTAGGAACAGGAAGAAAAGATTTAACGCTTGAGACACCCATCTCAGTCTTTGATTTACTGTTGCTGCATTCGGCAGTTTGACGGCTGCTGGGAGGACTGGCT---TC
1273s rn3.chr4       44334350 249 + 187371129 CTATTTGTTACGTTTTTCTACGTGTTCGTGTTT---GTCTACGTTCCAATTCTC---TTCTTTGGAGTTGTTATTGATTTCTAGTTGCCTTGTATTACTGCTGCTGCTGCTGCTTCTTTTGGTGTTCTGGGAACACTGGGCGACTTTACTTCTAGGAACAGGAAGAAAAGATTTAACTCTTGAGACACCCAACTCAGTCTTGGATTTACTGTTGCTGCATTCGGTAGTTTGATGGCTGCTGAGAGGACTGGCT---TC
1274s canFam1.chr14  59084680 249 +  63549963 CTGTTGGTTTGGTTTTGCGACTTGTTCGTTTTTTTGGTGGAAGTTTCAAATCTC---TTCTTTTGAGTTGTTGTTGATTTCGGTTTGCCTTGTATTA---CTGCTGCTGCTGCTTCTTTTGGTGTTCGGGGAACACTGGGTGGCTTTACTTCTAGGAACAGGAAGAAAAGATTTAACTCTCGAAACACCCAACTCCGTCTTGGATTGCCTGTTGCTGCATTCGGCCGCTTGGTGGCTGCTGAGAGGACTGGGC---TC
1275s galGal2.chr1  166718518 245 - 188239860 TTATT-GTAAAATTTTTCTGTTTGTTCTTTTTTTT-GTGCAAATTCCAAATCTCTCTTTTTTTTGTGTCGTTATCTGCCTCTATTTGCCTTGTATTA---CTGCTGCTGCT--TTTTTTTAGTACTCTGAGAAGGCTGGGTGACTTTACTTCTCGGTACAGGAAGAAAAGATTTAACTCTTGAACCACCCAGCTCTGTCTTTGAT------TTGCTGCTTTCTACAGTTCGACTGCTGCTGAGAGGACGGATTCCATC
1276
1277a score=404599.0
1278s hg17.chr8     118881131 186 + 146274826 TC---------AAAGTCGCTCAATGTCTCGGTATTTCTTCCTCAAAATAGAGACCTGGTCTTTAAAGAGGACGGGGTCGAGCCTCATCTGAGAGTGGATCAGCGGCATGTAGCCAAACCAGCTGGCAAACGTATTCATGCAGCTCTGTCGCTGGGCAAAGTGGTCAGGGTCAGCCCAACGGGAAGCCCGAGAAGT
1279s panTro1.chr7  121606752 186 + 149542033 TC---------AAAGTCGCTCAATGTCTCGGTATTTCTTCCTCAAAATAGAGACCTGGTCTTTAAAGAGGACGGGGTCGAGCCTCATCTGAGAGTGGATCAGCGGCATGTAGCCAAACCAGCTGGCAAACGTATTCATGCAGCTCTGTCGCTGGGCAAAGTGGTCAGGGTCAGCCCAACGGGAAGCCCGAGAAGT
1280s mm5.chr15      53109074 186 + 104138553 TC---------AAAGTCGTTCAATGTCTCTGTATTTCTTCCTCAGAATTGAGACTTGGTCTTTAAAGAGGACCGGGTCCAGCCTCATCTGAGAATGGATCAGCGGCATGTAGCCAAACCAGCTGGCAAATGTATTCATGCAGCTCTGTCGCTGGGCAAAGTGGTCAGGGTCGGCCCAGCGGGATGCTCGGGAAGT
1281s rn3.chr7       89414686 186 + 143082968 TC---------AAAGTCGTTCAATGTCTCTGTATTTCTTCCTCAGGATTGAGACTTGGTCTTTAAAGAGGACCGGGTCGAGCCTCATCTGAGAGTGGATCAGCGGCATGTAGCCAAACCAGCTGGCAAACGTATTCATGCAGCTCTGTCGCTGGGCAAAGTGGTCAGGGTCAGCCCAGCGAGATGCTCGGGAAGT
1282s canFam1.chr13  20213465 186 +  66159989 TC---------AAAGTCGCTCAATGTCTCGGTATTTCTTCCTCAGAATAGAGACCTGGTCTTTAAAGAGGACAGGGTCGAGCCTCATCTGCGAGTGGATCAGCGGCATGTAGCCAAACCAGCTGGCAAACGTATTCATGCAGCTCTGTCGCTGGGCAAAGTGGTCAGGGTCAGCCCAGCGGGAAGCCCGAGAAGT
1283s galGal2.chr2   14208956 186 - 147590765 TC---------AGAGTCGTTCAATGTCTCGGTATTTCTTCCTCAGGATGGAGACCTGGTCTTTAAAGAGGACAGGGTCGAGCCTCATCTGAGAGTGGATCAGCGGCATATAGCCAAACCAGCTGGCAAAAGTGTTCATGCAGCTCTGCCGTTGGGCGAAGTGGTCGGGGTCGGCCCAGCGTGAGGCCCGGGATGT
1284s fr1.chrUn     293823575 195 - 349519338 TCTGGATGGTTATAGCCTCTCTATGTCCCTGTACTTCTTCCTCAGTATGGACACCTGGTCTTTGAAAAGGACCGGGTCCAGCCTCATCTGTGAGTGGACCAGGGGCATGCTGCCAAACCAGCTGGCAAACTTGTTCATGCAGGTCTGACGCTGGGCAAAGTGGTCCGGGTCGGCCCAGCGAGACGCTCGGGAGCT
1285s danRer1.chrNA  25951001 186 + 390413307 TC---------AGAGTCGCTCGATGTCTCTGTACTTCTTGCGCAGTATTGATACCTGGTCCCTGAACAGAACAGGATCCAGTCTCATTTGCGAATGGACCAGGGGCATTGTGCCAAACCAGCTGGCAAATTTGTTCATGCACGTCTGCCTCTGGGCAAAATGGTCAGGGTCGGCCCAACGTGATGCACGGGACGT
1286
1287a score=116382.0
1288s hg17.chr9     128764156 33 + 138429268 ATGGCCTGCCTGAGCCCCTCGCAGCTCCAGAAG
1289s panTro1.chr11 113605485 33 + 123086034 ATGGCCTGCCTGAGCCCCTCGCAGCTCCAGAAG
1290s mm5.chr2       30226931 33 + 181686250 ATGGCCTGCCTGAGTCCCTCACAACTCAAGAAG
1291s rn3.chr3        9310853 33 + 170969371 ATGGCCTGCCTGAGTCCCTCACAACTCAAGAAG
1292s canFam1.chr9    6350671 33 -  53642819 ATGGCCTGCCTGAGCCCCTCGCAGCTCCAGAAG
1293
1294a score=-3882.0
1295s hg17.chr9    128787519 1 + 138429268 C
1296s mm5.chr2      30244450 0 + 181686250 -
1297s rn3.chr3       9330108 0 + 170969371 -
1298s canFam1.chr9   6365310 0 -  53642819 -
1299s fr1.chrUn    290357729 0 - 349519338 -
1300
1301a score=2555.0
1302s hg17.chr9     128787520 5 + 138429268 TAGGC
1303s mm5.chr2       30244450 5 + 181686250 TAGGC
1304s rn3.chr3        9330108 5 + 170969371 TAGGC
1305s canFam1.chr9    6365310 5 -  53642819 TATGC
1306s galGal2.chr17   5207254 5 -  10632206 TAAAC
1307s fr1.chrUn     290357729 5 - 349519338 CAAAG
1308
1309a score=71382.0
1310s hg17.chr9     128787525 62 + 138429268 CATCAGCAATATCAGGAGGTAGAGAGGCAGAAGGAGATTGTCTATCTGTGTAGTGTATGCTT
1311s mm5.chr2       30244455 62 + 181686250 CATCAGCAATATCAGTAGGTAGAGAGGCAACAGGAGATTGTCTATCTGAGTAGTGTACGCTT
1312s rn3.chr3        9330113 62 + 170969371 CATCAGCAAAATCAGTAGGTAGAGGGGCAACAGGAGATTGTCTATCTGAGTTGTGTATGCTT
1313s canFam1.chr9    6365315 62 -  53642819 CATCAGCAATATCAGGAGGTAGAGAGGCAACAGGAGATTGTCTATCTGTGTCGTGTATGCTT
1314s galGal2.chr17   5207259 62 -  10632206 CATAAACATGATCTGGAGGTAGAGAGGTAACAGCAAATTATCAATTTGGGTTGTGTAAGCTT
1315s fr1.chrUn     290357734 62 - 349519338 CAACAGCAGGATAAAGAGGTAAAGTGGGAGGAGGAGGTTGTCTATTTGGAAGGTGTAAGCTT
1316s danRer1.chr21  12648417 62 -  13488766 CAGCAGGAGGATGTAGAGATACAGAGGAAGCAGAAGGTTGTCAATCTGCGACGTATAGGCCT
