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customTrack2.bed

リビジョン 2, 10.6 KB (コミッタ: hatakeyama, 14 年前)
import galaxy-central

行番号
1	chr2 36124 36160 GC_rich 29 +
2	chr2 36572 36711 (CCCCG)n 247 +
3	chr2 36610 36800 C-rich 392 +
4	chr2 37778 37853 GA-rich 206 +
5	chr2 38158 39025 L1PA10 6050 +
6	chr2 39034 39201 L1M4c 431 -
7	chr2 39235 39279 MIR 201 +
8	chr2 39436 40499 L1PA16 5353 +
9	chr2 40733 40949 L1M5 321 +
10	chr2 41007 41090 Charlie1 360 +
11	chr2 41090 41137 LTR45 532 -
12	chr2 41137 41554 MSTB 2312 +
13	chr2 41554 41696 LTR45B 626 -
14	chr2 41651 41716 MER5A1 236 -
15	chr2 41739 41815 LTR45 469 -
16	chr2 41852 41969 Charlie1 236 +
17	chr2 41987 42034 FLAM_C 702 +
18	chr2 42034 42445 MSTA 2481 +
19	chr2 42445 42548 FLAM_C 702 +
20	chr2 42565 42681 Charlie1 470 +
21	chr2 42761 42807 L2 185 -
22	chr2 42835 43469 L1M5 903 +
23	chr2 43469 43551 AluJ/FLAM 508 +
24	chr2 43626 43721 MER33 393 +
25	chr2 43770 43929 L1M5 262 +
26	chr2 44897 45496 LTR71B 1895 -
27	chr2 45970 46426 L1M2b 1705 +
28	chr2 46426 46670 THE1B 1704 -
29	chr2 46744 46941 MER52D 245 +
30	chr2 47216 47483 MER52D 1052 +
31	chr2 47484 48495 MER52D 4223 +
32	chr2 48495 49053 MER52-int 3942 +
33	chr2 49172 49903 MER52-int 5089 +
34	chr2 49932 50066 THE1B 735 -
35	chr2 50070 51136 L1M2b 3786 +
36	chr2 51136 51399 AluY 2214 +
37	chr2 51399 51727 L1M2b 3786 +
38	chr2 51719 52002 L1MA5 1983 +
39	chr2 52002 52275 AluJb 1906 +
40	chr2 52289 52336 (TAAA)n 423 +
41	chr2 52336 52400 L1MA5 1983 +
42	chr2 52400 52625 AluSq 1665 +
43	chr2 52625 52683 L1MA5 1983 +
44	chr2 52709 52837 FLAM_C 734 -
45	chr2 54453 54517 MER94 494 +
46	chr2 54517 54809 AluSx 2081 -
47	chr2 54809 54860 MER94 494 +
48	chr2 54866 54998 MIR3 332 +
49	chr2 59062 59093 AT_rich 31 +
50	chr2 60498 60560 MIRb 192 +
51	chr2 61205 61717 MLT1H 754 +
52	chr2 62079 62552 MLT1D 2121 +
53	chr2 62909 63061 MER67A 375 +
54	chr2 63742 64034 AluSx 1506 -
55	chr2 64185 64306 MLT1H 280 -
56	chr2 64641 65101 MER4A1 3135 +
57	chr2 66342 66707 THE1B 2550 -
58	chr2 66707 68238 MLT1H-int 3238 -
59	chr2 68240 68605 THE1B 2399 -
60	chr2 69792 69907 MIRb 240 +
61	chr2 69909 70264 MER4A1 2647 -
62	chr2 70452 70639 MIR 228 +
63	chr2 70876 71234 MLT1J1 575 -
64	chr2 72494 72620 L1ME3B 400 -
65	chr2 72645 73168 MER90a 2062 -
66	chr2 74780 74914 MIRb 213 +
67	chr2 74983 75046 MIR3 180 +
68	chr2 75251 75291 MIRm 198 -
69	chr2 75313 75430 MIRb 215 -
70	chr2 75652 75823 MIRb 225 +
71	chr2 77049 77357 AluJo 1747 +
72	chr2 77438 77474 AT_rich 22 +
