root/galaxy-central/test-data/rgtestouts/rgPedSub/rgPedSubtest1.log

リビジョン 2, 0.6 KB (コミッタ: hatakeyama, 14 年 前)

import galaxy-central
行番号 
1config file /share/shared/galaxy/test-data/rgtestouts/rgPedSub/pedsub.script =
2title~~~~rgPedSubtest1
3output1~~~~/share/shared/galaxy/test-data/rgtestouts/rgPedSub/rgPedSubtest1.lped
4outformat~~~~lped
5basename~~~~tinywga
6inped~~~~/share/shared/galaxy/test-data/tinywga
7outdir~~~~/share/shared/galaxy/test-data/rgtestouts/rgPedSub
8region~~~~
9relfilter~~~~all
10rslist~~~~rs2283802Xrs2267000Xrs16997606Xrs4820537Xrs3788347Xrs756632Xrs4820539Xrs2283804Xrs2267006Xrs4822363X
11## rgPedSub.py looking for 10 rs (['rs2283802', 'rs2267000', 'rs16997606', 'rs4820537', 'rs3788347']....etc)
12
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