1317
1318a score=2211540.0
1319s hg17.chr9            128787587 1515 + 138429268 CCAGGAGGGACA---CAGTGCTGATGGACCCCAAA--ATCCAAGCATAACTGTAGTTTAGGTCCACTCCACTGTCAAAGATTAAGATCAGAGCTACAGAAATGATCTGCGCAAATATAGATGTCATGGTCCCCTCAAAAGTCTTTTTGGTTCCAGGCCAGCGGATCTCCCCCATGGTGCTACCGAAGATGGAGGCCACAGTATCACCCACACCCACAGCCAGGACACCGGCATAGGGGACGAGGGCCCTGGCTCCTCCCAGGCTACCCTTCTGTGTGCAGGGTCTGGGGATCAGCCAGATGGGAAGAGACATGCCCAGGAGCAGGTAGATGTGTGTCAGAATGAGTGGTCCACTGTCTCGTTCATCCAGAAAAAGGGACAGGAAGCTCCGTAGAGTGTGACCCAAAGGCTTGATGCGGAAGTAGCGCACATACTCCAGGAAGATGAAGACCGCCAGGCATACAGTGGCGGCTACATAGAGCAGTGGCCGGTCAAAGATGATACCTGGGATGTAGGTGGCTACCACAATGAGGTGGAAATACTTTCGGGCGATGGTGGGGGCCTGGTGCTTCTTGGACTCGGAAGATGACCGCTTGGCATTCTGGTACAGCACCACCAGGCAGGCCAAGGTGGCCAGCAGAGACCAATAGGCTAGGAGGTAGATGCGGGTGTCTGTCTGGAAGAGAAACTGAAGAAGCCAGAGCAGGGGATTCCTGCGGATGAGCCGGTGCAGCCAGGGTAGGACCACACCAAGGCTCAGCACACAGGTCATGAGGTGGAAGAAGATGGAGGAGGCCCAGGTGCCTGAGTCCATGAAGACAAACAGAGTGCTGAAGAAAATGCCCATGAGTACCATCCCTACTACCACCACCAGCAGGAAGAAGTCCACTGGGTC---CCCCTGACTTTCCACCAGTGTCAGAGAGCGCTTGATGAGCTGGTTGAGGACAAAGCTAATGCCACCCAATACCAGCAGTGCCTCACCAGGGGTGAAGCAGCGGGGCAGCAGGTACAGCAGGATCATGTTGAGATAAACGAAGATCAGAAGGACTTCCAGGACTTCGATCACCTCCCCCACGCTCAACGAGTGCTTCATGATATAAATGATAACACCTCCAGCCAAGCCCAAGATGACACAAGTGTTGGTTGGCACTGGGCGAGTGATGCCGAGCGCCAACACTGATGAGAAGAGGGCCACTGCCATGCCAGTGGCTGCCACCACAATGCCAAAACGCTCAAAGAACGGGTTCCCAGCAGTCTGGCACCGCTCCTTCATGACTAGTCCAAGCAAAGGCATGACCATGGAGGCGGGCAATAGGCCACTGTTTGCGGACATTCGGAACTGGAAGACGGCGCTTCCCTGCTGTAGCAGCCGGTCCCACTTGTATTGGACGTAGAAGGCCTGCACTGCGAGGGCCACGGCGCACCACGAGTATCGGTCCCATACGGTTGCGTGGATGCTCAGCACCACTGCAAACACTACTGCCGCCTCTGCCAGCACCGATCCACTCAGCGGAGCCCCAG
1320s panTro1.chr11_random  46298820 1517 -  53199993 CCAGGAGGGGCATGCC--TGCAGATGGACTCTAGAGGATCCAAGCATAACTGTAGTTTAGGTCCACTCCACTGTCAAAGATTAAGATCAGAGCTACAGAAATGATCTGCGCAAATATAGATGTCATGGTCCCCTCAAAAGTCTTTTTGGTTCCAGGCCAGCGGATCTCCCCCATGGTGCTACCGAAGATGGAGGCCACAGTATCACCCACACCCACAGCCAGGACACCGGCATAGGGGACGAGGGCCCTGGCTCCTCCCAGGCTACCCTTCTGTGTGCAGGGTCTGGGGATCAGCCAGATGGGAAGAGACATGCCCAGGAGCAGGTAGATGTGTGTCAGAATGAGTGGTCCACTGTCTCGTTCATCCAGAAAAAGGGACAGGAAGCTCCGTAGAGTGTGACCCAAGGGCTTGATGCGGAAGTAGCGCACATACTCCAGGAAGATGAAGACCGCCAGGCATACAGTGGCGGCTACATAGAGCAGTGGCCGGTCAAAGATGATACCTGGGATGTAGGTGGCTACCACAATGAGGTGGAAATACTTTCGGGCGATGGTGGGGGCCTGGTGCTTCTTGGACTCGGAAGATGACCGCTTGGCATTCTGGTACAGCACCACCAGGCAGGCCAAGGTGGCCAGCAGAGACCAATAGGCTAGGAGGTAGATGCGGGTGTCTGTCTGGAAGAGAAACTGAAGAAGCCAGAGCAGGGGATTCCTGCGGATGAGCCGGTGCAGCCAGGGTAGGACCACACCAAGGCTCAGCACACAGGTCATGAGGTGGAAGAAGATGGAGGAGGCCCAGGTGCCTGAGTCCATGAAGACGAACAGAGTGCTGAAGAAGATGCCCATGAGTACCATCCCTACTACCACCACCAGCAGGAAGAAGTCCACTGGGTC---CCCCTGACTTTCCACCAGTGTCAGAGAGCGCTTGATGAGCTGGTTGAGGACAAAGCTAATGCCACCCAATACCAGCAGTGCCTCGCCAGGGGTGAAGCAACGGGGCAGCAGGTACAGCAGGATCATGTTGAGATAAACGAAGATCAGAATGCCTTCCAGGACTTCGATCACCTCCCCCACGCTC-CCTAGAGCTTCATGATATAAATGATAACACCTCCAGCCAAGCCCAAGATGACACAAGTGTTGGTTGGCACTGGGCGAGTGATGCCGAGCGCCAACACTGATGAGAAGAGGGCCACTGCCATGCCAGTGGCTGCCACCACAATGCCAAAACGCTCAAAGAACGGGTTCCCAGCAGTCTGGCACCGCTCCTTCATGACTAGTCCAAGCAAAGGCATGACCATGGAGGCGGGCAATAGGCCACTGTTTGCGGACATTCGGAACTGGAAGACGGCGCTTCCCTGCTGTAGCAGCCGGTCCCACTTGTATTGGACGTAGAAGGCCTGCACTGCGAGGGCCACGGCGCACCACGAGTATCGGTCCCATACGGTTGCGTGGATGCTCAGCACCACTGCAAACACTACTGCCGCCTCTGCCAGCACCGATCCACTCAGCGGAGCCCCAG
1321s mm5.chr2              30244517 1509 + 181686250 CCAGAAGGGATA---CAGTGCTGATGGACCCCAAA--ATCCAGGCATAACTGTAGTTCAGGTCTACTCCACTGTCAAAGATTAAGATTAGAGCTACAGAGATGATTTGTGCAAATATAGATGTCATAGTCCCCTCGAAGGTTTTCTTAGTTCCAGGCCAGCGGATCTCTCCCATGGTGCTGCCAAATATGGAGGCCACAGTATCACCCACACCCACAGCCAAGACCCCAGCATAGGGGACCAGGGCTCTTGCTCCTTCCAGGCTGTCCTTCTGTGTACAGGGTCTGGGGATCAGCCAAATAGGAAGAGACATGCCCAGAAGCAGGTAGATGTGTGTTAGGATAAGGGGTCCACTGTCTCGTTCATCCAGGAAGAGGGACAGAAGGCTTCGCAGAGTGTGACCCAAGGGCTTTATTCGGAAATAGCGCACATACTCCAGGAAGATGAAGACTGCCAGGCACACAGTGGCGGCCACATACAGCAGTGGCCGGTCAAAGATGATGCCCGGGATATAAGTGGCTACCACAATGAAGTGGAAATACTTTCTTGTAATGGTAGGCGCCCTGTGCTTCTTGGACTCAGAAGACGACCGCTTAGCATTCTGGTACAGCACCACCAGGCAGGCCACAGAGGCCAGCAAAGACCAATAGGCAAGGAGGTAGATGCGAGTTTCAGTGTAGAAGAGGAACTGAAGAAGCCAAAGCAGGGGGTTCCTACGAATGAGCCAGTGCAGCCAGGGCAGAACCACACCAAGGCCCAGCACACAGGTCATGAGGTGGAAGAAGATGGAAGAGGCCCAGGTGCCTGAATCCATGAAGACAAAGAGGGTGCTGAAAAAGACACCCATGAGCACCATCCCTACCACCACCACCAACAGGAAGAAGTCCACTGGGTC---CCCCTGGCTTTCA------GTCAGAGAGCGCTTGATGAGTTGGTTAAGGACGAAGCTAATGCCACCCAATACCAGCAGTGCCTCCCCAGGAGTGAAGCATCGGGGCAGCAGGTACAGCAGGATCATGTTGAGATAAACAAATATTAGCAGGACTTCCAGGACCTCGATCACCTCGCCTACACTGAGCGAGTGCCTCATAATATAAATGATAACGCCTCCAGCCAAACCAGAGATGGCACAAGTATTGGTGGGCACCGGGCGAGTAATGCCCAGTGCCAACACGGAGGAGAAGAGGGCCACTGCCATGCCAGTAGCTGCAACCACAATGCCGAAGCGCTCGAAGTATGGGTTCCCTGCAGTCTGGCAGCGCTCCTTCATGACTAGCCCAAGCAAAGGCATGACCATGGAGGCCGGCAGTAAGCCGCTGTTCGCGGACATCCGGAACTGGAAAACGGCATTGCCCTGCTGGAGCAGCCGGTCCCACTTGTACTGGACGTAGAAGGCCTGCACCGCGAGGGCCACCGCGCACCAGGAGTATCGGTCCCACACTGCAGCGTGGATGCTCAACACCACGGCGAACACCACTGCAGCCTCCGCCAGCACCGACCCGCTCAGCGCAGCCCCAG
