root/galaxy-central/test-data/rr.csfasta

リビジョン 2, 33.2 KB (コミッタ: hatakeyama, 14 年 前)

import galaxy-central

行番号 
1# Mon Sep 28 22:46:46 2009 /share/apps/corona/bin/filter_fasta.pl --output=/data/results/solid176/solid176_20090923/Somali_Wild_Ass_a/results.01/primary.20090929010043704 --name=solid176_20090923_Somali_Wild_Ass_a --tag=R3 --minlength=50 --mincalls=25 --prefix=G /data/results/solid176/solid176_20090923/Somali_Wild_Ass_a/jobs/postPrimerSetPrimary.849/rawseq
2# Cwd: /state/partition1/home/pipeline
3# Title: solid176_20090923_Somali_Wild_Ass_a
4>853_7_53_R3
5G..1...12.3.023.22.22.2.2..22..2...2222.222.2.2.22.
6>853_7_78_R3
7G..2...02.2.232.22.11.2.2..12..1...2222.222.2.3.22.
8>853_7_88_R3
9G..3...22.2.032.13.22.2.1..23..0...2130.132.1.2.30.
10>853_7_132_R3
11G..2...21.2.200.21.30.1.1..30..0...2112.202.2.0.22.
12>853_7_141_R3
13G..2...13.1.112.22.00.0.0..02..2...2222.200.2.2.22.
14>853_7_146_R3
15G..1...12.2.212.20.11.2.1..12..2...1311.223.1.3.21.
16>853_7_269_R3
17G..1...21.2.212.02.01.2.1..21..3...2210.113.2.3.32.
18>853_7_321_R3
19G..1...01.2.202.10.11.0.2..22..2...0332.111.2.0.22.
20>853_7_386_R3
21G..2...31.2.211.11.31.2.0..31..0...2030.312.1.0.22.
22>853_7_405_R3
23G..2...00.0.002.31.23.0.2..32..3...1032.120.2.1.22.
24>853_7_411_R3
25G..1...00.1.002.02.12.1.2..22..2...1020.312.2.0.21.
26>853_7_445_R3
27G..2...33.0.233.03.31.0.1..13..2...0020.222.2.2.22.
28>853_7_469_R3
29G..1...10.3.313.33.33.0.3..02..1...2333.230.2.3.32.
30>853_7_474_R3
31G..2...03.2.112.23.31.1.2..21..1...2221.322.2.1.21.
32>853_7_497_R3
33G..3...02.2.221.22.12.1.2..13..0...0033.230.2.3.21.
34>853_7_587_R3
35G..0...23.2.030.01.02.0.3..33..3...2101.030.0.2.20.
36>853_7_630_R3
37G..3...01.0.011.10.21.0.3..22..0...2101.020.3.0.01.
38>853_7_655_R3
39G..3...33.3.113.10.20.1.1..02..2...3132.200.1.1.21.
40>853_7_692_R3
41G..0...30.0.300.12.30.1.1..30..2...1022.320.3.3.33.
42>853_7_715_R3
43G..3...22.1.110.22.31.2.2..21..1...1021.330.1.2.31.
44>853_7_719_R3
45G..0...00.3.200.02.30.0.1..20..1...0003.301.2.2.33.
46>853_7_743_R3
47G..3...00.0.201.11.03.2.3..30..2...1112.300.2.2.31.
48>853_7_791_R3
49G..1...00.2.022.02.32.1.3..21..0...0222.120.1.0.22.
50>853_7_801_R3
51G..2...11.1.232.31.01.2.1..22..1...2222.122.2.1.22.
52>853_7_845_R3
53G..3...23.0.310.12.22.2.2..22..2...3232.303.2.2.33.
54>853_7_868_R3
55G..3...21.0.012.11.00.1.2..31..0...0101.022.2.3.03.
56>853_7_1026_R3
57G..2...02.1.333.11.10.2.2..21..3...1323.011.1.2.22.
58>853_7_1057_R3
59G..1...22.3.333.22.22.3.1..12..2...2122.332.1.3.21.
