root/galaxy-central/tools/filters/commWrapper.xml

リビジョン 2, 1.1 KB (コミッタ: hatakeyama, 14 年 前)

import galaxy-central

行番号 
1<tool id="Comm1" name="Find Similarities and Differences">
2  <description>between two queries</description>
3  <command interpreter="perl">commWrapper.pl $input1 $input2 $mode $out_file1</command>
4  <inputs>
5    <param format="tabular" name="input1" type="data" label="Compare Query1"/>
6    <param format="tabular" name="input2" type="data" label="with Query2"/>
7    <param name="mode" type="select" label="And find">
8      <option value="-23">Lines unique to Query1</option>
9      <option value="-12">Lines shared between Query1 and Query2</option>
10    </param>
11  </inputs>
12  <outputs>
13    <data format="input" name="out_file1" metadata_source="input1" />
14  </outputs>
15  <help>
16This tool is based on UNIX shell command comm. It compares two queries and returns similarities or differences. For example, if you have two queries::
17 
18 a  1
19 b  2
20 c  3
21
22and::
23
24 a  1
25 f  6
26 h  8
27
28Using this tool with **Lines unique to Query1** option will return::
29
30 b  2
31 c  3
32
33If you use **Lines shared between Query1 and Query2** option output will look like this::
34
35 a  1
36
37</help>
38</tool>
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