1322s rn3.chr3               9330175 1509 + 170969371 CCAGAAGCGACA---CAGTGCTGATGGACCCCAAA--ATCCAAGCATAGCTGTAGTTCAGGTCTACTCCACTGTCAAAGATTAGGATCAGAGCCACAGAGATGATTTGTGCAAATATAGATGTCATAGTTCCCTCGAATGTTTTCTTAGTTCCAGGCCAGCGGATCTCCCCCATGGTGCTGCCAAATATGGAGGCCACAGTATCGCCCACACCCACAGCCAGGACCCCAGCATAGGGGACCAGGGCTCTTGCTCCTCCGAGGCTGCCCTTCTGTGCACAGGGTCTGGGGATCAGCCAAATGGGAAGAGACATGCCCAGAAGCAGGTAGATGTGCGTCAGGATGAGGGGCCCGCTGTCCCGTTCATCCAGGAAGAGGGACAGAAGGCTGCGCAGAGTGTGACCCAGGGGCTTGATTCTGAAATAGCGCACATACTCCAGGAAGATGAAGACGGCCAGACACACGGTGGCGGCCACATACAGCAGTGGCCGGTCAAAGATGATACCGGGGATGTAAGTGGCCACCACAATGAAGTGGAAATACTTTCTGGTAATGGTAGGAGCCTTGTGCTTCTTGGACTCAGAAGATGACCGCTTGGCATTCTGGTACAGCACCACCAGGCAGGCCATGGTGGCCAGCAAGGACCAATAGGCTAGGAGGTAGATGCGAGTTTCTGTGTAGAAGAGGAACTGAAGAAGCCAGAGCAGGGGGTTCCTACGAATGAGCCAGTGCAGCCAGGGCAGAACCACACCAAGGCCCAGCACACAGGTCATGAGGTGGAAGAAGATAGAAGAGGCCCAGGTGCCCGAATCCATGAAGACAAAGAGGGTGCTGAAAAAGACACCCATGAGCACCATCCCCACCACCACCACCAACAGGAAGAAGTCCACTGGGTC---CCCCTGGCTTTCA------GTCAGAGAGCGCTTGATGAGCTGGTTGAGGACGAAGCTAATGCCACCCAATACCAGCAGTGCCTCCCCAGGAGTGAAGCAGCGGGGCAGCAGGTACAGCAGGATCATGTTGAGATAAACGAATATTAGCAGGACTTCCAGGACCTCGATCACCTCGCCCACACTGAGCGAGTGCTTCATAATATAAATGATAATACCTCCGGCCAAACCCGAGATGGCACAAGTATTGGTGGGCACCGGGCGAGTAATGCCCAGTGCCAACACCGAGGAGAAGAGGGCCACTGCCATGCCAGTGGCTGCAACCACAATGCCGAAGCGCTCGAAGTATGGGTTCCCTGCAGTCAGGCAGCGCTCCTTCATGACCAGCCCAAGCAAAGGCATGACCATGGAGGCCGGTAGTAAGCCACTGTTCGCGGACATTCGGAACTGGAAAACAGCATTCCCCTGCTGGAGCAGCCGGTCCCACTTGTACTGGACGTAGAAGGCCTGCACTGCTAAGGCCACGGCGCACCAGGAGTATCGGTCCCACACTGCAGCGTGGATGCTCAGCACCACTGCGAACACCACTGCAGCCTCCGCCAGCACTGACCCGCTCAGCGCAAACCCAG
1323s canFam1.chr9           6365377 1515 -  53642819 CTAGGAGGGACA---CGATGCTGATAGAGCCCAAA--ATCCAAACATAACTGTAGTTTAGGTCCACTCCACTATCAAAGATTAAGATCAGAGCTACAGAAATGATCTGGGCAAATATAGAGGTCATGGTCCCCTCAAAGGTCTTTTTGGTTCCAGGCCAGTGGATTTCCCCCATTGTGCTGCCAAAAATGGAGGCCACAGTGTCCCCCACACCCACAGACAGGACTCCTGCATAAGGGACTAGGGCTCTTGCTCCCCCCAAGTTGCCCTTCTGTGTGCAGGGCCTGGGAACCAGCCAAATTGGAAGAGACATGCCCAAGAGCAGGTAGATATGTGTCAGGATGAGTGGTCCACTGTCTCGTTCATCTAAGAAAAGGGACAGGAGGCTCCTCAGAGTGTGGCCCAGGGGCTTGATGCGGAAATAGCGCACATATTCTAGGAAGATAAAGACTGTTAGGCATATGGTGGCAGCTACATAGAGCAGTGTCCGGTCAAGGATGATACCGGGGATGTAGGTGGCCACCACAATGAAGTGGAAATACTTTCGGGCAATGGTGGGGGCCTGGTGCTTCTTAGACTCAGAAGATGACCGCTTGGCATTCTGGTAAAGCACCACCAGGCAGGCTAAGGTGGCCAGCAGAGACCAGTAGACCAGGAGGTAGATGCGGGTCTCTTTCTGGAAGAGGAATTGAAGAAGCCAGAGCAGGGGGTTCTTGCGGATAAGCCGGTGCAGCCAGGGAAGGACCACGCCAAGGCCCAGCACACAAGTCATAAGGTGGAAGAAGATGGAGGAAGCCCAGGTACCTGAGTCCATGAAGACAAAGAGTGTGCTGAAGAAGACGCCCATAAGCACCATCCCTACTACCACCACCAGCAGGAAGAAATCCACTGGGTC---GCCCTGGCTCTCCACCACAGTCAGAGAACGCTTGATGAGCTGGTTGAGCATGAAGCTGATGCCACCTAATACAAGCAGTGCCTCCCCAGGGGTAAAGCAGCGGGGCAGCAGGTACAGCAGGATCATGTTGAGGTAGACGAAGATCAGCAGGACCTCCAGGACCTCGATCACCTCGCCCACACTCAGTGAGTGCTTCATGATATAAATGATGACACCTCCAGCCAAGCCTGAGATGACACAAGTGTTGGTGGGCACTGGGCGAGTGATGCCCAGTGCCAGTACCGACGAGAAGAGGGCCACTGCCATCCCAGTGGCTGCCACCACAATTCCAAAGCGCTCAAAATATGGGTTCCCCATGGACTGGCAGCGCTCCTTCATGACCAGTCCGAACAAAGGCATGACCATTGATGCGGGCAGCAGGCCACTGTTTGCGGACATGCGGAACTGGAAGACAGCGCTTCCCTGCTGCAGCAGCCGGTCCCACTTGTACTGGACGTAGAAGGCCTGCACTGCGAGAGCCACGGCGCACCACGAGTATCGGTCCCACACGGCTGCGTGGATGCTCAGCACCACTGCGAACACTACTGCTGCCTCCGCCAGCACTGACCCACTCAGCGGAGCCCCGG
1324s galGal2.chr17          5207321 1512 -  10632206 CCAAAAGAGAAA---CTAAGCTCACAGACACCAGA--ATCCAGGCATAGCTGGAGTTCAGGTTCACGCTGCTGTCAAAGATCAGAATAAGAGCCACAGCAATGATCTGAGCAAAAATTGCTGTCATTGTCCCTTCAAAGGTCTTCTTTGTGCCCGGCCATTTGATTTCCCCCATGGTACTGCCAAAAACAGAGGCCATGGTGTCTCCTACCCCTACTGCAAGCACCCCAGCATAGGGCACCAGTGCTCCTGCCCCAGACAAGGCACCTTTAGGGGCACAGGATCTGGGGAACAACCACACTGGGAGGGACATGCCAAGAAGAAGATAAATGTGAGTCAAGATTAGAGGCCCACTGTCTCTTTCATCCAAGAAGAGAGACAGCAAATAGCGAAGAGTTTGGCCAAACGGTTTGATCCTGAAGTACCGAATGTACTCTAAGAATATGAACACTGCCAGACACAGGACTGCAGCAACATGGAGAAGCTGGCGGTCATAAATTAGTCCAGGAACATAAGTTGCTACAACAATGAAATGGAAATACTTCCTGGTTATGGTTGAGGCCTGGTGTTTTTTAGATTCG---GACGATCTCTTGGCATTCTGGTAGAAAACTATGCCACACGCTGAAGCAGCCAATAAAGTCCAATATATGAGAAGGTAAACCCTCGTCTGTGTCTGAAACAGAAACTGGAGCAGCCAAAACAAAGGGTTCCTCCGGATCAGTCGGTAAAGCCAAGGCATGATGACCCCTAAGCCTAGCACTGCTGTCATCATGTGGAAAAACATGGAGGAGATCCACGTACCCGAATCCATGAAAATGAAGAGAACAGTGAAAAAAAGCCCAAGGATAACAACTCCAATAACTGCCACCAGAAGGAAGAAGTCTATGGGTTC---ACCTCTGCCCTCGATTACATTCAGTGAGCGTTTAATGAGCTGATTGAGAACAAAACTTATACCTCCGAGAACTAGCAATGCTTCTCCAGGAGTAAAACACCGAGGCAGCAGGTAGAGCAAGATCATACTGAGGTAGACAAAAATTAGCAGCACTTCTAGGACCTCTATCACTTCTGAAACAGTCAAAGAGTGCTTCATGGTATAGATAATTATACTGCCAGCAACACCACTGAGTATGCAGGTGTTGGTGGGCACAGGTTTTGTGATGCCAACAGCAATTACAGACAAAAATAGAGCAACCAACATGCCAGTGGAAGCTACAACTATGCCAAAGCGTTCAAAGTACACGATACCAGCAGCCTTGCACCTCTCCTTCATTGCTATCCCCAGCAAGGGGATGACCATGCTGGCAGGCAGGAGCCCACTGTTCGCTGTGGTGCGGAACTGGAACACAGCCCCCCCCTGCTGCAGCAGGCGGTCCCATTTAAACTGGACATAGAAAGCCTGGATGGCAAGAGCTACAGCACACCAGGAGTAGCGGTCCCACACCACTGCATGCACGCACAGAACGATGCTGAAGACGATCAGGGATTCCACCAGCACTGGTTTGTTTAACATGGTTCCAG