60>853_7_1066_R3
61G..2...22.2.332.12.01.3.0..21..2...0312.122.0.1.02.
62>853_7_1107_R3
63G..1...11.0.223.12.23.2.0..11..1...2012.132.0.3.30.
64>853_7_1179_R3
65G..3...02.1.133.00.21.1.3..20..1...3000.002.3.2.23.
66>853_7_1198_R3
67G..3...21.2.121.00.13.0.3..01..3...1131.330.1.3.01.
68>853_7_1261_R3
69G..0...12.3.202.00.03.2.0..22..0...2112.021.2.3.22.
70>853_7_1321_R3
71G..1...20.0.021.12.10.2.0..20..1...2002.012.2.1.22.
72>853_7_1406_R3
73G..0...11.0.212.11.00.2.0..23..1...2002.102.1.0.30.
74>853_7_1431_R3
75G..3...20.3.020.23.22.2.2..22..1...3302.132.0.2.02.
76>853_7_1439_R3
77G..3...12.2.013.21.20.2.1..21..2...2001.123.0.2.12.
78>853_7_1524_R3
79G..1...22.3.122.01.11.2.3..20..1...3021.103.2.0.32.
80>853_7_1537_R3
81G..0...11.1.233.22.22.1.3..22..2...3311.220.1.2.11.
82>853_7_1592_R3
83G..0...10.1.033.00.33.2.1..11..3...0031.333.0.3.32.
84>853_7_1597_R3
85G..3...00.2.102.11.21.2.1..00..0...0011.000.2.0.00.
86>853_7_1650_R3
87G..3...03.3.203.10.12.0.2..20..2...1113.121.2.1.33.
88>853_7_1790_R3
89G..2...13.3.311.21.13.1.0..11..3...0212.001.0.2.22.
90>853_7_1795_R3
91G..2...02.0.222.13.22.0.1..11..1...1220.213.0.1.20.
92>853_7_1807_R3
93G..3...11.3.213.13.02.1.3..20..1...3031.033.2.1.03.
94>853_7_1872_R3
95G..0...33.0.231.21.10.0.0..03..1...1323.110.0.2.01.
96>853_7_1885_R3
97G..2...33.1.320.12.01.2.0..11..3...1213.332.1.3.20.
98>853_7_1910_R3
99G..3...03.1.331.22.00.2.0..22..2...0120.020.1.2.02.
100>853_8_43_R3
101G.130..11.3.030.30.00.3.2..11..1...3221.22222.2.22.
102>853_8_48_R3
103G.023..11.1.210.22.30.0.0..22..3...2202.22222.2.22.
104>853_8_57_R3
105G.312..02.1.302.20.00.0.0..33..2...3313.22022.3.20.
106>853_8_106_R3
107G.223..02.3.313.23.03.2.0..02..1...2232.22222.2.22.
108>853_8_196_R3
109G.330..21.1.220.33.12.2.2..32..2...2212.22222.2.22.
110>853_8_211_R3
111G.012..11.1.302.10.10.1.2..02..2...2202.22222.2.21.
112>853_8_227_R3
113G.221..02.1.031.02.32.1.0..21..3...2212.30100.2.22.
114>853_8_248_R3
115G.123..02.3.222.22.22.2.2..22..2...2222.32222.2.22.
116>853_8_253_R3
117G.220..00.1.200.22.20.0.0..22..0...3222.32022.2.01.
118>853_8_342_R3
119G.203..21.2.201.01.02.1.2..23..1...0111.22220.2.22.
120>853_8_400_R3
121G.023..30.1.103.10.12.2.1..31..0...1332.10222.0.22.
122>853_8_422_R3
123G.222..11.2.102.31.21.2.2..12..1...2222.22322.1.22.
124>853_8_555_R3
125G.123..30.1.130.01.22.3.0..33..2...1322.30321.0.22.
126>853_8_638_R3
127G.230..00.1.000.21.33.0.3..32..1...3332.33031.3.02.