73	chr2 77475 77811 L1MC4 683 -
74	chr2 77813 78125 L1MC4a 1528 -
75	chr2 78125 78408 AluJo 1550 +
76	chr2 78408 78515 L1MC4a 1528 -
77	chr2 78515 78553 (CA)n 342 +
78	chr2 78553 78726 L1MC4a 1528 -
79	chr2 79305 79613 L1MC4 506 +
80	chr2 80122 80210 L1MC4 231 +
81	chr2 80251 80559 L1MC 1036 +
82	chr2 80569 80809 L1PA7 11967 +
83	chr2 80809 82246 LTR12C 9549 +
84	chr2 82246 84045 L1PA7 11967 +
85	chr2 84045 85055 LTR5A 8123 +
86	chr2 85055 89392 L1PA7 20590 +
87	chr2 89556 89820 AluY 1994 +
88	chr2 90168 90462 L2 554 -
89	chr2 90462 90717 AluSx 1621 +
90	chr2 90717 90841 L2 554 -
91	chr2 91794 91832 AT_rich 24 +
92	chr2 92171 92375 MIRb 363 +
93	chr2 92468 93502 L1MA4A 4118 -
94	chr2 93497 96075 L1MA4A 11775 -
95	chr2 96408 97310 L1MA4A 9242 -
96	chr2 97310 97600 AluSx 2107 -
97	chr2 97600 99410 L1MA4A 9242 -
98	chr2 99671 99720 (GGAA)n 317 +
99	chr2 100500 100526 AT_rich 26 +
100	chr2 100790 100850 L1M5 226 +
101	chr2 101493 101736 MIRb 664 -
102	chr2 102084 102384 AluSx 2334 -
103	chr2 103029 103104 L2 287 +
104	chr2 103525 103696 L3 282 -
105	chr2 103888 104191 AluSx 2269 +
106	chr2 104206 104332 L2 292 +
107	chr2 104498 104580 MIRb 248 -
108	chr2 105772 105883 L2 270 +
109	chr2 106293 106594 AluSc 2269 +
110	chr2 106705 107055 L2 539 -
111	chr2 107056 107905 MER45B 3388 -
112	chr2 107963 108173 Charlie4a 1340 +
113	chr2 108173 108471 AluSg 2024 +
114	chr2 108471 108687 Charlie4a 1340 +
115	chr2 108706 109100 L2 906 -
116	chr2 109366 109439 HAL1 264 -
117	chr2 109439 109730 AluSx 1921 +
118	chr2 109730 109812 HAL1 264 -
119	chr2 110514 110571 MER5B 225 +
120	chr2 111186 111304 MER94 459 +
121	chr2 111642 111836 MIR 654 -
122	chr2 111936 112346 L2 309 -
123	chr2 112452 112477 (TGAA)n 225 +
124	chr2 112938 113010 MIRb 180 +
125	chr2 115295 115402 MIR 343 +
126	chr2 115424 115551 MIR 412 -
127	chr2 116167 117645 SVA 11488 +
128	chr2 117805 118013 MIRb 306 -
129	chr2 118824 119831 L1PB 5354 -
130	chr2 120000 120038 (TAAA)n 197 +
131	chr2 120670 120807 MER5B 553 +
132	chr2 120921 121233 AluJo 1929 -
133	chr2 122648 122930 AluSp 2141 +
134	chr2 123099 123410 AluJb 1619 +
135	chr2 123519 123681 L1ME3A 325 +
136	chr2 123710 123775 LTR43 242 -
137	chr2 123841 124183 LTR43B 1146 -
138	chr2 124264 124603 L1ME3A 939 +
139	chr2 125097 125705 L1MC1 3512 +
140	chr2 125706 126048 MSTA 2544 +
141	chr2 126048 126347 AluSx 1849 +
142	chr2 126347 126409 MSTA 2544 +
143	chr2 127755 128321 L1MA9 2460 -
144	chr2 128314 128822 L1MA9 1912 +