1325s fr1.chrUn            290357796 1512 - 349519338 CTAGCATTGCCA---CCAGAGTGATAGAACCAACA--ATCCAGGAGTAGCTGGAGTTCAGATTGATGCCAGTATCAAAGATTAGAAAGATGGCCACAGCAATAATCTGTGCAAACACAGATGTTGCAGTCCCCTCAATGGTTTTCTTAGTACCGGGCCAACGAATCTCTCCCATGGTGCTGCCAAACACAGATGCCACAGTATCTCCTACCCCGACAGCCAGGACACCTGCATATGGTATCAGCCCACCGGCACCAGGAAGTATTCCTTTTGGGGCACATGGTCCAGGGAACAGCCATATGGGAAGAGACATGCCCAAAAGGAGGTAAATGTGGGTCAGGATAAGAGGCCCAGAGTCCCGCTCATCCAGGAACAATGTAAGAACCTGTCTGAGCACCTGACCCAGTGGCCTGATCCGAAAGTAGCGCACGTACTCCAGGAACAAAAAGACTGCCAAGCAGCCAACAGAGGCCACATGGAGCAGGTGCCGGTCGTATATGAGACCTGGAACATAGGTGGCCACCACAATTAGATGGAAGTACTTCCGGACTACAGTCGAGGCTTGGTGTTTCTTGGACCCA---GACTGACGTTGATAGTTCTGGTGTAACACAACACAGGTGGCCAGGACCACCAGAAACACCCAGTATGCCAGCAGAGAGAGCCTTCTGTCAGTGAATGTGACAAAGTCCAGTAGCCACATGATGGGATGCCTGCCGATGAACAGGGATAGCCATGGCAACAGAATTCCCAGACTGAGAACGGCTGTCATGATGTGGAAAAAAACAGATGACACCCAGGTCTCTGATTCCATGAAGCAAAACAGCAGAGCAAAGAACACGCCCAGCAACAACGAGCCTACTACCACGACCGGCAGGAAATAATTTATTGGATC---GCCTTTGACCTCTGTCAAGTTCAGTGAGCGCTTGATAAGCTGGTTGACAATGAAACTGATTCCACCGATGATGAGAAGGGCTTCTCCGGGTGTGAAGCAGCGAGGCAGCAGGAAAAGCACGATCAGGCTGAGATAGACGAAGATCAACAACACCTCTAAGACTTCGATGACCTCAGACACCGTTAACGTCTGTTTCGTCATGTACAGAATTGCACTGGCGGCCATGCCTGCAATCACACAAGTGTTGGTGGGTACAGGTCTTGTAATGCCTAAGGCGATCAGGGAGAGGAACAGTGCCAGCATCATGCCGGTGATGGTGATGACCATGGAGAAGCGCTCGAGGTAAACGTTCCCTGATTCAGAGCACCTTAGTCTCAGCACCAAGCCCAGCAAAGGCATCACCATGGAGGCTGGGACGATGCCACTGTTTGCTGCTGGACGGAACTGGAACACGGCACCCCCCGACTTGAGCAAACGATCCCATTTGTGCTGAACGTAGAAAGCCTGGATGAAGAGTGCAATGCTGCACCAGGAATGCTGGTTCCACAGCACCATGTGGACCCACCCCACAATGGCAAAAACTATAGCGGACTCTACAAAGACTGGATTAATCTCCATTGCCACTG
1326s danRer1.chr21         12648479 1515 -  13488766 CCAACATGGCCA---CCATAGAGATGGATCCCACC--ACCCACGAGTAGCTGGCGTTCAGGTTAATACTGCTGTCGGCGATGAGGAAAACCACCACAGCGATAATCTGAGCGAACACAGAGGACGCCGTGCCCTCAAATGTCTTCTTAGTCCCAGGCCAGCGGATTTCACCCACGTTGCTGCCGAAAACGGATGCCACTGTGTCCCCGACCCCTACAGCAAGGACTCCAGCATAGGGTACTAGCCCACTAGCGCCCCCTAGGCCTCCTTTTGGGGTGCACATCCCAGGTGTCAACCACAGTGGAAGAGAAACGCCAAGAAGAAGATAAATATGAGTGAGAATAAGTGGTCCTGAATCTCTCTCATCAAGGAATAAGGTGAGAAGACGTCGAAGCGGAGCCCCGAATGGTCGAATGCGAAAATAGCGGACATATTCGAGAAACAAAAATGCAGAGAGGCAAACAACCGCAGACAAATGCAGCAAAGGACGATCCAGAGCGAGTCCGGGAGCGAAGGTTAAAACGGTGAGCAGGTGGAAATACTTCCGCACTGTCGTTGATGCTTGATGCTTCTTGCTGCCTGCAGAT---CGATGACTATTTTGATGCATCACAACGGCAACTGCTAGAAGCGCCAAAGCGGCCCAAAACCCAATGAGCCAAAGTCGAGTGTTTGATTCAGTGATGAAATGCATCAACCAAGTGATTGGATGGTGCTGCGTGAGTAGAGATAGCCAAGGAACCAATAACCCCAATCCCAAAACCGCAGTCATGGTATGGAAGAAGAGCGACGCTGACCAGGTTTCAGATTCCATGAATATAAAAAGCACGGCGAAGAATATTCCCAACAGCACTAACCCTAAAACAGCTACCGGGAGGAAATACGGAAGCGGGTCTGAGTTTGCATTTCCAGACGAAGCCAGAGAGCGCTTAATTAGCTGGTTGATGATAAAACTAATCCCGCCAAGGATCAGAAGGGCTTCGCCGGGGGTGAAGCAACGTGGAAGGAGGTACAGCAGGATTAAACTTAGATACACAAAAATCAGAAGCACCTCCAAGACTTCGATGACCTCAGACACTGTTAGTGTTTGCTTCACGGTGTACAGAATAGCACTACTAGCAATTCCGGCGATAACACAAGTGTTTGTTGGCACCGGCCGCGTGATTCCCAATGCGATGAGCGAGAGGAATAGAGCCAACATCATTCCGATTACTGTGATGACCATTGCGAATCGCTCCATGTAGACGTTTCCCACAGCGAGGCAGCGGCCTCGTAGGGTGAGTCCCAGTAGTGGCAGCACCATACTGGCTGGCAGGACGCCGCTGTTGGCTGAAGGACGAAACTGGAAGACGGCGGCACCAGAGCGAATCAGACGATCCCATTTGTGCTGCACATAAAAAGCCTGGACGGCCAATGCCATGCAGCACCAGGACAGCTGATTCCACACGGCCATGTGTACGGAAACCACCATGGCGAACACCACCGCAGATTCAACCAGCACTGGATCCATCTGCATGACTGCAG
1327
1328a score=491.0
1329s hg17.chr9            128789102 2 + 138429268 GC
1330s panTro1.chr11_random  46300337 2 -  53199993 GC
1331s mm5.chr2              30246026 2 + 181686250 AC
1332s rn3.chr3               9331684 2 + 170969371 AC
1333s canFam1.chr9           6366892 2 -  53642819 GG
1334s galGal2.chr17          5208833 2 -  10632206 TC
1335s fr1.chrUn            290359308 2 - 349519338 GC
1336
1337a score=-383.0
1338s hg17.chr9            128789104 1 + 138429268 C
1339s panTro1.chr11_random  46300339 1 -  53199993 C
1340s mm5.chr2              30246028 1 + 181686250 T
1341s rn3.chr3               9331686 1 + 170969371 T
1342s canFam1.chr9           6366894 1 -  53642819 A
1343s galGal2.chr17          5208835 1 -  10632206 C
1344
1345a score=46199.0
1346s hg17.chr9            128789105 31 + 138429268 CCGGGGCCGGAGATGGGCACTCTCGGGTCAT
1347s panTro1.chr11_random  46300340 31 -  53199993 CCGGGGCCGGAGATGGGCACTCTCGGGTCAT
1348s mm5.chr2              30246029 25 + 181686250 CCTGG------GGAGGGCACTGTCGGGTCAT
1349s rn3.chr3               9331687 31 + 170969371 CCGGGGCTTGGGGAGGGCACTGTCGGGTCAT
1350s canFam1.chr9           6366895 25 -  53642819 CCGGG------GGAGCGTGCTCTCGGGTCAT
1351
1352a score=145262.0
1353s hg17.chr9            128882427 96 + 138429268 ATGGCGTTCCGGAGGGCCGAGGGCACGTCTATGATCCAGGCCCTGGCCATGACGGTGGCCGAGATCCCCGTGTTCCTGTACACGACGTTTGGGCAG
1354s panTro1.chr11_random  46393737 96 -  53199993 ATGGCGTTCCGGAGGGCTGAGGGCACGTCTATGATCCAGGCCCTGGCCATGACGGTGGCCGAGATCCCCGTGTTCCTGTACACGACGTTTGGGCAG