128>853_8_735_R3
129G.333..30.3.010.21.31.1.1..32..2...2120.20303.3.33.
130>853_8_888_R3
131G.020..30.1.232.03.23.2.2..22..3...1333.23322.2.22.
132>853_8_893_R3
133G.311..13.1.022.23.13.2.2..02..1...2222.22032.2.22.
134>853_8_898_R3
135G.110..33.0.233.22.03.0.3..21..1...3321.23332.0.03.
136>853_8_920_R3
137G.132..13.1.310.20.22.3.3..02..0...1222.23221.3.21.
138>853_8_958_R3
139G.133..23.1.021.12.02.0.1..03..1...1022.03300.1.23.
140>853_8_1076_R3
141G.202..31.0.331.13.02.2.1..23..2...2220.03103.3.33.
142>853_8_1081_R3
143G.311..02.2.013.33.12.0.3..21..0...3023.23223.3.13.
144>853_8_1134_R3
145G.210..12.3.333.11.31.3.3..33..3...2132.22323.3.23.
146>853_8_1157_R3
147G.113..13.1.210.02.30.0.2..03..0...1131.22300.3.32.
148>853_8_1173_R3
149G.123..31.3.102.32.11.1.3..00..0...1201.02202.2.00.
150>853_8_1215_R3
151G.120..31.1.212.20.03.1.0..02..1...0000.30212.1.13.
152>853_8_1223_R3
153G.022..01.0.203.00.12.1.0..22..0...0213.20020.3.02.
154>853_8_1229_R3
155G.123..10.0.032.22.10.3.0..03..3...0300.32013.0.20.
156>853_8_1234_R3
157G.333..20.3.233.21.22.2.2..20..2...0301.23003.3.23.
158>853_8_1255_R3
159G.321..32.1.231.20.12.2.3..31..2...2021.32202.2.22.
160>853_8_1315_R3
161G.122..13.1.232.30.31.0.3..02..2...2300.23122.2.23.
162>853_8_1372_R3
163G.020..01.0.313.03.03.2.2..11..2...2011.20122.2.00.
164>853_8_1461_R3
165G.130..23.0.211.33.31.2.2..01..1...0030.13010.1.22.
166>853_8_1475_R3
167G.031..13.1.301.11.00.1.0..22..2...1200.02001.0.00.
168>853_8_1567_R3
169G.122..22.2.110.33.11.0.2..22..3...0222.21031.3.22.
170>853_8_1662_R3
171G.030..23.0.033.00.01.0.3..11..2...1132.21021.0.20.
172>853_8_1669_R3
173G.023..00.1.000.20.03.0.3..01..0...0333.33320.0.01.
174>853_8_1758_R3
175G.001..13.0.123.11.33.3.0..00..2...3223.32232.1.01.
176>853_8_1764_R3
177G.322..11.0.112.13.22.2.1..02..0...2022.33002.1.22.
178>853_8_1824_R3
179G.010..03.2.232.32.11.3.1..00..2...1002.02103.3.13.
180>853_8_1835_R3
181G.211..22.2.310.12.02.2.0..22..1...2222.12220.2.11.
182>853_8_1917_R3
183G.011..03.2.233.33.32.2.2..22..3...1311.22132.2.02.
184>853_8_1930_R3
185G.230..33.2.200.21.02.1.2..03..2...2220.13110.3.22.
186>853_8_1938_R3
187G.300..33.3.100.13.20.3.2..32..2...3331.13321.3.23.
188>853_8_1984_R3
189G.302..33.2.010.11.12.3.1..23..3...1303.03112.1.22.
190>853_8_2005_R3
191G.010..10.1.212.02.12.1.0..20..3...3223.01201.0.02.
192>853_8_2031_R3
193G.002..03.3.313.13.03.2.2..03..2...11.0.33210.0.12.
194>853_9_6_R3
195G.32...21.1.122.22.22.2.22.22..2..22122222122.2.22.
196>853_9_22_R3
197G.222..22.2.222.12.22.2.22.22..2..22222222222.2.22.
