root/galaxy-central/test-data/branchlength_fasta_in.dat @ 3

リビジョン 2, 2.6 KB (コミッタ: hatakeyama, 14 年 前)

import galaxy-central
行番号 
1>hg17.chr7(+):26907301-26907310|hg17_0
2GTGGGAGGT
3>panTro1.chr6(+):28037319-28037328|panTro1_0
4GTGGGAGGT
5>mm5.chr6(+):52104022-52104031|mm5_0
6GTGGGAGGT
7>rn3.chr4(+):80734395-80734404|rn3_0
8GTGGGAGGT
9>canFam1.chr14(+):42826409-42826418|canFam1_0
10GTGGGAGGT
11
12>hg17.chr7(+):26907310-26907326|hg17_1
13AGTCAGAGTGTCTGAG
14>panTro1.chr6(+):28037328-28037344|panTro1_1
15AGTCAGAGTGTCTGAG
16>mm5.chr6(+):52104031-52104047|mm5_1
17AGTCAGAGTGTCTGAG
18>rn3.chr4(+):80734404-80734420|rn3_1
19AGTCAGAGTATCTGAG
20>canFam1.chr14(+):42826418-42826434|canFam1_1
21AGTCAGAGTGTCTGAG
22
23>hg17.chr7(+):26907326-26907338|hg17_2
24GTAGAAGACCCC
25>panTro1.chr6(+):28037344-28037356|panTro1_2
26GTAGAAGACCCC
27>mm5.chr6(+):52104047-52104059|mm5_2
28GTAGACGATGCC
29>rn3.chr4(+):80734420-80734432|rn3_2
30GTAGATGATGCG
31>canFam1.chr14(+):42826434-42826446|canFam1_2
32GTAGAAGACCCC
33
34>hg17.chr7(+):26907338-26907654|hg17_3
35GGGGAAGGAACGCAGGGCGAAGAGCTGGACTTCTCTGAGGAT---TCCTCGGCCTTCTCGT-----CGTTTCCTGG----CGGGGTGGCCGGAGAGATGGGCAAGAGACCCTCCTTCTCACGTTTCTTTTGCTTCATTCGGCGGTTCTGGAACCAGATCTTCACTTGGGTCTCGTTGAGCTGCAGGGATGCAGCGATCTCCACCCTGCGGGCGCGCGTCAGGTACTTGTTGAAGTGGAACTCCTTCTCCAGTTCCGTGAGCTGCTTGGTAGTGAAGTTGGTGCGCACCGCGTTGGGTTGACCCAGGTAGCCGTACTCTCCAACTTTCC
36>panTro1.chr6(+):28037356-28037672|panTro1_3
37GGGGAAGGAACGCAGGGCGAAGAGCTGGACTTCTCTGAGGAT---TCCTCGGCCTTCTCGT-----CGTTTCCTGG----CGGGGTGGCCGGAGAGATGGGCAAGAGACCCTCCTTCTCACGTTTCTTTTGCTTCATTCGGCGGTTCTGGAACCAGATCTTCACTTGGGTCTCGTTGAGCTGCAGGGATGCAGCGATCTCCACCCTGCGGGCGCGCGTCAGGTACTTGTTGAAGTGGAACTCCTTCTCCAGTTCCGTGAGCTGCTTGGTAGTGAAGTTGGTGCGCACCGCGTTGGGTTGACCCAGGTAGCCGTACTCTCCAACTTTCC
38>mm5.chr6(+):52104059-52104375|mm5_3
39GGAGAAGGGGCACTGGGCGAGGGGCTAGATTTCTCAGATGAT---TCTTCCGTTTTCTCAT-----CGCTGCCAGG----AGGAGTGGCAGGGGAGATGGGCAGGAGCCCCTCCTTCTCACGCTTCTTCTGCTTCATGCGGCGATTCTGGAACCAGATCTTCACCTGGGTCTCATTGAGCTGTAGGGACGCGGCAATCTCCACCCTGCGCGCTCGTGTAAGGTACTTGTTGAAGTGGAACTCCTTCTCCAGCTCTGTGAGCTGCTTGGTGGTGAAATTGGTGCGCACTGCGTTGGGTTGACCCACGTAGCCGTACTCTCCAACTTTCC
40>rn3.chr4(+):80734432-80734748|rn3_3
41GGAGAAGGGGCGCTGGGCGAGGAGCTGGATTTCTCAGATGAT---TCTTCAGTTTTCTCAT-----CGCTTCCAGG----AGGGGTGGCGGGTGAAATGGGCAAGAGCCCCTCTTTCTCGCGCTTCTTCTGCTTCATGCGGCGATTCTGGAACCAGATCTTCACCTGGGTCTCATTGAGTTGCAGGGACGCGGCTATCTCCACCCTGCGGGCTCTTGTTAGGTACTTGTTGAAGTGGAACTCCTTCTCCAGCTCTGTGAGCTGCTTGGTGGTGAAGTTGGTGCGCACTGCGTTGGGTTGACCCACGTAGCCATACTCTCCAACTTTCC
42>canFam1.chr14(+):42826446-42826762|canFam1_3
43GGAGACGGAATGCAGGGCGAGGAGCTGGATTTCTCTGAAGAT---TCCTCCGCCTTCTCCT-----CACTTCCTGG----CGGGGTGGCAGGGGAGATGGGCAAAAGGCCCTCTTTCTCTCGTTTCTTCTGCTTCATCCGGCGGTTCTGGAACCAGATCTTCACCTGGGTCTCGTTGAGCTGCAGGGATGCTGCGATCTCCACCCTGCGGGCGCGGGTCAGATACTTATTGAAGTGGAACTCCTTTTCCAGCTCGGTGAGCTGCTTGGTGGTGAAGTTGGTACGCACTGCATTCGGTTGACCCACGTAGCCGTACTCTCCAACTTTCC
44
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