1 | /* |
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2 | * To change this license header, choose License Headers in Project Properties. |
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3 | * To change this template file, choose Tools | Templates |
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4 | * and open the template in the editor. |
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5 | */ |
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6 | |
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7 | package org.biohackathon.SPARQLBuilder.www; |
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8 | |
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9 | import java.io.IOException; |
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10 | import java.io.PrintWriter; |
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11 | import java.util.*; |
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12 | import javax.json.*; |
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13 | import javax.servlet.ServletException; |
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14 | import javax.servlet.annotation.WebServlet; |
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15 | import javax.servlet.http.HttpServlet; |
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16 | import javax.servlet.http.HttpServletRequest; |
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17 | import javax.servlet.http.HttpServletResponse; |
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18 | import javax.servlet.http.HttpSession; |
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19 | import org.biohackathon.SPARQLBuilder.OWL.*; |
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20 | |
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21 | /** |
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22 | * |
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23 | * @author atsuko |
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24 | */ |
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25 | @WebServlet(name = "CLServlet", urlPatterns = {"/clist"}) |
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26 | public class CLServlet extends HttpServlet { |
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27 | |
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28 | private static final String FILENAME = "cdata/"; |
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29 | |
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30 | /** |
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31 | * Processes requests for both HTTP <code>GET</code> and <code>POST</code> |
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32 | * methods. |
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33 | * |
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34 | * @param request servlet request |
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35 | * @param response servlet response |
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36 | * @throws ServletException if a servlet-specific error occurs |
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37 | * @throws IOException if an I/O error occurs |
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38 | */ |
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39 | protected void processRequest(HttpServletRequest request, HttpServletResponse response) |
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40 | throws ServletException, IOException { |
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41 | response.setContentType("text/html;charset=UTF-8"); |
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42 | try (PrintWriter out = response.getWriter()) { |
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43 | /* TODO output your page here. You may use following sample code. */ |
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44 | out.println("<!DOCTYPE html>"); |
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45 | out.println("<html>"); |
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46 | out.println("<head>"); |
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47 | out.println("<title>Servlet CLServlet</title>"); |
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48 | out.println("</head>"); |
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49 | out.println("<body>"); |
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50 | out.println("<h1>Servlet CLServlet at " + request.getContextPath() + "</h1>"); |
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51 | out.println("</body>"); |
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52 | out.println("</html>"); |
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53 | } |
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54 | } |
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55 | |
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56 | // <editor-fold defaultstate="collapsed" desc="HttpServlet methods. Click on the + sign on the left to edit the code."> |
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57 | /** |
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58 | * Handles the HTTP <code>GET</code> method. |
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59 | * |
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60 | * @param request servlet request |
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61 | * @param response servlet response |
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62 | * @throws ServletException if a servlet-specific error occurs |
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63 | * @throws IOException if an I/O error occurs |
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64 | */ |
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65 | @Override |
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66 | protected void doGet(HttpServletRequest request, HttpServletResponse response) |
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67 | throws ServletException, IOException { |
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68 | //processRequest(request, response); |
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69 | response.setContentType("application/json;charset=UTF-8"); |
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70 | response.setHeader("Access-Control-Allow-Origin", "*"); |
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71 | response.setHeader("Access-Control-Allow-Methods", "GET"); |
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72 | response.setHeader("Access-Control-Allow-Headers", request.getHeader("Access-Control-Request-Headers")); |
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73 | response.setHeader("Access-Control-Max-Age", "-1"); |
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74 | PrintWriter out = response.getWriter(); |
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75 | String ep = request.getParameter("ep"); |
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76 | HttpSession session = request.getSession(); |
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77 | QueryPathGenerator qpg = (QueryPathGenerator)session.getAttribute("qpg"); |
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78 | if ( qpg == null ){ |
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79 | qpg = new QueryPathGenerator(); |
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80 | } |
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81 | SortedSet<String> sortedClasses = new TreeSet<String>(); // display + url |
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82 | qpg.setSPARQLendpoint(ep); |
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83 | //OWLClassGraph ocg = qpg.getOWLClassGraph(); |
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84 | SClass[] classes = qpg.getClasses(null); |
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85 | for (int i = 0 ; i < classes.length; i++ ){ |
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86 | String uri = classes[i].getClassURI(); |
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87 | //if ( ocg.getNumberOfEdge(uri) == 0 ){ |
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88 | // continue; |
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89 | //} |
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90 | Label[] labels = classes[i].getLabels(); |
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91 | String label = null; |
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92 | for ( int j = 0 ; j < labels.length; j++ ){ |
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93 | if ( labels[j].getLanguage() == null ){ |
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94 | label = labels[j].getLabel(); break; |
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95 | }else if ( labels[j].getLanguage().equals("en") ){ |
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96 | label = labels[j].getLabel(); break; |
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97 | } |
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98 | } |
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99 | if ( label == null ){ |
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100 | String[] uris = uri.split("/"); |
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101 | String tmplabel = uris[uris.length-1]; |
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102 | String[] tmplabel2 = tmplabel.split("#"); |
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103 | label = tmplabel2[tmplabel2.length-1]; |
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104 | } |
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105 | StringBuilder classbuilder = new StringBuilder(label); |
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106 | classbuilder.append(" "); |
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107 | classbuilder.append(classes[i].getNumOfInstances()); |
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108 | classbuilder.append(" "); |
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109 | classbuilder.append(uri); |
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110 | sortedClasses.add(classbuilder.toString()); |
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111 | } |
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112 | JsonBuilderFactory jbfactory = Json.createBuilderFactory(null); |
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113 | JsonArrayBuilder jab = jbfactory.createArrayBuilder(); |
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114 | Iterator<String> cit = sortedClasses.iterator(); |
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115 | while( cit.hasNext() ){ |
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116 | JsonObjectBuilder job = jbfactory.createObjectBuilder(); |
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117 | String classinfo = cit.next(); |
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118 | String[] data = classinfo.split(" "); |
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119 | if (data.length != 3 ){ |
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120 | System.out.println("data is wrong?"); |
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121 | } |
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122 | job.add("uri", data[2]); |
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123 | job.add("label", data[0]); |
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124 | job.add("number", data[1]); |
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125 | jab.add(job); |
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126 | } |
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127 | JsonArray ja = jab.build(); |
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128 | out.print(ja); |
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129 | } |
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130 | |
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131 | /** |
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132 | * Handles the HTTP <code>POST</code> method. |
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133 | * |
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134 | * @param request servlet request |
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135 | * @param response servlet response |
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136 | * @throws ServletException if a servlet-specific error occurs |
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137 | * @throws IOException if an I/O error occurs |
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138 | */ |
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139 | @Override |
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140 | protected void doPost(HttpServletRequest request, HttpServletResponse response) |
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141 | throws ServletException, IOException { |
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142 | processRequest(request, response); |
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143 | } |
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144 | |
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145 | /** |
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146 | * Returns a short description of the servlet. |
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147 | * |
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148 | * @return a String containing servlet description |
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149 | */ |
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150 | @Override |
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151 | public String getServletInfo() { |
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152 | return "Short description"; |
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153 | }// </editor-fold> |
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154 | |
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155 | } |
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