チェンジセット 36 : BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder

更新日時:

2014/01/31 11:17:26 (11 年 前)

更新者:

nori

ログメッセージ:

SPARQLクエリの整形

パス:

BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL

ファイル:

• OWLQueryBuilder.java (変更) (2 diff)
• OWLQueryBuilderImpl.java (変更) (10 diff)

BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/OWLQueryBuilder.java

@@ -82 +82 @@
 
         public Path[] getPaths(String startClass, String endClass, int mode, boolean countLinks) throws Exception;
+
         public String createSPARQL(Path path) throws Exception;
 
@@ -103 +104 @@
  InstanceLink[] getNextInstancesViaInstanceLink(String[] graphURIs, String originInstance,
                         int limit) throws Exception;
-        public LabelMap[] getLabels(String[] graphURIs, String[] resourceURIs, String language) throws Exception;
-        public ClassLink[] countLinks(String[] graphURIs, String startClassURI,
+
+ public LabelMap[] getLabels(String[] graphURIs, String[] resourceURIs, String language) throws Exception;
+
+ public ClassLink[] countLinks(String[] graphURIs, String startClassURI,
                         ClassLink[] classLinks) throws Exception;
 

BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/OWLQueryBuilderImpl.java

@@ -52 +52 @@
          */
         public static void main(String[] args) throws Exception {
-                String sparqlEndpoint = "http://dbpedia.org/sparql";
-                // String sparqlEndpoint = "http://lsd.dbcls.jp/sparql";
-                String keyword = "artiste";
-                // String keyword = "Agent";
+                // String sparqlEndpoint = "http://dbpedia.org/sparql";
+                String sparqlEndpoint = "http://lsd.dbcls.jp/sparql";
+                // String keyword = "artiste";
+                String keyword = "EnglishCode";
                 String[] graphURIs = new String[0];
+
+                keyword = null;
 
                 OWLQueryBuilder builder = new OWLQueryBuilderImpl(sparqlEndpoint);
@@ -67 +69 @@
                         System.out.println(cls);
                 }
-                
-
-/*
-                System.out.println("CLS");
- 
-                ClassLink[] cls = builder.getNextClass(null, clz[1].getClassURI(), 100,
+
+                System.out.println("CLS");
+
+                ClassLink[] cls = builder.getNextClass(null, clz[0].getClassURI(), 100,
                                 false);
                 if (cls != null) {
@@ -78 +78 @@
                                 System.out.println(cl.toString());
                         }
-                        cls = builder.countLinks(null, clz[1].getClassURI(), cls);
+                        cls = builder.countLinks(null, clz[0].getClassURI(), cls);
                         for (ClassLink cl : cls) {
                                 System.out.println(cl.toString());
                         }
                 }
-*/
+
+                System.out.println("CLS-INS");
+                cls = builder.getNextClassViaInstanceLink(null, clz[0].getClassURI(),
+                                100);
+                if (cls != null) {
+                        for (ClassLink cl : cls) {
+                                System.out.println(cl.toString());
+                        }
+                }
+
+                System.out.println("Instances");
+                Instance[] ins = builder.getInstances(null, "\"A.C. Reed\"@en");
+                if (ins != null) {
+                        for (Instance in : ins) {
+                                System.out.println(in.toString());
+                        }
+                }
+
                 /*
-                 * System.out.println("CLS-INS"); cls =
-                 * builder.getNextClassViaInstanceLink(null, clz[0].getClassURI(), 100);
-                 * if( cls != null ){ for( ClassLink cl: cls){
-                 * System.out.println(cl.toString()); } }
-                 * 
-                 * System.out.println("Instances"); Instance[] ins =
-                 * builder.getInstances(null, "\"A.C. Reed\"@en"); if( ins != null ){
-                 * for( Instance in: ins){ System.out.println(in.toString()); } }
-                 * 
-                 * 
                  * System.out.println("INS-INS"); ins = builder.getInstances(null,
                  * "\"A.C. Reed\"@en"); InstanceLink[] iLinks =
@@ -100 +107 @@
                  * ins[0].getInstanceURI(), 100);
                  * 
-                 * 
-                 * 
-                 * if( iLinks != null ){ for( InstanceLink in: iLinks){
+                 * if (iLinks != null) { for (InstanceLink in : iLinks) {
                  * System.out.println(in.toString()); } }
                  */
@@ -142 +147 @@
 
                 queryStr.append(" {?c rdf:type rdfs:Class} UNION {?c rdf:type owl:Class}\n");
-
-                queryStr.append("      ?c rdfs:label ?label.\n");
-                queryStr.append("      ?c rdfs:label ?pLabel.\n");
+//              queryStr.append("  ?i rdf:type ?c.\n");
+
+
+                
+                if (countInstances) {
+                        queryStr.append("  ?c rdfs:label ?label.\n");
+                }
+                queryStr.append("  ?c rdfs:label ?pLabel.\n");
                 if (countInstances) {
                         queryStr.append("      ?i rdf:type ?c.\n");
@@ -156 +166 @@
                         queryStr.append(keyword);
                         queryStr.append("\" , \"i\" )\n");
-                        queryStr.append("  )");
+                        queryStr.append("  )\n");
                 }
                 if (countInstances) {
-                        queryStr.append("\n}  GROUP BY ?c ?pLabel");
+                        queryStr.append("}  GROUP BY ?c ?pLabel");
                 } else {
-                        queryStr.append("\n}");
+                        queryStr.append("}");
                 }
                 System.out.println(queryStr.toString());
@@ -177 +187 @@
                                 String uri = res.getURI();
                                 int numOfInstances = 0;
-                                if( countInstances ){
+                                if (countInstances) {
                                         numOfInstances = sol.getLiteral("numOfInstances").getInt();
                                 }
@@ -493 +503 @@
         }
 
-        public Path[] getPaths(String startClass, String endClass, int mode, boolean countLinks) throws Exception {
+        public Path[] getPaths(String startClass, String endClass, int mode,
+                        boolean countLinks) throws Exception {
                 OWLClassGraph graph = new OWLClassGraph(startClass, endClass);
                 return graph.getPaths(this, mode, countLinks);
@@ -748 +759 @@
         }
 
-        public SClass[] countInstances(String[] graphURIs, SClass[] classes) throws Exception{
-                if( classes == null || classes.length == 0 ){
+        public SClass[] countInstances(String[] graphURIs, SClass[] classes)
+                        throws Exception {
+                if (classes == null || classes.length == 0) {
                         return new SClass[0];
                 }
                 HashMap<String, SClass> classMap = new HashMap<String, SClass>();
-                for(SClass sc: classes){
+                for (SClass sc : classes) {
                         classMap.put(sc.getClassURI(), sc);
                 }
@@ -803 +815 @@
                 }
                 qexec.close();
-        
+
                 return classes;
         }