1 | <tables> |
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2 | <!-- Locations of MAF files that have been indexed with bx-python --> |
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3 | <table name="indexed_maf_files"> |
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4 | <columns>name, value, dbkey, species</columns> |
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5 | <file path="tool-data/maf_index.loc" /> |
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6 | </table> |
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7 | <!-- Locations of indexes in the BWA mapper format --> |
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8 | <table name="bwa_indexes"> |
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9 | <columns>name, value</columns> |
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10 | <file path="tool-data/bwa_index.loc" /> |
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11 | </table> |
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12 | <!-- Locations of indexes in the Bowtie mapper format --> |
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13 | <table name="bowtie_indexes"> |
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14 | <columns>name, value</columns> |
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15 | <file path="tool-data/bowtie_indices.loc" /> |
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16 | </table> |
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17 | <!-- Locations of indexes in the BFAST mapper format --> |
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18 | <table name="bfast_indexes" comment_char="#"> |
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19 | <columns>value, dbkey, formats, name, path</columns> |
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20 | <file path="tool-data/bfast_indexes.loc" /> |
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21 | </table> |
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22 | </tables> |
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