チェンジセット 90 : BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/OWLClassGraph.java

更新日時:

2014/07/01 14:19:29 (10 年 前)

更新者:

atsuko

ログメッセージ:

Latest version of OWLClassGraph.java

ファイル:

• BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/OWLClassGraph.java (変更) (5 diff)

BH13SPARQLBuilder/src/org/biohackathon/SPARQLBuilder/OWL/OWLClassGraph.java

@@ -35 +35 @@
         }
         
-        public LinkAndPath(ClassLink classLink, List<ClassLink> path, String orinalClassURI, boolean converge){
+        public LinkAndPath(ClassLink classLink, List<ClassLink> path, String originalClassURI, boolean converge){
            this.classLink = classLink;
            this.path = path;
@@ -49 +49 @@
         this.endClass = endClass;
         addNode(endClass);
-        nsteps = 3;
+        nsteps = 10;
         limit = 1000;
-        th = 0;
-        concut = 2.0;
-        divcut = - 2.0;
+        //th = 0;
+        //concut = 2.0;
+        //divcut = - 2.0;
     }
         
@@ -83 +83 @@
     private List<List<ClassLink>> searchPaths(RDFSchemaAnalyzer rdfsa, boolean countLinks){
         List<List<ClassLink>> paths = new ArrayList<>();
-        ClassLink crrLink = new ClassLink(null,startClass,Direction.both,0,0,0,0,0);
         List<LinkAndPath> lp = new LinkedList<>();
-        lp.add(new LinkAndPath(crrLink, new LinkedList<ClassLink>()));
+        lp.add(new LinkAndPath(new ClassLink("",startClass,Direction.both,0,0,0,0,0), new LinkedList<ClassLink>(), "", false));
         try{
           for ( int i = 0; i < nsteps; i++ ){
@@ -92 +91 @@
               while ( lit.hasNext() ){
                   LinkAndPath crrlp = lit.next();
-                  ClassLink[] classLinks = null;
-                  classLinks = rdfsa.getNextClass(null, crrlp.classLink.getLinkedClassURI(), limit, countLinks);
+                  ClassLink[] classLinks = rdfsa.getNextClass(null, crrlp.classLink.getLinkedClassURI(), limit, countLinks);
                   for ( int j = 0 ; j < classLinks.length; j++ ){
                       List<ClassLink> crrpath = new LinkedList<>(crrlp.path);
@@ -104 +102 @@
                           continue;
                       }
-                      nextlp.add(new LinkAndPath(classLinks[j],crrpath));
+                      if ( crrlp.classLink.getPropertyURI().equals(classLinks[j].getPropertyURI()) &&
+                           crrlp.classLink.getDirection() != classLinks[j].getDirection() &&
+                           crrlp.originalClassURI.equals( classLinks[j].getLinkedClassURI()) ){
+                          continue;
+                      }
+                      
+                      nextlp.add(new LinkAndPath(classLinks[j], crrpath, crrlp.classLink.getLinkedClassURI(), false));
                   }
               }