198>853_9_70_R3
199G.330..22.3.200.02.30.3.32.01..0..00002211122.2.32.
200>853_9_120_R3
201G.132..01.2.321.13.03.0.13.22..0..32222222222.2.22.
202>853_9_156_R3
203G.111..32.3.302.10.22.1.03.22..2..00112001122.2.22.
204>853_9_189_R3
205G.333..33.1.022.22.22.0.33.22..2..20230222230.3.20.
206>853_9_243_R3
207G.131..21.3.031.03.12.1.33.22..2..10212222222.1.22.
208>853_9_295_R3
209G.200..02.2.120.22.32.0.11.32..3..12222222222.2.21.
210>853_9_299_R3
211G.100..02.0.211.11.22.2.23.21..2..02222222222.2.22.
212>853_9_311_R3
213G.303..23.0.202.22.21.0.22.11..3..23132321132.1.22.
214>853_9_326_R3
215G.330..21.1.121.11.30.2.01.21..1..21021311332.3.33.
216>853_9_451_R3
217G.203..01.1.003.33.30.2.20.20..2..33103102231.2.00.
218>853_9_485_R3
219G.023..22.3.333.22.12.0.01.00..1..02000132132.3.12.
220>853_9_509_R3
221G.011..01.0.100.02.31.0.21.31..0..10331320303.2.00.
222>853_9_538_R3
223G.322..20.2.212.30.00.1.32.33..3..31300332130.1.23.
224>853_9_548_R3
225G.320..30.2.100.02.33.3.13.13..0..31320203213.2.21.
226>853_9_574_R3
227G.031..33.3.332.31.00.0.00.00..0..01003032220.3.10.
228>853_9_589_R3
229G.331..13.3.100.02.00.0.13.22..0..01101000000.2.00.
230>853_9_595_R3
231G.323..00.1.112.13.02.0.11.22..0..20212112031.0.22.
232>853_9_750_R3
233G.223..31.2.331.23.20.3.02.33..1..32220000001.2.03.
234>853_9_783_R3
235G.132..02.0.302.10.00.2.20.33..3..00011222222.2.23.
236>853_9_814_R3
237G.002..33.3.300.32.31.2.32.12..0..22221121310.1.02.
238>853_9_924_R3
239G.200..12.0.110.00.30.2.21.02..1..01212302222.0.20.
240>853_9_1019_R3
241G.203..11.2.012.00.22.1.31.10..1..30032322222.0.13.
242>853_9_1046_R3
243G.212..11.1.222.33.22.3.10.21..2..21121331133.2.32.
244>853_9_1126_R3
245G.232..31.2.232.22.11.3.32.32..3..22221223221.3.22.
246>853_9_1192_R3
247G.123..12.1.322.23.32.1.01.30..2..11132130123.0.11.
248>853_9_1243_R3
249G.132..33.1.031.11.02.2.22.31..3..23023232301.2.11.
250>853_9_1272_R3
251G.302..20.0.221.10.23.0.00.30..3..03300330011.0.21.
252>853_9_1339_R3
253G.010..33.2.101.23.32.2.22.21..1..21132222321.1.22.
254>853_9_1358_R3
255G.201..30.1.000.30.12.2.00.11..3..10202103212.2.22.
256>853_9_1364_R3
257G.233..30.3.200.22.22.0.32.13..1..20200130210.3.12.
258>853_9_1397_R3
259G.310..01.1.302.20.01.2.10.22..2..31002100302.3.21.
260>853_9_1425_R3
261G.213..21.0.332.22.22.3.10.30..3..23002000023.2.03.
262>853_9_1446_R3
263G.102..12.2.022.33.31.1.33.21..0..01130213112.0.02.
264>853_9_1479_R3
265G.333..13.1.232.01.30.1.02.12..2..22200100132.0.00.
266>853_9_1503_R3
267G.102..20.1.022.13.10.2.01.21..1..02222100100.3.12.
