root/galaxy-central/tools/emboss_5/emboss_geecee.xml

リビジョン 2, 0.8 KB (コミッタ: hatakeyama, 14 年 前)

import galaxy-central

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1<tool id="EMBOSS: geecee41" name="geecee" version="5.0.0">
2  <description>Calculates fractional GC content of nucleic acid sequences</description>
3  <requirements><requirement type="package" version="5.0.0">emboss</requirement></requirements>
4  <command>geecee -sequence $input1 -outfile $out_file1 -auto</command>
5  <inputs>
6    <param format="data" name="input1" type="data">
7      <label>Sequences</label>
8    </param>
9  </inputs>
10  <outputs>
11    <data format="geecee" name="out_file1" />
12  </outputs>
13  <tests>
14    <test>
15      <param name="input1" value="2.fasta"/>
16      <output name="out_file1" file="emboss_geecee_out.geecee"/>
17    </test>
18  </tests>
19  <help>
20    You can view the original documentation here_.
21   
22    .. _here: http://emboss.sourceforge.net/apps/release/5.0/emboss/apps/geecee.html
23  </help>
24</tool>
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