145	chr2 128822 128844 AT_rich 22 +
146	chr2 128906 129305 MLT1A1 1893 +
147	chr2 131614 132043 MSTA 2057 -
148	chr2 132398 132645 AluY 1947 +
149	chr2 133039 133106 AT_rich 32 +
150	chr2 133111 133341 PABL_A 1802 -
151	chr2 133341 134756 PABL_A-int 10971 -
152	chr2 135007 135054 L2 184 -
153	chr2 135074 135147 L2 249 +
154	chr2 135270 135471 L1MEb 333 -
155	chr2 135510 135690 Tigger1 669 +
156	chr2 135672 135884 Tigger1 1251 +
157	chr2 135884 135947 L1M2 8741 -
158	chr2 135947 136253 AluSp 2298 -
159	chr2 136253 136888 L1M2 8741 -
160	chr2 136888 136922 (TTTA)n 224 +
161	chr2 136922 137816 L1M2 8741 -
162	chr2 137816 138169 THE1B 2055 -
163	chr2 138169 138639 L1M2 8741 -
164	chr2 138641 139121 MER44C 2479 +
165	chr2 139144 139808 MER4A 2394 +
166	chr2 139810 140042 MER44C 1272 +
167	chr2 140046 140215 L1M2 664 -
168	chr2 140215 140675 MER4A1 3468 +
169	chr2 140675 140763 L1M2 664 -
170	chr2 141552 142024 L1MEb 591 -
171	chr2 142058 142213 MER51A 538 +
172	chr2 142215 142519 MER51B 1633 +
173	chr2 142638 142787 HAL1b 319 -
174	chr2 143395 143564 LTR17 1225 -
175	chr2 143580 143698 AluY 902 +
176	chr2 143698 144298 LTR17 4934 -
177	chr2 144298 144589 HERV17 2415 -
178	chr2 144579 144620 HERV17 305 -
179	chr2 144612 148188 HERV17 30373 -
180	chr2 148187 150021 HERV17 13802 -
181	chr2 150021 150782 LTR17 6037 -
182	chr2 151296 151390 L2 190 -
183	chr2 152021 152314 AluJb 1532 +
184	chr2 153860 154064 L3 484 +
185	chr2 154147 155500 L1PA7 7363 +
186	chr2 155550 155627 L4 184 +
187	chr2 156586 156729 MIRb 240 +
188	chr2 157888 159232 L1MC2 4364 +
189	chr2 159933 160007 MIR3 196 +
190	chr2 160097 160129 AT_rich 32 +
191	chr2 160901 160950 (CA)n 378 +
192	chr2 161462 161773 AluY 2636 +
193	chr2 161926 162002 Kanga1 233 -
194	chr2 164118 164211 HAL1 264 +
195	chr2 164330 164435 (CATATA)n 450 +
196	chr2 164435 164679 AluSx 1559 -
197	chr2 164780 164802 AT_rich 22 +
198	chr2 164931 165118 MIRb 183 -
199	chr2 167243 167542 AluSx 1867 +
200	chr2 168414 168510 L1PB1 3181 +
201	chr2 168510 168537 (TA)n 182 +
202	chr2 168537 168572 (CA)n 324 +
203	chr2 168572 168923 L1PB1 3181 +
204	chr2 169914 170344 LTR35-int 677 +
205	chr2 170349 170763 LTR35-int 1559 +
206	chr2 170771 170917 L1PA4 1004 +
207	chr2 170998 172290 LTR57-int 5968 +
208	chr2 171342 173675 LOR1-int 6255 +
209	chr2 173750 173972 LOR1-int 625 +
210	chr2 174098 174198 LTR49-int 367 +
211	chr2 174202 174392 LOR1-int 1108 +
212	chr2 174395 174681 MER49 4056 +
213	chr2 174681 175052 THE1C 2588 +
