| 1 | <%inherit file="/base.mako"/> |
|---|
| 2 | <%def name="title()">Custom Database Builds</%def> |
|---|
| 3 | |
|---|
| 4 | <style type="text/css"> |
|---|
| 5 | th, td { |
|---|
| 6 | min-width: 100px; |
|---|
| 7 | vertical-align: text-top; |
|---|
| 8 | } |
|---|
| 9 | pre { |
|---|
| 10 | padding: 0; |
|---|
| 11 | margin: 0; |
|---|
| 12 | } |
|---|
| 13 | </style> |
|---|
| 14 | |
|---|
| 15 | <script type="text/javascript"> |
|---|
| 16 | |
|---|
| 17 | $(function() { |
|---|
| 18 | $(".db_hide").each(function() { |
|---|
| 19 | var pre = $(this); |
|---|
| 20 | pre.hide(); |
|---|
| 21 | pre.siblings("span").wrap( "<a href='javascript:void(0);'></a>" ).click( function() { |
|---|
| 22 | pre.toggle(); |
|---|
| 23 | }); |
|---|
| 24 | }); |
|---|
| 25 | }); |
|---|
| 26 | |
|---|
| 27 | </script> |
|---|
| 28 | |
|---|
| 29 | % if message: |
|---|
| 30 | <div class="errormessagelarge">${message}</div> |
|---|
| 31 | % elif lines_skipped > 0: |
|---|
| 32 | <div class="warningmessagelarge">Skipped ${lines_skipped} lines that could not be parsed</div> |
|---|
| 33 | % endif |
|---|
| 34 | |
|---|
| 35 | <h2>Custom Database/Builds</h2> |
|---|
| 36 | |
|---|
| 37 | <p>You may specify your own database/builds here.</p> |
|---|
| 38 | |
|---|
| 39 | % if dbkeys: |
|---|
| 40 | <table class="colored" cellspacing="0" cellpadding="0"> |
|---|
| 41 | <tr class="header"> |
|---|
| 42 | <th>Name</th> |
|---|
| 43 | <th>Key</th> |
|---|
| 44 | <th>Number of Chroms</th> |
|---|
| 45 | <th></th> |
|---|
| 46 | </tr> |
|---|
| 47 | % for key, dct in dbkeys.iteritems(): |
|---|
| 48 | <tr> |
|---|
| 49 | <td>${dct['name'] | h}</td> |
|---|
| 50 | <td>${key | h}</td> |
|---|
| 51 | <td> |
|---|
| 52 | ## <span>${len(dct["chroms"])} entries</span> |
|---|
| 53 | ## <pre id="pre_${key}" class="db_hide"> |
|---|
| 54 | ## <table cellspacing="0" cellpadding="0"> |
|---|
| 55 | ## <tr><th>Chrom</th><th>Length</th></tr> |
|---|
| 56 | ## % for chrom, chrom_len in dct["chroms"].iteritems(): |
|---|
| 57 | ## <tr><td>${chrom | h}</td><td>${chrom_len | h}</td></tr> |
|---|
| 58 | ## % endfor |
|---|
| 59 | ## </table> |
|---|
| 60 | ## </pre> |
|---|
| 61 | % if 'count' in dct: |
|---|
| 62 | ${dct['count']} |
|---|
| 63 | % endif |
|---|
| 64 | </td> |
|---|
| 65 | <td><form action="dbkeys" method="post"><input type="hidden" name="key" value="${key}" /><input type="submit" name="delete" value="Delete" /></form></td> |
|---|
| 66 | </tr> |
|---|
| 67 | % endfor |
|---|
| 68 | </table> |
|---|
| 69 | % else: |
|---|
| 70 | <p>You currently have no custom builds.</p> |
|---|
| 71 | % endif |
|---|
| 72 | <br /> |
|---|
| 73 | <form action="dbkeys" method="post" enctype="multipart/form-data"> |
|---|
| 74 | <div class="toolForm"> |
|---|
| 75 | <div class="toolFormTitle">Add a Build</div> |
|---|
| 76 | <div class="toolFormBody"> |
|---|
| 77 | <div class="form-row"> |
|---|
| 78 | <label for="name">Name (eg: Human Chromosome):</label> |
|---|
| 79 | <input type="text" id="name" name="name" /> |
|---|
| 80 | </div> |
|---|
| 81 | <div class="form-row"> |
|---|
| 82 | <label for="key">Key (eg: hg18):</label> |
|---|
| 83 | <input type="text" id="key" name="key" /> |
|---|
| 84 | </div> |
|---|
| 85 | <div class="form-row"> |
|---|
| 86 | <label for="len_file">Chromosome Length file upload (.len file):</label> |
|---|
| 87 | <input type="file" id="len_file" name="len_file" /><br /> |
|---|
| 88 | <label for="len_text">Alternatively, paste length info:</label> |
|---|
| 89 | <textarea id="len_text" name="len_text" cols="40" rows="10"></textarea> |
|---|
| 90 | </div> |
|---|
| 91 | |
|---|
| 92 | <div class="form-row"><input type="submit" name="add" value="Submit"/></div> |
|---|
| 93 | </div> |
|---|
| 94 | </div> |
|---|
| 95 | </form> |
|---|