1355s mm5.chr2              30327714 96 + 181686250 ATGGCATTCCGGAGGACTGAGGGTATGTCCATGATCCAGGCTCTGGCCATGACTGTGGCTGAGATTCCAGTGTTCCTGTACACAACTTTTGGTCAG
1356s rn3.chr3               9412966 96 + 170969371 ATGGCATTCCGTAGGACTGAGGGTATGTCCATGATCCAGGCTCTGGCCATGACTGTGGCTGAGATACCAGTGTTCCTGTACACGACTTTTGGTCAG
1357s canFam1.chr9           6452102 96 -  53642819 ATGGCATTCCGGAGGACTGAGGGCATGTCCATGATCCAGGCACTGGCCATGACGGTGGCCGAGATCCCTGTGTTCCTGTATACAACGTTTGGGCAG
1358s fr1.chrUn            120365676 96 + 349519338 ATGTCACTCAGACAAGCGGAAGGGATGTCCATTGCCCAGGCTTTGGCAATGACGGTAGCAGAGATCCCAGTGTTCCTTTATTCCACGTTTGGACAG
1359s danRer1.chrNA         88880074 96 + 390413307 ATGTCATTCAGAAGTGCAGAGGGCGTGTCCATCATGCAGGCCTTGGCCATGACTGTGGCTGAGATACCTGTGTTTCTCTATTCCACCTTTGGGCAG
1360
1361a score=359580.0
1362s hg17.chr9     128937229 216 + 138429268 TCAGAGCTTGGCCCGG---GGGTGGCTCTGCAGCAGGGCACGCATGTCCAGGAGCGCCTTCTCCAGGTAATGCGCCAGGCGGGCGGCGTTGGTCTCCGCGCAGCTGTTGTAGGCCGACAGGGAGAAGTTGATGTGGGCCTCCATGGGGTTATAGCAGACACCGTAGCCGTCGGGGACCACGGGCCCGAAGAACATGACACAGTCTGTCTTGGCAGGGAC
1363s panTro1.chr11 113780157 216 + 123086034 TCAGAGCTTGGCCCGG---GGGTGGCTCTGCAGCAGGGCACGCATGTCCAGGAGCGCCTTCTCCAGGTAATGCGCCAGGCGGGCGGCGTTGGTCTCTGCGCAGCTGTTGTAGGCCGACAGGGAGAAGTTGATGTGGGCCTCCATGGGGTTATAGCAGACACCGTAGCCGTCGGGGACCACGGGCCCGAAGAACATGACACAGTCTGTCTTGGCAGGGAC
1364s mm5.chr2       30362600 216 + 181686250 TCAGAGCTTGGCCCTG---GGGTGGTTCTGGAGTAGGGTGCGCATGTCCAGCAGAGCTTTCTCCAAGTAGTGAGCCATGCGGGCAGCGTTGGTCTCAGCACAGCTGTTGTAGGCTGACACGGAGAAGTTGATATGGGCCTCCATGGGGTTGTAGCAGATGCCATAACCATCTGGGACCACAGGTCCGAAGAACATGACACAGTCTGTCTTGGCAGGGAC
1365s rn3.chr3        9448511 216 + 170969371 TCAGAGCTTGGCCCTG---GGGTGGTTCTGGAGTAAGGTGCGCATGTCCAGCAGAGCTTTCTCCAAGTAGTGAGCCATGCGGGCAGCGTTGGTCTCAGCACAGCTGTTGTAGGCTGACACGGAAAAGTTGATATGGGCCTCCATGGGATTGTAGCAGATGCCGTAACCGTCTGGGACCACAGGTCCGAAGGACATGACACAGTCTGTCTTGGCAGGGAC
1366s canFam1.chr9    6500360 216 -  53642819 TCACAGCTTGGCCCGA---GGGTGACTCTGCAGCAGAGCGCGCATGTCCAGGAGTGCCTTCTCCAGGTAGTGCGCCAGGCGGGCTGCATTGGTCTCGGCACAGCTGTTGTAGGCTGACACAGAGAAGTTGATGTGCGTCTCCATGGGGTTGTAGCACACGCCATAGCCGTCTGGGACCACGGGCCCAAAGAACATGACGCAATCTGTCTTGGCAGGGAC
1367s galGal2.chr17   5301443 216 -  10632206 TTACAGTTTGGATTTG---GGGGTAGATTGGAGCAAGCTTCTCATGTCTAGCAGTGCTTTCTCAAGATAATGTGCCATGCGAGCTGCATTTGTGTCAGCACAGCTGTTGAATGCTGAAATGGCAAAGTTGATGTGTTCATCCATAGGGTTGTAACAGATTCCATAGCCATCTGGAACCACGGGACCAAAACACATCACACAGTCTGTCTTTGCTGGGAC
1368s fr1.chrUn      47430687 219 + 349519338 TCACTGCTGGGCCGTGGCTGCGGCATCTTCCAGGAGAGCTCTCATGTCCAACAGGGCGCCCTCTACAGCCTGGGCGAAGCGAGCGGCGTTGGTCTCCTCACAGCTGTTGAAGGCCGTGATGGCCACGTTGATGTGCTCCTCCATGGGATTGTAACACACGCCGTAACCGTCTGGCACCATCGGACCAAAGCACATCACGCAGTCTGTCTTCGAGCCGAC
1369s danRer1.chr8    1065541 216 -  36410523 TTAAAGCTTGGCTCTG---GGTGTCTGCTCCAGCAGGGTCCTCATGTCCAGCAGAGCGTCCTCCAGACCCTGAGCCAGACGGACAGCATTTGTGTCCTGGCAGCTGTTGAACGCAGATACTGCAAAGTTAATGTGGGTATCCATGGGATTGTAGCATACGCCATAACCATCAGGCACCACCGGCCCAAAGCACATCACACAGTCAGTTTTAGCTGGCAC
1370
1371a score=134850.0
1372s hg17.chrX     122745047 138 + 154824264 ATGACTTTTAACAGTTTTGAAGGATCTAAAAC----TTGTGTACCTGCAGACATCAATAAGGAAGAAGAATTTGTAGAAGAGTTTAATAGATTAAAAACTTTTGCTAATTTTCCAAGTGGTAGTCCTGTTTCAGCATCAACA-
1373s panTro1.chrX  126858618 138 + 160174553 ATGACTTTTAACAGTTTTGAAGGATCTAAAAC----TTGTGTACCTGCAGACATCAATAAGGAAGAAGAATTTGTAGAAGAGTTTAATAGATTAAAAACTTTTGCTAATTTTCCAAGTGGTAGTCCTGTTTCAGCATCAACA-
1374s mm5.chrX       34442683 138 + 160634946 ATGACTTTTAACAGTTTTGAAGGAACTAGAAC----TTTTGTACTTGCAGACACCAATAAGGATGAAGAATTTGTAGAAGAGTTTAATAGATTAAAAACATTTGCTAACTTCCCAAGTAGTAGTCCTGTTTCAGCATCAACA-
1375s rn3.chrX      157748736 138 - 160775580 ATGACTTTTAACAGTTTTGAAGGATCTAGAAC----TGTTGTACCTGCAGACACCAATAAGGATGAAGAATTTGTAGAAGAGTTTAATAGATTAAAAACATTTGCTAACTTCCCAAGCAGCAGTCCTGTTTCAGCATCAACA-
1376s canFam1.chrX   98422419 138 + 126913094 ATGACTTTTAACAGTTTTGAAGGAGCTAAAAC----TTGTGTACCTGCAGGCATCAATAAGGATGAAGAATTTGTAGAAGAGTTTAATAGATTAAAAACTTTTGCTAATTTTCCAAGTAGCAGTCCTGTTTCAGCATCAACG-
1377s galGal2.chr4   75226910 138 -  90634903 ATGACGTGTAATGGCCCAGATAGCTCTGAATC----TGGTGCCACTCCAGCCACTGACGGTGACCAGGAGTGGACACAGGAACACTACCGACTAGGAACCTTTGTGGAGTTTCCCCATGATTGTCCAGTTTCAGCATCAGCG-
1378s danRer1.chr14  14605069 142 -  34612130 TTTAGTTACTACAAATATGGCACACTCAACTCATAATGGCGAATTGGAATCTGACAATGTGGCAGCTGATTGGTCAGTCATGAAGAATCGGGTGAACTCTTTTCAACGTTTTCCATATTCTGAAGACATTTCAGCA-CAGCGG
1379
1380a score=158991.0
1381s hg17.chrX     122745185 115 + 154824264 CTGGCACGAGCAGGGTTTCTTTATACTGGTGAAGGAGATACCGTGCGGTGCTTTAGTTGTCATGCAGCTGTAGATAGATGGCAATATGGAGACTCAGCAGTTGGAAGACACAGGA
1382s panTro1.chrX  126858756 115 + 160174553 CTGGCACGAGCAGGGTTTCTTTATACTGGTGAAGGAGATACCGTGCGGTGCTTTAGTTGTCATGCAGCTGTAGATAGATGGCAATATGGAGACTCAGCAGTTGGAAGACACAGGA
1383s mm5.chrX       34442821 115 + 160634946 TTGGCGCGAGCTGGGTTTCTTTATACCGGTGAAGGAGACACCGTGCAATGTTTCAGTTGTCATGCGGCAATAGATAGATGGCAGTATGGAGACTCAGCTGTTGGAAGACACAGGA