268>853_9_1512_R3
269G.210..01.1.313.01.11.3.30.00..3..30200002000.0.00.
270>853_9_1530_R3
271G.332..31.1.002.33.12.1.33.10..2..30302122021.3.10.
272>853_9_1559_R3
273G.202..03.3.220.12.20.2.13.33..3..20202031031.3.32.
274>853_9_1601_R3
275G.301..31.1.120.22.02.2.22.10..0..13002032122.3.31.
276>853_9_1636_R3
277G.302..12.1.100.31.12.1.23.20..3..31213313232.3.32.
278>853_9_1657_R3
279G.120..23.3.033.01.00.1.31.30..0..21232301301.0.02.
280>853_9_1675_R3
281G.300..30.1.223.11.11.2.33.20..3..23021302112.2.22.
282>853_9_1709_R3
283G.100..11.3.100.00.20.0.02.21..0..00000200300.0.00.
284>853_9_1722_R3
285G.211..31.1.122.11.01.0.10.30..2..03122202213.0.30.
286>853_9_1728_R3
287G.211..20.3.001.21.30.2.01.12..1..20220122000.0.00.
288>853_9_1739_R3
289G.132..01.3.112.13.31.0.30.20..1..31123321133.3.33.
290>853_9_1870_R3
291G.323..23.2.100.01.00.2.13.02..1..00131301001.2.01.
292>853_9_1923_R3
293G.101..03.3.313.21.00.3.00.01..1..31111113211.1.23.
294>853_9_1943_R3
295G.311..23.3.021.33.33.0.10.21..3..00010221332.3.21.
296>853_9_1970_R3
297G.202..10.1.110.22.01.2.31.13..1..31021112122.2.33.
298>853_9_2024_R3
299G.213..02.0.112.23.00.1.32.00..1..11121132311.1.11.
300>853_10_26_R3
301G.222..11.0.112.12.23.1222.020.0.22222222222222.22.
302>853_10_63_R3
303G.232..20.0.301.22.21.2210.120.2.20220212332211.22.
304>853_10_221_R3
305G.011..12.0.133.20.32.2222.222.1.22222223222222.22.
306>853_10_254_R3
307G.220..00.1.200.22.20.0002.222.0.21222213202222.01.
308>853_10_285_R3
309G.112..02.0.203.10.21.2222.203.1.00222233222222.22.
310>853_10_317_R3
311G.223..10.3.003.22.11.3331.302.2.12233301212312.22.
312>853_10_329_R3
313G.030..11.0.121.11.22.2312.213.1.20002102132221.32.
314>853_10_349_R3
315G.311..31.2.312.21.12.2212.232.2.12312032212222.01.
316>853_10_354_R3
317G.332..01.2.022.02.10.0222.112.2.02223232102222.22.
318>853_10_370_R3
319G.300..23.3.212.00.02.2123.322.2.23322223220021.31.
320>853_10_464_R3
321G.222..00.0.012.02.33.1121.010.1.02031212012111.31.
322>853_10_491_R3
323G.202..03.0.331.11.01.1111.111.0.23111222122221.21.
324>853_10_512_R3
325G.210..31.3.002.22.11.0221.112.3.21022233103211.23.
326>853_10_517_R3
327G.202..20.0.320.02.21.2020.022.2.10003031203122.02.
328>853_10_560_R3
329G.002..31.0.122.13.02.2010.220.2.33311223103010.10.
330>853_10_604_R3
331G.301..01.0.013.00.23.2021.230.1.30002020213231.00.
332>853_10_659_R3
333G.032..03.1.003.21.20.0003.230.0.33333232030303.22.
334>853_10_684_R3
335G.133..31.2.020.30.21.3110.230.2.10202321232100.21.
336>853_10_703_R3
337G.132..12.2.132.03.22.2202.300.3.32220020201120.02.
338>853_10_707_R3
339G.130..10.1.022.13.12.2220.221.2.21220202102121.22.
340>853_10_728_R3
341G.033..13.0.111.00.13.3000.010.3.00333322102111.20.
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