root/galaxy-central/tool-data/codingSnps.loc.sample

リビジョン 2, 0.9 KB (コミッタ: hatakeyama, 14 年 前)

import galaxy-central

行番号 
1#This is a sample file distributed with Galaxy that enables tools to use a
2#directory of 2bit genome files for use with codingSnps.  You will need to
3#supply these files and then create a codingSnps.loc file similar to this one
4#(store it in this directory) that points to the directories in which those
5#files are stored.  The codingSnps.loc file has this format (white space
6#characters are TAB characters):
7#
8#<build>        <file_path>
9#
10#So, for example, if your codingSnps.loc began like this:
11#
12#hg18   /galaxy/data/hg18/seq
13#
14#then your /galaxy/data/hg18/seq directory would need to contain the following
15#2bit file:
16#
17#-rw-r--r--   1 g2data   g2data   807604784 Dec  8 13:21 hg18.2bit
18#
19#Your codingSnps.loc file should include an entry per line for each file you
20#have stored that you want to be available.  Note that your files should
21#all have the extension '2bit'.
22#hg18   /galaxy/data/hg18/seq
23#hg19   /galaxy/data/hg19/seq
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