1384s rn3.chrX      157748874 115 - 160775580 TTGGCGCGAGCGGGGTTTCTCTACACTGGTGAAGGAGACACCGTGCAGTGTTTCAGTTGTCACGCGGCAGTAGATAGATGGCAGTATGGAGACTCAGCTGTTGGAAGACACAGGA
1385s canFam1.chrX   98422557 115 + 126913094 TTAGCACGAGCTGGTTTTCTGTATACTGGTGAAGGAGATACTGTGCGGTGCTTTAGTTGTCATGCATCAATAGATAGATGGCAATATGGAGACTCAGCAGTTGGAAGACACAGGA
1386s galGal2.chr4   75227048 115 -  90634903 CTAGCTCGAGCTGGCTTTGTTTATACTGGAGAAGGTGATAAAGTCAAGTGCTTCAGTTGCCATGTAACTGTTGAAGGATGGGAGCCTGGGGATTCTGCAATTGACAGACACAAAA
1387s fr1.chrUn     143073633 115 - 349519338 CTGGCCCGGGCCGGCTGGTTCTACACGGGGGTGGGCGACCGCGTGCAGTGTTTCAAGTGCAACGTGACAGCCGAGGGCTGGCAGGCTGGAGACTGTCCCACCGAAAAACACAGGC
1388s danRer1.chr14  14605211 115 -  34612130 CTGGCCCGAGCGGGCTTTTACTTCACAGGCGAGGGGGACAGGGTGCAATGTTTCAGCTGCAGTGCCACTGTGCAGAACTGGAACAGAGGTGACACCCCATTGGAGAGACATCAAC
1389
1390a score=509291.0
1391s hg17.chrX     122745300 448 + 154824264 AAGTATCCCCAAATTGCAGATTTATCAACGGCT---TTTATCTTGAAAATAGTGCCACGCAGTCTACAAATTCTGGTATCCAGAATGGTCAGTACAAAGTTGAAAACTATCTGGGAAGCAGAGAT---------CATTTTGCCTTAGACAGGCCATCTGAGACACATGCAGACTATCTTTTGAGAACTGGGCAGGTTGTAGATATATCAGACACCATATACCCGAGGAACCCTGCCATGTATAGTGAAGAAGCTAGATTAAAGTCCTTTCAGAACTGGCCAGACTATGCTCACCTAACCCCAAGAGAGTTAGCAAGTGCTGGACTCTACTACACAGGTATTGGTGACCAAGTGCAGTGCTTTTGTTGTGGTGGAAAACTGAAAAATTGGGAACCTTGTGATCGTGCCTGGTCAGAACACAGGCGACACTTTCCTAATTGCTTCTTTGTTTTGGGCCGGAA
1392s panTro1.chrX  126858871 448 + 160174553 AAGTATCCCCAAATTGCAGATTTATCAACGGCT---TTTATCTAGAAAATAGTGCCACGCAGTCTACAAATTCTGGTATCCAGAATGGTCAGTACAAAGTTGAAAACTATCTGGGAAGCAGAAAT---------CATTTTGCCTTAGACAGGCCATCTGAGACACATGCAGACTATCTTTTGAGAACTGGGCAGGTTGTAGATATATCAGACACCATATACCCGAGGAACCCTGCCATGTATAGTGAAGAAGCTAGATTAAAGTCCTTTCAGAACTGGCCAGACTATGCTCACCTAACCCCAAGAGAGTTAGCAAGTGCTGGACTCTACTACACAGGTATTGGTGACCAAGTGCAGTGCTTTTGTTGTGGTGGAAAACTGAAAAATTGGGAACCTTGTGATCGTGCCTGGTCAGAACACAGGCGACACTTTCCTAATTGCTTCTTTGTTTTGGGCCGGAA
1393s mm5.chrX       34442936 448 + 160634946 GAATATCCCCAAATTGCAGATTTATCAATGGTT---TTTATTTTGAAAATGGTGCTGCACAGTCTACAAATCCTGGTATCCAAAATGGCCAGTACAAATCTGAAAACTGTGTGGGAAATAGAAAT---------CCTTTTGCCCCTGACAGGCCACCTGAGACTCATGCTGATTATCTCTTGAGAACTGGACAGGTTGTAGATATTTCAGACACCATATACCCGAGGAACCCTGCCATGTGTAGTGAAGAAGCCAGATTGAAGTCATTTCAGAACTGGCCGGACTATGCTCATTTAACCCCCAGAGAGTTAGCTAGTGCTGGCCTCTACTACACAGGGGCTGATGATCAAGTGCAATGCTTTTGTTGTGGGGGAAAACTGAAAAATTGGGAACCCTGTGATCGTGCCTGGTCAGAACACAGGAGACACTTTCCCAATTGCTTTTTTGTTTTGGGCCGGAA
1394s rn3.chrX      157748989 448 - 160775580 GAATATCCCCAAATTGCAGATTTATCAATGGTT---TTTATTTTGAAAACGGTGCCACACAGTCTACATCTCCTGGCATCCAAAATGGCCAGTACAAATCTGAAAACTGTGTGGGAAACAGAAAT---------CATTTTGCTCTTGACAGGCCGTCGGAGACTCATGCAGATTATCTCCTGAGAACTGGACAGGTTGTAGATATTTCAGATACCATATACCCGAGGAACCCGGCCATGTGTAGTGAAGAAGCCAGACTGAAGACGTTTCAGAACTGGCCAGACTATGCCCATTTAAGCCCCAGAGAGTTAGCTAGTGCTGGACTCTACTACACGGGGATTGATGATCAAGTGCAATGCTTTTGTTGTGGTGGAAAACTGAAAAATTGGGAACCCTGTGACCGTGCCTGGTCAGAGCACAGGAGACACTTTCCCAACTGCTTCTTCGTTTTGGGCCGGAA
1395s canFam1.chrX   98422672 448 + 126913094 AAGTATCCCCAAATTGCAGATTTATCAATGGCT---TTTATTTTGAAAACACTGCTGCACAACCTACAAATCCAGGTATCCAAAATGGTCAATATAATGCAGAAAACTATCTGAGAAACAGAGAT---------CATTTTGTTTTAGACAGACCATCTGAGACTCATGCAGATTATCTTTTGAGAACTGGACAGGTCGTAGATATATCAGACACCACATACCCGGAGAACCCTGCCATGTATAGTGAAGAAGCTAGATTAAACTCATTTCAGAACTGGCCAGACTATGTCCACTTGACCCCAAGAGAGTTAGCTAGTGCTGGATTCTACTACACAGGTATTGACGATCAAGTGCAGTGCTTTTGTTGTGGTGGAAAACTGAAAAATTGGGAACCGTGTGATAATGCATGGTCAGAACACAGGCGACACTTTCCTAATTGCTTCTTTGTTCTGGGCCGGAA
1396s galGal2.chr4   75227163 442 -  90634903 ACCTTTCCCCAGATTGCAGATTTATTACTGGGTCTGCTTTTTTGGAAAATAACG------------TACATCCTCTTGTGCAGAGCCACCAGCATAGAACTGAAAAT------GGCTCCAGCAATTTGGCCCTCCCCTCTGCTCTGGAGGACTTGTCTGATGTGGAGGCAGATTACCTGTTGAGAACCAGGCAGGTTGTGGACATGTCCGATACTTTGTATCCTAAAAACCCTGCTATGTGCAGTGAAGAAGCCAGGCTGAAGTCCTTTCACAATTGGCCCCCCTATGGCCTATTGACGCCAAAGGAATTAGCTAGTGCAGGACTCTACTATACAGGTGTTGGTGATCAAGTTGCATGTTTCTGTTGCGGTGGAAAACTGAAAAACTGGGAACCTGGTGATCGAGCTTGGTCTGAGCACAAGAGGCATTTTCCCAAATGCTTTTTTGTCCTGGGTCGGGA
1397s fr1.chrUn      74286897 397 + 349519338 AGGTTTCTCCATTTTGCAAATTTCTCAGTTGTA---TTTATC---GAACCAGTTCCAATC------CGATTCCTGGCA-CCTCACTGACGA--ACGGCTCTGCCTACAATG-AAGAAGCAGAAGA---------TAT--------------------------------GGAATATCGTCTGAGAACAGGACAGGTGGTCGAT------GAGTCCATTTATCCAGTGGTCCCTCATATGAGGAGTGAAGAAAGCCGGCTTCACACCTTTTCTACGTGGCCCTTGACTGCACCAGTGAGCCCGTGCGATCTGGCCCAAGCTGGCCTTTACTACTTAGGGCAGTGTGACCAGGTTCAGTGTTTCTGCTGTGGTGGCACACTGGCTGACTGGGAAATCGGGGATTCCGCCTGGGCAGAACACAGCAAACATTTCCCTTTCTGCTTTTTCATCCTGGGGCACGA
1398s danRer1.chr14  14605326 382 -  34612130 TGGCATCTCCGGACTGCAGGTTCCTCAGCTGTG---CTCATGGTATGAGAAACT------------CTAATTCG---ATCCAGAGTCCTGATTACGATG-------------AAGAGGCCGAGAA---------TAG--------------------------------AGAGTTCCTCCTCCGCACGGGAGAGGTGGTGGAC------GAGTCCATGTATCCTGTTGTACCGCACATGAAGAGTGAAGAAGCGCGACTGAGTACTTTCAACAACTGGCCAGCAGACTCTCCAGTTCGGCCTGAAGACCTGGCAGAAGCAGGGATGTATTACATTGGGATAGACGACAATGTGCAGTGCTTCTGTTGCGGAGGGGGTCTGAGTGGATGGGAGCAAGGCGACGATCCTTGGAGTGAACATGCGAAGTACTACTCAAACTGCTTCTTCTTCTTGGGCCACAA