214	chr2 175052 175497 MER49 4056 +
215	chr2 175684 176055 LOR1-int 351 +
216	chr2 176246 176698 LTR35 736 +
217	chr2 176818 176841 AT_rich 23 +
218	chr2 176990 177493 MLT1F2 1583 +
219	chr2 177497 177522 (CAAAAA)n 225 +
220	chr2 177538 177765 L1MC4 481 +
221	chr2 177880 178397 LTR22C 2762 -
222	chr2 178522 178630 AluJb 728 +
223	chr2 178895 178998 L1M5 261 +
224	chr2 179170 179198 AT_rich 21 +
225	chr2 179978 180161 MER20 331 +
226	chr2 180330 180509 L1MB2 1075 +
227	chr2 180509 181898 LTR12C 8168 -
228	chr2 181898 181924 L1MB2 1075 +
229	chr2 181903 182185 L1MB2 1132 +
230	chr2 182394 182433 (T)n 246 +
231	chr2 182441 182653 AluSg 1644 -
232	chr2 185331 185446 L1M4 246 -
233	chr2 185937 186497 MER92B 900 -
234	chr2 189807 189920 L2 242 +
235	chr2 190069 190208 L2 229 -
236	chr2 190610 190778 MIR 271 -
237	chr2 190936 191064 MIRb 241 +
238	chr2 192383 192531 L1MC4a 279 -
239	chr2 192614 192967 MSTA 1342 +
240	chr2 193615 193737 L1M4 416 -
241	chr2 194139 194517 MSTA 2196 +
242	chr2 195051 195659 MER4B 3688 +
243	chr2 196994 197082 (GGAA)n 1047 +
244	chr2 197082 197262 (GGGA)n 1431 +
245	chr2 197262 197302 (GGAA)n 1047 +
246	chr2 197302 197482 (GGGA)n 1347 +
247	chr2 197482 197502 (GGAA)n 1047 +
248	chr2 197502 197682 (GGGA)n 1368 +
249	chr2 197682 197714 (GGAA)n 1047 +
250	chr2 197714 197752 polypurine 219 +
251	chr2 198076 198423 MLT1A0 1472 +
252	chr2 199454 199677 L2 323 +
253	chr2 199741 199990 L2 449 +
254	chr2 201304 201337 AT_rich 26 +
255	chr2 201543 201737 MIRb 344 -
256	chr2 202374 203301 Tigger1 6366 -
257	chr2 203546 203694 L1MC2 594 -
258	chr2 204844 204905 Alu 426 +
259	chr2 204907 205020 L1MD 245 -
260	chr2 205310 205354 (CA)n 248 +
261	chr2 205572 205611 AT_rich 25 +
262	chr2 205757 206463 L1ME1 2227 -
263	chr2 206478 206741 L1MA4 1087 -
264	chr2 207057 207228 L1M3de 232 -
265	chr2 207784 208051 L2 525 -
266	chr2 208713 208734 AT_rich 21 +
267	chr2 209284 209645 MLT1A0 1607 +
268	chr2 210181 210214 (TAA)n 236 +
269	chr2 211053 211149 MIR 223 -
270	chr2 212441 212529 MER20 473 +
271	chr2 213153 213232 MIRb 221 -
272	chr2 215176 215279 Charlie2 435 -
273	chr2 215309 215572 Charlie2 466 -
274	chr2 215762 215892 L1MC4a 248 +
275	chr2 216077 216489 L1MC4a 421 +
276	chr2 217210 217559 L1MC4a 326 +
277	chr2 217567 217588 AT_rich 21 +
278	chr2 217889 217910 (TG)n 189 +
279	chr2 219447 219753 AluYa5 2878 +
280	chr2 220529 220769 AluSx 1445 -
281	chr2 221199 221228 AT_rich 22 +
282	chr2 221477 221524 (CATATA)n 240 +
283	chr2 222442 222742 L1PA6 2387 -
