1 | <tool id="maf_limit_size1" name="Filter MAF blocks" version="1.0.1">
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2 | <description>by Size</description>
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3 | <command interpreter="python">maf_limit_size.py $input1 $out_file1 $min_size $max_size</command>
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4 | <inputs>
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5 | <page>
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6 | <param format="maf" name="input1" label="MAF File" type="data"/>
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7 | <param name="min_size" label="Minimum Size" value="0" type="integer"/>
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8 | <param name="max_size" label="Maximum Size" value="0" type="integer" help="A maximum size less than 1 indicates no limit"/>
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9 | </page>
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10 | </inputs>
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11 | <outputs>
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12 | <data format="maf" name="out_file1" />
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13 | </outputs>
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14 | <tests>
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15 | <test>
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16 | <param name="input1" value="3.maf" ftype="maf" />
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17 | <param name="min_size" value="0"/>
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18 | <param name="max_size" value="0"/>
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19 | <output name="out_file1" file="maf_limit_size1_out.maf" />
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20 | </test>
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21 | </tests>
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22 | <help>
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23 |
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24 | **What it does**
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25 |
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26 | This tool takes a MAF file and a size range and extracts the MAF blocks which fall within the specified range.
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27 | </help>
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28 | </tool>
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