1399
1400a score=18792.0
1401s hg17.chrX    122745748 22 + 154824264 TCTT---AATATTCGAAGTGAATCT
1402s panTro1.chrX 126859319 22 + 160174553 TCTT---AATATTCGAAGTGAATCT
1403s mm5.chrX      34443384 22 + 160634946 CGTT---AATGTTCGAAGTGAATCT
1404s rn3.chrX     157749437 22 - 160775580 TGTT---AATGTTCGAAGTGAGTCT
1405s canFam1.chrX  98423120 22 + 126913094 TGTT---AATATTCGAAGTGAATCT
1406s galGal2.chr4  75227605 25 -  90634903 CGTTGGAAATGTTTCAACTGATTCT
1407s fr1.chrUn     74287294 16 + 349519338 TGTTGGCAATAT---------ACCT
1408
1409a score=0.0
1410s hg17.chrX 122745748 27 + 154824264 TCTTAATATTCGAAGTGAATCTGATGC
1411
1412a score=-3673.0
1413s hg17.chrX    122745770 5 + 154824264 GATGC
1414s panTro1.chrX 126859341 5 + 160174553 GATGC
1415s mm5.chrX      34443406 2 + 160634946 GG---
1416s rn3.chrX     157749459 2 - 160775580 GG---
1417s canFam1.chrX  98423142 5 + 126913094 GATGT
1418s galGal2.chr4  75227630 5 -  90634903 ATCTG
1419
1420a score=43762.0
1421s hg17.chrX     122745775 54 + 154824264 TGTGAGTTCTGATAGGAATTTCCCAAATTCAACAAAT--CTTCCAAGAA-----ATCCATC
1422s panTro1.chrX  126859346 54 + 160174553 TGTGAGTTCTGATAGGAATTTCCCAAATTCAACAAAT--CTTCCAAGAA-----ATCCATC
1423s mm5.chrX       34443408 54 + 160634946 TGTGAGTTCTGATAGGAATTTCCCAAATTCAACAAAC--TCTCCAAGAA-----ATCCAGC
1424s rn3.chrX      157749461 54 - 160775580 TGTGAGTTCAGATAGGAATTTCCCAAATTCAACAAAT--TCTCCAAGAA-----ATCCAGC
1425s canFam1.chrX   98423147 54 + 126913094 TGCGAGTACTGATAGGAACGTCCCAAATTCAACAAGT--ATTCCAGAAA-----ATCCAGC
1426s galGal2.chr4   75227635 54 -  90634903 TGCTGAGCTTGGGAGAAGCTGTCTAAA--CAACGAACAGCATCCAAGGA-----ATCCATC
1427s danRer1.chr14  14605708 50 -  34612130 TGTGGGC---------AACGTCCCCCTGACAACACCT--AGGCCAAGGGCTAATGTCCACC
1428
1429a score=105732.0
1430s hg17.chrX     122745829 95 + 154824264 CATGGCAGATTATGAAGCACGGATCTTTACTTTTG-GGACATGGATATACTCAGTTAACAAGGAGCAGCTTGCAAGAGCTGGATTTTATGCTTTAG
1431s panTro1.chrX  126859400 95 + 160174553 CATGGCAGATTATGAAGCACGGATCTTTACTTTTG-GGACATGGATATACTCAGTTAACAAGGAGCAGCTTGCAAGAGCTGGATTTTATGCTTTAG
1432s mm5.chrX       34443462 95 + 160634946 CATGGCAGAATATGAAGCACGGATCGTTACTTTTG-GAACATGGACATCCTCAGTTAACAAGGAGCAGCTTGCAAGAGCTGGATTTTATGCTTTAG
1433s rn3.chrX      157749515 95 - 160775580 CATGGCAGAATATGACGCACGGATCGTTACTTTTG-GAACATGGCTATACTCAGTTAACAAGGAGCAGCTTGCAAGAGCTGGATTTTATGCTTTAG
1434s canFam1.chrX   98423201 95 + 126913094 CATGGCAGATTATGAAGCACGGATCGTTACTTTTC-GGATGTGGATGTGTTCAATTAACAAGGAGCAACTTGCAAGAGCTGGATTTTATTCTTTAG
1435s galGal2.chr4   75227689 95 -  90634903 CATGGCAGAATATGAGAGGCGGATACAAACATTTT-TAGCTTGGATATACCCTGTTAACAAGGAACATCTTGCTGAAGCAGGGTTCTACAGCACAG
1436s fr1.chrUn      74287369 95 + 349519338 CATGGGGACATTTGAGGAAAGGCTGAGGAGTTTTGCTGGTGTCAAC-CACCCTCTAAACATAGAGAGGCTTGCGAGAGCTGGCTTCTACAGCAATG
1437s danRer1.chr14  14605759 95 -  34612130 TACAGACACTTTTGAGGGGCGTCTTGATAGCTTCA-AAGGCAGACAGCATCCCATTGACCCTGAGAGATTGGCCAGAGCTGGTTTCTACAGCACAG
1438
1439a score=-8579.0
1440s hg17.chrX     152648964 14 + 154824264 CTATTCTAGGGCCA
1441s panTro1.chrX  157964696 14 + 160174553 CTATTCTAGGGCCA
1442s mm5.chrX       65413418 14 + 160634946 CTATTCTAGGGCTA
1443s rn3.chrX      159861438 14 + 160775580 CTATTCTAGGGCTA
1444s canFam1.chrX  124765428 14 + 126913094 CTACTCTAGGGCCC
1445s galGal2.chr26   3679526 14 -   4255270 CTACGCTAATGAGT
1446s fr1.chrUn     230132755 14 - 349519338 TTAGACGAATGAGT
1447s danRer1.chr10  12185566 12 +  25436222 -TGGGCGGAGGCA-
1448
1449a score=283274.0
1450s hg17.chrX     152648978 218 + 154824264 CGGCAGGGTTGATGGGGGAAGTGGCCCCTGAGCTGT-CATTGCCCCCTGCCGCCTCCTTCTCCTTCTTGCCACTGTACTGGCCAATGAACGAACCATCCTCGTTGAACTGAACATCCA---CGCTGCCCCCATAATCGGCCAGGCTGTCGTCACTGCCCAGGGGCTTGATGTCCCCGTTGAGCGATGGCTGGCT-GCTGCCAAAGGCCTTCTCCTCGTTGTCA
1451s panTro1.chrX  157964710 218 + 160174553 CGGCAGGGTTGATGGGGGAGGTGGCCCCTGAGCTGT-CATTGCCCCCTGCCGCCTCCTTCTCCTTCTTGCCACTGTACTGGCCAATGAACGAACCATCCTCGTTGAACTGAACATCCA---CGCTGCCCCCATAATCGGCCAGGCTGTCGTCACTGCCCAGGGGCTTGATGTCCCCGTTGAGCGATGGCTGGCT-GCTGCCAAAGGCCTTCTCCTCGTTGTCA
1452s mm5.chrX       65413432 218 + 160634946 CTGCAGGATTGATAGGAGAGGTAGCCCCTGAACTGT-CATTGCCTCCTGCTGCCTCCTTCTCTTTCTTGCCACTGTACTGGCCGATGAAAGAGCCATCCTCATTGAACTGGACGTCCA---CACTGCCCCCATAATCAGCCAGGCTGTCATCACTGCCTAGGGGTTTGATGTCTCCGTTGAGAGATGGCTGGCT-GCTGCCAAAGGCCTTCTCTTCATTGTCA
1453s rn3.chrX      159861452 218 + 160775580 CTGCAGGATTGATAGGAGAGGTAGCCCCTGAGCTGT-CATTGCCTCCCGCTGCCTCCTTCTCTTTTTTGCCACTGTATTGGCCGATGAAAGAGCCATCCTCATTGAACTGGACATCCA---CACTGCCCCCATAATCAGCCAGACTGTCATCACTGCCTAGGGGTTTGATGTCTCCATTGAGAGATGGCTGGCT-GCTGCCGAAGGCCTTCTCTTCATTGTCA