284	chr2 222746 222958 L1ME4a 234 +
285	chr2 224460 224564 MIRb 253 -
286	chr2 224875 225175 AluSq 2314 -
287	chr2 226239 226463 MIR 272 +
288	chr2 226463 226678 MIR 378 +
289	chr2 227578 227831 L1MA4 1053 +
290	chr2 228067 228259 LTR52 326 +
291	chr2 228259 228303 (TG)n 396 +
292	chr2 228303 228355 LTR52 326 +
293	chr2 229207 229376 MER105 586 +
294	chr2 229713 232723 L1M4b 6457 +
295	chr2 232723 232751 (CAA)n 231 +
296	chr2 232751 233606 L1M4 3745 +
297	chr2 233633 233769 LTR16A1 309 +
298	chr2 233780 233825 MIRb 246 +
299	chr2 234214 234524 AluY 2373 +
300	chr2 234527 234584 (GAAA)n 326 +
301	chr2 234597 234715 MIR 217 -
302	chr2 235457 235691 MIR 371 -
303	chr2 235866 235892 (TAAAAA)n 201 +
304	chr2 235913 236224 AluSq 2400 +
305	chr2 236591 236642 GA-rich 202 +
306	chr2 237758 237789 AT_rich 24 +
307	chr2 241682 241737 MER5A 222 -
308	chr2 242099 242222 MER5A 250 -
309	chr2 243203 243830 MER41B 4374 +
310	chr2 244057 244136 AT_rich 44 +
311	chr2 244592 245160 MER4A 1940 +
312	chr2 245335 245610 AluJo 1518 +
313	chr2 246060 246409 L1ME2 2049 -
314	chr2 246409 246714 AluSq 2369 +
315	chr2 246714 247040 L1ME2 2049 -
316	chr2 247032 247373 L1PREC2 1625 -
317	chr2 247373 247786 MER57B 2701 +
318	chr2 247790 248410 L1PREC2 3920 -
319	chr2 248438 249129 L1MEc 575 -
320	chr2 249353 249388 AT_rich 28 +
321	chr2 249505 249889 L1MC 354 +
322	chr2 253987 254010 GC_rich 23 +
323	chr2 256504 257206 MER44C 3540 -
324	chr2 257237 257619 L2 869 -
325	chr2 257626 257758 MER105 414 -
326	chr2 257758 258055 MER58B 701 -
327	chr2 258065 258208 L2 435 -
328	chr2 259635 259758 MER39 618 +
329	chr2 259816 260040 MER39 688 +
330	chr2 260145 260244 L2 235 +
331	chr2 260590 260618 AT_rich 28 +
332	chr2 260619 260678 MER21C 340 +
333	chr2 260678 260979 MER77 442 +
334	chr2 261078 261136 L2 193 +
335	chr2 261228 261475 MER8 820 +
336	chr2 261491 261567 Charlie9 244 -
337	chr2 263033 263317 MSTD 409 -
338	chr2 263469 263560 MER58A 287 +
339	chr2 263885 264181 AluJo 1552 +
340	chr2 265538 265751 MIR 405 -
341	chr2 265969 265990 AT_rich 21 +
342	chr2 266132 266443 L2 310 +
343	chr2 268083 268107 AT_rich 24 +
344	chr2 272348 272439 L2 215 +
345	chr2 274262 274365 MER5A1 525 -
346	chr2 274737 274812 MIR3 296 +
347	chr2 275187 275231 MIR 229 +
348	chr2 277448 277470 (A)n 198 +
349	chr2 277738 277788 GC_rich 36 +

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root/galaxy-central/test-data/customTrack2.bed

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