1454s canFam1.chrX  124765442 218 + 126913094 CGGCAGGGTTGATGGGGGAGGCGGCCCCTGAGCTGT-CGTTGCCGCCTGCTGCCTCCTTCTCCTTCTTGCCGCTGTACTGGCCGATGAAGGAGCCGTCCTCGTTGAACTGCACGTCCA---CGCTGCCCCCGTAGTCGGCCAGGCTGTCGTCACTGCCCAGGGGCTTGATGTCCCCATTGAGGGACGGCTGGCT-GCTGCCAAAGGCCTTCTCCTCGTTGTCA
1455s galGal2.chr26   3679540 218 -   4255270 AGATAGCATTGACTGGGGACGTGGCTTCTGAGCTCT-CGTTGCCTTCCGTTTCCTCCTTGTCCTTTTTCACTGTGTACTGGCCAATGAAGGAGCCGTCCTCGTTGAACTGCCCTTCCC---CACCCTCTCCGTAGTCCACCAAGCTGTCGTCACTCTCCTGTTGCTTTATCGTGCCATCCAGGGAGGTCTGACT-GTTGGGCAGTGGTTTGTTGTCTTCATCG
1456s fr1.chrUn     329627114 209 - 349519338 CGGCAGGGTTGAGGGGGGAGTTGTCCGGTACGCCGTGGAACGGCTCCGGCC-------CCTCGCTGTGGCGGCTGAACTGGCTGGCCAGGGACTCGTCCATGTTGAGCTCCGTGGTTACGGCGCTGCTGCCGTTGAAGTCCAGGTTGTCCTCGCTGCACA---GCTTGCTGTCCTCGCCCAGCGAAGGCTGGCTGGCTGT----GCGCTTCTCTTCGAGGTCA
1457s danRer1.chr10  12185578 200 +  25436222 TGTTGGGGTTGACCGGCGACACGGCGCCAGAGCTGT-CGTGCCCGCGTG---------GATCCCTTCGACCGCTGTACTGCCCGATGAAGGAGCCGTCCTCATTGAACTGGATGTCCA---CGCTGTCCCCGTAATCCGCCAGACTGTCGTTGCTGCT---GCGCTTGCTCTCGCACCC---CGACGGCTGGCT-GATGG---AGCACTTCTCCATATCACTG
1458
1459a score=102002.0
1460s hg17.chrX    152691446 25 + 154824264 ATGCTCATGGCGTCCACCACTTCCG
1461s mm5.chrX      65450627 25 + 160634946 ATGATCCTGGTGTCTACCACGTCTG
1462s rn3.chrX     159897295 25 + 160775580 ATGCTCCTGGTGTCTACCGTGTCCG
1463s canFam1.chrX 124808548 25 + 126913094 ATGCTCCTGGCATCCACCACCTCGG
1464
1465a score=45779.0
1466s hg17.chrX     152694029 80 + 154824264 TCAGTGTG---GCTTGGGGGTCGTGTCTAGGCCCTGGGGGTGGGAAGCTGAGGGTGAGGCTGGGGCCCCAGGGCCCCGGGAGA
1467s panTro1.chrX  158011192 80 + 160174553 TCAGTGTG---GCTTGGGGGTCGTGTCTAGGCCCTGGGGGTGGGAAGCTGAGGGTGAGGCTGGGGCCCCAGGGCCCCGGGAGA
1468s mm5.chrX       65453119 80 + 160634946 TCAGACTG---GCTTGCGAGTTGAATCTGGACCCTGGGGATGGGAGGTTGAGGGGGAAATTGGAGCCCCAGGTCCCCGGGAGA
1469s rn3.chrX      159899770 80 + 160775580 TCAGACTG---GCTTGCGAGTTGAATCTGGACCCTGGGGATGGGAAACTGAGGGGGAAACTGGAGCCCCAGGTCCCCGGGAGA
1470s canFam1.chrX  124811065 77 + 126913094 TCAGT------GCTTAAGTGGAGAGTCCAGGCCCTGGGGATGGGACGCCGAGGGGGACGCCGGGGCCCCGGAGCCGCGGGAGA
1471s galGal2.chr26   3294210 66 -   4255270 TCAGGGCG---GCT--------------GCGCCATGGAACTGAAATGCACACCGTGCCCTGGCACCCCCATCACCCCTGGGGA
1472s danRer1.chrNA 128898465 70 + 390413307 CCAGACTGCAAGCACAGGGAGAGTGTCTGGCCCCCAGGGC-----AGCT--------CGCTGGGGCCAGAGAGCCTCTGGTGA
1473
1474a score=18883.0
1475s hg17.chrX     152694109 35 + 154824264 AGCCTTTGTTCCTGCCCAGGCGGCTGCTGGGCGGG
1476s panTro1.chrX  158011272 35 + 160174553 AGCCTTTGTTCCTGCCCAGGCGGCTGCTGGGCGGG
1477s mm5.chrX       65453199 35 + 160634946 AGACTTTGTTTTTGCTGATGCTGCTGCAGGCCAGG
1478s rn3.chrX      159899850 35 + 160775580 AGACTTTGTTTTTGCTGAAGCTGCTGCAGGCCAGG
1479s canFam1.chrX  124811142 35 + 126913094 AGCCTTTGCTCCTACCCAGGCGGCCGGAGGCCGGA
1480s galGal2.chr26   3294276 30 -   4255270 CATC----CCCCTGTCAGCACTGCT-CGGGGCGGG
1481
1482a score=7409.0
1483s hg17.chrX     152694144 26 + 154824264 GCCTTTGGGCTTCGGGGCCCAGGACT
1484s panTro1.chrX  158011307 26 + 160174553 GCCTTTGGGCTTCGGGGCCCAGGACT
1485s mm5.chrX       65453234 20 + 160634946 GGCGTCAGAGTT------CCTAGACT
1486s rn3.chrX      159899885 26 + 160775580 GGCTTCAGGTTTCGAGTTCCTAGACT
1487s canFam1.chrX  124811177 26 + 126913094 GGCTTCAGGCTGCAgggcccggggcc
1488s galGal2.chrUn  50576950 22 + 165033910 -GTTCTGAG---CGAGGAACAGCACC
1489
1490a score=24632.0
1491s hg17.chrX     152694170 31 + 154824264 GGGAGAGGTGGTAGATGCTGGCCCAAGGCCC
1492s panTro1.chrX  158011333 31 + 160174553 GGGAGAGGTGGTAGATGCTGGCCCAAGGCCC
1493s mm5.chrX       65453254 31 + 160634946 CGGGGAGGCTGTAGATGCTAACCCATGGCCC
1494s rn3.chrX      159899911 31 + 160775580 GGGGGAGGCTGTAGATGCTAGCCCATGGCCC
1495s canFam1.chrX  124811203 31 + 126913094 gggggagccggtggacgcgggccccgcgccc
1496s galGal2.chrUn  50576972 31 + 165033910 GGGAGAGGCGGCAGCGGCTGCCCCCGAGCTC
1497s fr1.chrUn     329777075 24 - 349519338 GGACGAGGAGGTGGAGGAAGGATC-------
1498
1499a score=47489.0
1500s hg17.chrX    152694201 49 + 154824264 TGGCGGACAGAGGTCTTTCCCAAGAGCTCCTTAAACACAGAGTCCATGT
1501s panTro1.chrX 158011364 49 + 160174553 TGGCGGACAGAGGTCTTTCCCAAGAGCTCCTTAAACACAGAGTCCATGT
1502s mm5.chrX      65453285 49 + 160634946 TGGCGGACAGCAGTCTTTCCCAAGAGCTCCTTAAACACAGAATTCATGT
1503s rn3.chrX     159899942 49 + 160775580 TGGCGGACAGCAGCCTTTCCCAAGAGCTCCTTAAACACAGAATCCATGT
1504s canFam1.chrX 124811234 49 + 126913094 tggcgggcggAGGTCTTTCCCAGGAGCTCCTTAAACACGGAATCCATGG
1505s fr1.chrUn    329777109 37 - 349519338 TGGCGTGTG------------AGGAGCTCCTTAAAAACAGAGTCCATGT
1506
1507a score=175616.0
1508s hg17.chrX    152694250 13 + 154824264 TCTGTGCCACAGC
1509s panTro1.chrX 158011413 13 + 160174553 TCTGTGCCACAGC
1510s mm5.chrX      65453334 13 + 160634946 TCTGTGCCACAGC
1511s rn3.chrX     159899991 13 + 160775580 TCTGCGCCACAGC
1512s canFam1.chrX 124811283 13 + 126913094 TCTGTGCCACAGC
1513
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